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Carg25449 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25449
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationCarg_Chr13:6600670..6601171
RNA-Seq ExpressionCarg25449
SyntenyCarg25449
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]1.1e-2378.41Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWP
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L+SSSS KIDKFSVSS P     SP S A +AAV+SKYFL+Q   P
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWP

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6393.75Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWPSESAFRFCANRI
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAA         FQWPSESAFRFCANRI
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWPSESAFRFCANRI

Query:  GSIPAGYGVVDIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK
        GSIPAGYGVVDIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK
Subjt:  GSIPAGYGVVDIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-71100Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWPSESAFRFCANRI
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWPSESAFRFCANRI
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWPSESAFRFCANRI

Query:  GSIPAGYGVVDIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK
        GSIPAGYGVVDIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK
Subjt:  GSIPAGYGVVDIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]8.2e-2274.16Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQFQWP
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEED REAL SSSS KIDKFSV         SPPSP +++AA++SKYFL+Q   P
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQFQWP

XP_026390367.1 uncharacterized protein LOC113285835 [Papaver somniferum]2.1e-0953.93Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREA--------LSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLN
        ATSR+ RF+ E  PPQFVSVMRRR+PK+LDTI EEDHR+A        LSS SS K    S SS    MA    +  TS++ SS YF+N
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREA--------LSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLN

TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein4.0e-2274.16Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQFQWP
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEED REAL SSSS KIDKFSV         SPPSP +++AA++SKYFL+Q   P
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSP-ATSAAVSSKYFLNQFQWP

A0A314XQS6 Uncharacterized protein3.0e-0955.56Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+        ++L SSSS K    S SS PS   AS  S A +A   SKYFL +
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQ

A0A4Y7ID38 Uncharacterized protein3.0e-0950.56Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREA--------LSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLN
        ATSR+ RF+ E  PPQFVSVMRRR+PK+LDTI EEDHR+A        +SS SS K    S SS      A     ++S++ SS YF+N
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREA--------LSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLN

A0A4Y7K232 Uncharacterized protein1.0e-0953.93Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREA--------LSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLN
        ATSR+ RF+ E  PPQFVSVMRRR+PK+LDTI EEDHR+A        LSS SS K    S SS    MA    +  TS++ SS YF+N
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREA--------LSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLN

A0A5A7UJX7 Uncharacterized protein5.6e-2478.41Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWP
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L+SSSS KIDKFSVSS P     SP S A +AAV+SKYFL+Q   P
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)2.9e-0948.19Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQF
        ATSRLARFI+E  PPQFV+VMRRR+ KVLDTI EE+      S      +   +SS P T   S    + SA+ S    LN+F
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQF

AT4G21060.1 Galactosyltransferase family protein1.0e-0663.41Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDHRE
        ATSRLARF+SE  PPQFV+VMRR   + + LDTI EE+++E
Subjt:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDHRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACATCTCGATTGGCTAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAACGAAGA
AGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCTACCATGGCTGCTTCGCCGCCGTCTCCTGCAACTTCCG
CCGCCGTTAGTTCCAAATACTTTCTCAATCAGTTTCAATGGCCTTCGGAATCTGCTTTTCGTTTTTGCGCCAATCGGATCGGGTCCATTCCGGCCGGTTATGGTGTTGTA
GATATCGAATCGACGGCGGATTCGGCTGCCGCCGGTGATGGTGGTCGTCCTGTATTGTGTACTCCATTGTCTTATGCGATGAAACTCTTAGAAAATATAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACATCTCGATTGGCTAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAACGAAGA
AGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCTACCATGGCTGCTTCGCCGCCGTCTCCTGCAACTTCCG
CCGCCGTTAGTTCCAAATACTTTCTCAATCAGTTTCAATGGCCTTCGGAATCTGCTTTTCGTTTTTGCGCCAATCGGATCGGGTCCATTCCGGCCGGTTATGGTGTTGTA
GATATCGAATCGACGGCGGATTCGGCTGCCGCCGGTGATGGTGGTCGTCCTGTATTGTGTACTCCATTGTCTTATGCGATGAAACTCTTAGAAAATATAAAATAA
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVSSKYFLNQFQWPSESAFRFCANRIGSIPAGYGVV
DIESTADSAAAGDGGRPVLCTPLSYAMKLLENIK