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Carg25382 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25382
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:5232313..5235932
RNA-Seq ExpressionCarg25382
SyntenyCarg25382
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]5.1e-3484.91Show/hide
Query:  IDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEV
        IDMSRN S R SD ++ SASLSLLFVSALS+DSS KDS +SG H SS S TGSMVAIILLG LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEV
Subjt:  IDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

KAG6577362.1 Elongation factor 1-gamma 3, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3684.21Show/hide
Query:  FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFL--------
        FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFL        
Subjt:  FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFL--------

Query:  -VVVLLSFFLFKLW
          V +++F + K W
Subjt:  -VVVLLSFFLFKLW

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-60100Show/hide
Query:  FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFF
        FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFF
Subjt:  FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFF

Query:  LFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]3.0e-3486.54Show/hide
Query:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MSRNLS R SD ++ SASLSLLFVSALS+DSS KDSINSG H SS S TGSMVAIILLG LV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_022929545.1 uncharacterized protein LOC111436082 [Cucurbita moschata]3.0e-42100Show/hide
Query:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein2.5e-3484.91Show/hide
Query:  IDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEV
        IDMSRN S R SD ++ SASLSLLFVSALS+DSS KDS +SG H SS S TGSMVAIILLG LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEV
Subjt:  IDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

A0A1S4DZ07 uncharacterized protein LOC1034933151.5e-3486.54Show/hide
Query:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MSRNLS R SD ++ SASLSLLFVSALS+DSS KDSINSG H SS S TGSMVAIILLG LV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A5A7V4C4 Uncharacterized protein3.6e-2589.74Show/hide
Query:  LSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LS+DSS KDSINSG H SS S TGSMVAIILLG LV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360821.5e-42100Show/hide
Query:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A6J1J6C2 uncharacterized protein LOC1114829871.5e-42100Show/hide
Query:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein1.2e-2061.36Show/hide
Query:  ASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        AS+ L F   LS DS   ++    +  +SSSKTG+ V ++L+GF+ V + SFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  ASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.1 unknown protein1.0e-1962.22Show/hide
Query:  LSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L AS+ L F   +S D +   +    +  +SSSKTG+ V  ILLGF  V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  LSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein3.2e-1856.25Show/hide
Query:  VALSASLSLLFVSA----LSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        + L   L++L++ +    +S D +   +    +  +SSSKTG+ V  ILLGF  V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  VALSASLSLLFVSA----LSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT3G53490.1 unknown protein2.0e-0439.76Show/hide
Query:  VSALSNDSSG--KDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        V A SN  SG  K+    G H         ++ ++LLG + V LL    +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  VSALSNDSSG--KDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCCCTTCAACTTCTTCCATTTCTCTACTGCCAGCGATCGAGCGTTTCAATTTGTTGCGGAGGTTCTAGATACGGATAGTCAGACAATCGATATGAGCAGAAATTTGAG
TCGCAGATCGTCTGATTTGGTTGCGCTTTCCGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTAATGATTCCAGTGGCAAAGATAGTATTAACTCCGGGAAGCATT
CATCCTCAAGCAGCAAAACTGGCTCTATGGTTGCCATCATCCTCCTTGGGTTTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGCTATGGCAGAAGAAGAGAAGA
GAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTCGAACTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
TTTCCCTTCAACTTCTTCCATTTCTCTACTGCCAGCGATCGAGCGTTTCAATTTGTTGCGGAGGTTCTAGATACGGATAGTCAGACAATCGATATGAGCAGAAATTTGAG
TCGCAGATCGTCTGATTTGGTTGCGCTTTCCGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTAATGATTCCAGTGGCAAAGATAGTATTAACTCCGGGAAGCATT
CATCCTCAAGCAGCAAAACTGGCTCTATGGTTGCCATCATCCTCCTTGGGTTTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGCTATGGCAGAAGAAGAGAAGA
GAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTCGAACTTGGTCTTCGGGATTGAAGAATATCTGAAATTCTAGTTCACTGAAGCTG
GATCTGAGAATCTCTCAATCGACCCGACACTCTGCTGGCTTTTTTCACAGGCTCAGAAACCATTATGTTGGAATTATTGCATTTCAAATGGCTAAAAGATGGTGAGATGA
TAGCTTGAGTTTGCTGTAAGGTTAGATTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRR
EEQYARLLKLFEEDDELEVELGLRD