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Carg25387 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25387
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIdentified as a screen for stress-responsive genes.
Genome locationCarg_Chr16:5258611..5259141
RNA-Seq ExpressionCarg25387
SyntenyCarg25387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060595.1 hypothetical protein E6C27_scaffold22G004710 [Cucumis melo var. makuwa]2.6e-4672.16Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEE-DEYGGEVSARAAALSRNNSVSSSVS
        MAD YSKIKAACKFKSRSIDYSDL+SLPHS  FN  AAVSNP SH SN ++TNR     H RLPEE+EE  ++E D   G     AA LSRN+SVSSSVS
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEE-DEYGGEVSARAAALSRNNSVSSSVS

Query:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACK
        GF SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDE+E GDSKE  K GGS    KKKKK N+AGKIVRA +
Subjt:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACK

KAG7015455.1 hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-84100Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
        VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

KAG7031359.1 hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-4871.02Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MAD+YSKI+AACK KSRS+DYSDL+SLPHS RF  AAA SNPNS DS++N+TNR  SR P      EEEEDEY    +A A+ L RN SVS+S SGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
        VKRALSMRRSSSVAERY RIHDQF TLASPIDDDE+E  +SKE R  GGSV    +KKK N+AGKIVRACKRLFG+
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

XP_022136741.1 uncharacterized protein LOC111008371 [Momordica charantia]6.0e-5171.67Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+AGKIVRACKRLFG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

XP_022929198.1 uncharacterized protein LOC111435863 [Cucurbita moschata]6.0e-8399.43Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
        VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSA KIVRACKRLFGI
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

TrEMBL top hitse value%identityAlignment
A0A0A0L2N9 Uncharacterized protein5.3e-4568.33Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAA KFKSRSIDYSDL+SLPHS  F  +AAVSNP        +TNR     H RLPEE+EE  ++E +     +  AA L RN+SVSSSVSG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
        F SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDEME GD KE  K GGS +  KKKKKKN+A KIVRACKR+FG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

A0A2N9II75 Uncharacterized protein1.7e-1947.13Show/hide
Query:  DSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS-HDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSAV
        + Y+KI+     KS+S+D+SD +  P            N NS H S   +TN+      ++ + +E  EDE G   S     +SR+ SVSSS SGF SA+
Subjt:  DSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS-HDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSAV

Query:  KRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFG
        KRA S+RRSSSV+ERYCRIHDQ  TL SPIDDDE+ D  S   R    SVKK+K K      GKI++ACKRLFG
Subjt:  KRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFG

A0A5A7V402 Uncharacterized protein1.3e-4672.16Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEE-DEYGGEVSARAAALSRNNSVSSSVS
        MAD YSKIKAACKFKSRSIDYSDL+SLPHS  FN  AAVSNP SH SN ++TNR     H RLPEE+EE  ++E D   G     AA LSRN+SVSSSVS
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEE-DEYGGEVSARAAALSRNNSVSSSVS

Query:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACK
        GF SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDE+E GDSKE  K GGS    KKKKK N+AGKIVRA +
Subjt:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACK

A0A6J1C4C9 uncharacterized protein LOC1110083712.9e-5171.67Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+AGKIVRACKRLFG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

A0A6J1ERE9 uncharacterized protein LOC1114358632.9e-8399.43Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI
        VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSA KIVRACKRLFGI
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24275.1 Identified as a screen for stress-responsive genes.3.8e-1150Show/hide
Query:  LSRNNSVSSSVSGFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPI---DDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGK--IVRACKRLFGI
        LSRN SVS+S     S +K  +SMRRSSSV+ERYCRI+DQ +    P+   + DE ED D KE         K  KKKK N+  K   V+ACKR FGI
Subjt:  LSRNNSVSSSVSGFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPI---DDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGK--IVRACKRLFGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATAGCTACTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCACTTCGCTTCCTCACTCTCCTAGATTCAACGCTGCCGC
CGCCGTCTCCAATCCGAACTCTCACGATTCCAATAAGAACAAGACGAATCGGCAACACAGCCGTTTGCCGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGACGAATACG
GCGGAGAAGTCTCCGCCAGAGCCGCCGCGCTGAGTCGGAACAACTCTGTTTCTTCATCAGTCTCTGGATTCCATTCAGCGGTGAAGAGAGCTCTGTCGATGCGGAGATCT
TCGTCCGTAGCGGAACGGTACTGTAGAATTCACGATCAGTTCGCGACGCTTGCATCGCCGATCGATGATGATGAAATGGAAGATGGAGATTCGAAGGAGGAAAGAAAAAC
AGGAGGATCTGTGAAGAAGACGAAGAAGAAGAAGAAGAAGAACTCGGCAGGGAAGATCGTTAGAGCCTGTAAGCGACTTTTTGGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATAGCTACTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCACTTCGCTTCCTCACTCTCCTAGATTCAACGCTGCCGC
CGCCGTCTCCAATCCGAACTCTCACGATTCCAATAAGAACAAGACGAATCGGCAACACAGCCGTTTGCCGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGACGAATACG
GCGGAGAAGTCTCCGCCAGAGCCGCCGCGCTGAGTCGGAACAACTCTGTTTCTTCATCAGTCTCTGGATTCCATTCAGCGGTGAAGAGAGCTCTGTCGATGCGGAGATCT
TCGTCCGTAGCGGAACGGTACTGTAGAATTCACGATCAGTTCGCGACGCTTGCATCGCCGATCGATGATGATGAAATGGAAGATGGAGATTCGAAGGAGGAAAGAAAAAC
AGGAGGATCTGTGAAGAAGACGAAGAAGAAGAAGAAGAAGAACTCGGCAGGGAAGATCGTTAGAGCCTGTAAGCGACTTTTTGGAATCTAG
Protein sequenceShow/hide protein sequence
MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSAVKRALSMRRS
SSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLFGI