; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25436 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25436
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein Y14-like
Genome locationCarg_Chr11:4285017..4288764
RNA-Seq ExpressionCarg25436
SyntenyCarg25436
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588202.1 RNA-binding protein Y14, partial [Cucurbita argyrosperma subsp. sororia]8.4e-102100Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

XP_022931624.1 RNA-binding protein Y14-like [Cucurbita moschata]5.5e-10199.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

XP_022968337.1 RNA-binding protein Y14-like [Cucurbita maxima]3.3e-9896.95Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEADVSPRA FPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSAD PG+QRSIEGWIILVS
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFSRGPIRRKNTRP RE+RSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

XP_023529212.1 RNA-binding protein Y14-like [Cucurbita pepo subsp. pepo]3.2e-10199.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]2.4e-9694.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEAD SPRAPFPKLKSAITGGASS+LAGG KKTKGRGFR++SDRNTRLAGSDFDSL SADGPG QRSIEGWIILV+
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFS GPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein1.3e-9593.91Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEAD SPRAPFPKLKSAITGGASS+L+GG KKTKGRGFRE+SDRNTRLAGSDFDSL SADGPG QRSIEGWIILV+
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFS GPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B1.3e-9593.91Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEAD SPRAPFPKLKSAITGGASS+L+GG KKTKGRGFRE+SDRNTRLAGSDFDSL SADGPG QRSIEGWIILV+
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFS GPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

A0A6J1EUR9 RNA-binding protein Y14-like2.6e-10199.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like1.4e-9492.39Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEAD SPRAPFPKLKSAITGGASS+LAGG KKTKGRGFRE+SDRNTRL GSDFDSL SADGPG QRSIEGWIILV+
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAIS MDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

A0A6J1HTB7 RNA-binding protein Y14-like1.6e-9896.95Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS
        MASADVEAVDFEPEEDDLMDEDGAAEADVSPRA FPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSAD PG+QRSIEGWIILVS
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVS

Query:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIS MDGAELLTQIINVDWAFSRGPIRRKNTRP RE+RSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A3.2e-6466.83Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAG--GLKKTKGRGFRED-SDRNTRLAG----SDFDSLNSADGPGVQRSIE
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G  G +KTKGRGFR+D + R++RLAG    SDFDSL S  GPG  RSIE
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAG--GLKKTKGRGFRED-SDRNTRLAG----SDFDSLNSADGPGVQRSIE

Query:  GWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRS-
        GWI+LV+GVHEEAQEDDL N F DFG++KNLHLNLDRRTGFVKGYALIEYE+FEEA+ AI  +DG ELLTQII+VDWAFS GP++R+N R    RRSRS 
Subjt:  GWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRS-

Query:  PRRRY
        PRRRY
Subjt:  PRRRY

F4I9J7 RNA-binding protein Y141.7e-6568.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFRE--DSDRNTRLAGSDFDSLNSADGPGVQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   ADVSPRA  P+LKSAI G    +     KKTKGRGFRE  DSDR  RL+  DF+SL S   PG QRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFRE--DSDRNTRLAGSDFDSLNSADGPGVQRSIEGWI

Query:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGP-----IRRKNTRPARERRSR
        ILVSGVHEE QE+D+ NAFGDFGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AIS M+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

Q28BZ1 RNA-binding protein 8A7.5e-3756.64Show/hide
Query:  KKTKGRGFREDSDRNTRLAGSDFDSL-NSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  D     R+   D+DS+    D PG QRS+EGWI+ V+GVHEEA E+D+ + FG+FGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREDSDRNTRLAGSDFDSL-NSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  STMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRR
          ++G +L+ Q I+VDW F RGP   K  R +  RRSRSP RR
Subjt:  STMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRR

Q6ATR0 RNA-binding protein Y14B9.5e-4049.75Show/hide
Query:  ASADVEAVDF---EPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSD---FDSLNSADGP--GVQRSIE
        A+ DVE VD+   E EE+D MDED           P P + S            G+ +++GR       R+T +  S+   FDSL  A  P  G QRSIE
Subjt:  ASADVEAVDF---EPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSD---FDSLNSADGP--GVQRSIE

Query:  GWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSP
        GWI+LVSGV E+A+EDDL N F DFG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI  M+G +LLT+ + VDWAFSRGPI++  +     RRSR+P
Subjt:  GWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSP

Query:  RRR
         RR
Subjt:  RRR

Q6PH90 RNA-binding protein 8A-B2.6e-3756.64Show/hide
Query:  KKTKGRGFREDSDRNTRLAGSDFDSL-NSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  D    TR+   D+DS+    D PG QRS+EGWI+ V+GVHEEA E+D+ + FG+FGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREDSDRNTRLAGSDFDSL-NSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  STMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRR
          ++G +L+ Q ++VDW F RGP   K  R +  RRSRSP RR
Subjt:  STMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-6668.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFRE--DSDRNTRLAGSDFDSLNSADGPGVQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   ADVSPRA  P+LKSAI G    +     KKTKGRGFRE  DSDR  RL+  DF+SL S   PG QRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFRE--DSDRNTRLAGSDFDSLNSADGPGVQRSIEGWI

Query:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGP-----IRRKNTRPARERRSR
        ILVSGVHEE QE+D+ NAFGDFGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AIS M+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

AT3G11400.1 eukaryotic translation initiation factor 3G16.8e-0929.41Show/hide
Query:  AGSDFDSLNSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAF
        AG+D     SA G  ++R  +   + V+ + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      I+ V+WA 
Subjt:  AGSDFDSLNSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAF

Query:  SR
         R
Subjt:  SR

AT3G11400.2 eukaryotic translation initiation factor 3G16.8e-0929.41Show/hide
Query:  AGSDFDSLNSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAF
        AG+D     SA G  ++R  +   + V+ + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      I+ V+WA 
Subjt:  AGSDFDSLNSADGPGVQRSIEGWIILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAF

Query:  SR
         R
Subjt:  SR

AT5G61030.1 glycine-rich RNA-binding protein 32.6e-0832.05Show/hide
Query:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSR
        + + G+     ED L+ AF  +GE+ +  + LDR TG  +G+  + + S E A  AI  +DG +L  +++ V++A  R
Subjt:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSR

AT5G64200.1 ortholog of human splicing factor SC351.3e-0732.14Show/hide
Query:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWA--------FSRG-----PIRRKNTR
        +LV  +      DDL   F  +G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A         S+G     P + + +R
Subjt:  ILVSGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWA--------FSRG-----PIRRKNTR

Query:  PARERRSRSPRR
            RRSRSPRR
Subjt:  PARERRSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCGCTGATGTTGAGGCTGTCGACTTTGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGTCTCCCCACGAGCTCCTTTTCCTAA
GCTCAAATCCGCCATTACTGGTGGCGCATCTTCCACGTTGGCCGGTGGTTTGAAGAAAACCAAGGGTCGTGGATTTCGAGAAGATTCTGATCGTAACACCCGTCTTGCTG
GGTCGGATTTCGATTCCCTCAATTCTGCTGATGGCCCTGGCGTCCAACGATCTATTGAAGGATGGATCATTCTGGTATCTGGTGTACACGAAGAGGCACAGGAGGATGAT
CTACAAAATGCATTTGGTGACTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGCCGTACTGGGTTTGTCAAGGGGTATGCGTTGATCGAATACGAGAGCTTTGA
GGAAGCAGAGAAAGCAATATCTACCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCGTGGACCCATCAGAAGAAAGAACACAAGAC
CTGCACGAGAACGACGTTCGAGGAGCCCAAGGAGGAGATATTGA
mRNA sequenceShow/hide mRNA sequence
GAAATTGGGAAACCCTTGTTTGGATTCCCAAAACCCCTGCCATTCCCATCTTCTTCCCTCCCGTTTGCCCTTCAGCATTTGGCAGAACCGATTTGGAGCTCTGAGAGACC
TTTGGGTTAGCTATGGCCAGCGCTGATGTTGAGGCTGTCGACTTTGAGCCCGAGGAAGACGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGTCTCCCCACGAGC
TCCTTTTCCTAAGCTCAAATCCGCCATTACTGGTGGCGCATCTTCCACGTTGGCCGGTGGTTTGAAGAAAACCAAGGGTCGTGGATTTCGAGAAGATTCTGATCGTAACA
CCCGTCTTGCTGGGTCGGATTTCGATTCCCTCAATTCTGCTGATGGCCCTGGCGTCCAACGATCTATTGAAGGATGGATCATTCTGGTATCTGGTGTACACGAAGAGGCA
CAGGAGGATGATCTACAAAATGCATTTGGTGACTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGCCGTACTGGGTTTGTCAAGGGGTATGCGTTGATCGAATA
CGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCTACCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCGTGGACCCATCAGAAGAA
AGAACACAAGACCTGCACGAGAACGACGTTCGAGGAGCCCAAGGAGGAGATATTGATCTGGAGGTGTAGAACTCCAGGTGTGGTGTGGTGTTTATGATTTTAAATTGGAA
AGGTGTTGTGTTGTGGATTAGATATTAGGTGATGTTTCTACTGAGCTCTTACTCAACTGTCTCTCAAGATTCCCCTGGTTTCTTGGGGGATCTGAAGTTGATGATATTCC
CCCCTTTTTCCTTGGATTACTTGAGGTTCATGCTTTTTTGTGTTGAAACCTGCTATTTTGTATATTCTTTTGTTCCAAATTTGGTTCGGATCGAGGGTTTTGGATTTGAT
CGTTCTCCGAAAGCCCTCCTCCGTTGGAATCACATGTACTCTTTTCTTTGAGGTCAGAGGTTCAAATTCTCGTTATTTCATATGATTTTAGTATTAATATATTGATTTTA
TTTTT
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADVSPRAPFPKLKSAITGGASSTLAGGLKKTKGRGFREDSDRNTRLAGSDFDSLNSADGPGVQRSIEGWIILVSGVHEEAQEDD
LQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISTMDGAELLTQIINVDWAFSRGPIRRKNTRPARERRSRSPRRRY