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Carg25323 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25323
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionABC-type Co2+ transport system
Genome locationCarg_Chr19:1376187..1377549
RNA-Seq ExpressionCarg25323
SyntenyCarg25323
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011352.1 hypothetical protein SDJN02_26257, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-5499.16Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDS KSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
KAG7011353.1 hypothetical protein SDJN02_26258, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-66100Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKALLKFLPHEHTEMCILE
        SQIIKDHESSTSRLEKRFKALLKFLPHEHTEMCILE
Subjt:  SQIIKDHESSTSRLEKRFKALLKFLPHEHTEMCILE
XP_022963849.1 uncharacterized protein LOC111464038 isoform X1 [Cucurbita moschata]4.1e-55100Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
XP_022963851.1 uncharacterized protein LOC111464038 isoform X2 [Cucurbita moschata]4.1e-55100Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
XP_022967652.1 uncharacterized protein LOC111467096 [Cucurbita maxima]7.7e-5498.32Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTP PATDSPKSAIFNRKINSNGNKFSSPENTNIVKNR PAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
TrEMBL top hitse value%identityAlignment
A0A1S3CDQ6 uncharacterized protein LOC103499240 isoform X16.0e-4484.87Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKR  TRRSSAAELLETPP TP PATDSPKSAIFNRK NS G KFSSPENTNI KN+VPAGLFKS  RNASSLS+ISDLKDFA+SQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQI+KD +SS SRL+KRFK
Subjt:  SQIIKDHESSTSRLEKRFK
A0A5D3DBU5 Uncharacterized protein6.0e-4484.87Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKR  TRRSSAAELLETPP TP PATDSPKSAIFNRK NS G KFSSPENTNI KN+VPAGLFKS  RNASSLS+ISDLKDFA+SQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQI+KD +SS SRL+KRFK
Subjt:  SQIIKDHESSTSRLEKRFK
A0A6J1HH77 uncharacterized protein LOC111464038 isoform X22.0e-55100Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
A0A6J1HLD9 uncharacterized protein LOC111464038 isoform X12.0e-55100Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
A0A6J1HRE1 uncharacterized protein LOC1114670963.7e-5498.32Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTP PATDSPKSAIFNRKINSNGNKFSSPENTNIVKNR PAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFK
        SQIIKDHESSTSRLEKRFK
Subjt:  SQIIKDHESSTSRLEKRFK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAGAGGAGTCGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCACCGTCGACGCCACTTCCGGCCACCGATTCTCCAAAGTCAGCGATCTTCAA
CAGAAAAATTAACAGCAATGGAAACAAGTTTTCTTCACCAGAGAACACCAACATTGTGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCGCCTTCTCGAAATGCTTCGA
GTCTGAGCACTATATCTGATCTCAAGGATTTTGCGGCTTCACAACTCCTCGATCTCAAGCGCCACATTGATCATTCTCACTCGCAAATAATCAAAGATCATGAATCCTCA
ACCTCCCGCCTCGAAAAGCGATTTAAGGCTTTATTGAAGTTCTTGCCACATGAACACACGGAGATGTGCATTCTCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAGAGGAGTCGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCACCGTCGACGCCACTTCCGGCCACCGATTCTCCAAAGTCAGCGATCTTCAA
CAGAAAAATTAACAGCAATGGAAACAAGTTTTCTTCACCAGAGAACACCAACATTGTGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCGCCTTCTCGAAATGCTTCGA
GTCTGAGCACTATATCTGATCTCAAGGATTTTGCGGCTTCACAACTCCTCGATCTCAAGCGCCACATTGATCATTCTCACTCGCAAATAATCAAAGATCATGAATCCTCA
ACCTCCCGCCTCGAAAAGCGATTTAAGGCTTTATTGAAGTTCTTGCCACATGAACACACGGAGATGTGCATTCTCGAG
Protein sequenceShow/hide protein sequence
MGKKRSRTRRSSAAELLETPPSTPLPATDSPKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSHSQIIKDHESS
TSRLEKRFKALLKFLPHEHTEMCILE