; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25455 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25455
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRemorin_C domain-containing protein
Genome locationCarg_Chr13:6554841..6556317
RNA-Seq ExpressionCarg25455
SyntenyCarg25455
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583874.1 hypothetical protein SDJN03_19806, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8898.82Show/hide
Query:  LLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMS
        LLIS+HVLQLKNLTKVSDMA IIDISFFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMS
Subjt:  LLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMS

Query:  LYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  LYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

KAG7019494.1 hypothetical protein SDJN02_18455, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-125100Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV

Query:  AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV
        AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV
Subjt:  AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV

Query:  VNVMDANVADFLDLGHHEEGKRANVAVQ
        VNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  VNVMDANVADFLDLGHHEEGKRANVAVQ

XP_022927197.1 uncharacterized protein LOC111434118 isoform X1 [Cucurbita moschata]6.3e-11790.53Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM+               L+S  +  LKNLTKVSDMA IIDIS
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS

Query:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
        FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
Subjt:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY

Query:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

XP_023001460.1 uncharacterized protein LOC111495588 isoform X1 [Cucurbita maxima]5.0e-11488.07Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM+               L+S  +  LKNLTKVS MA IIDIS
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS

Query:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
        FFEAYGGDSMDGSCVA+FS+NRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
Subjt:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY

Query:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LDRFSLCIKYDVFQVVNVMDANVADFLDL HHEEGKRANVAV+
Subjt:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

XP_023520199.1 uncharacterized protein LOC111783503 isoform X1 [Cucurbita pepo subsp. pepo]4.5e-11589.3Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS
        MEEWCVGFNDREVSICFVVFKPLVFV+DHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM+               L+S  V  LKNLTKVSDMA IIDIS
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS

Query:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
        FFEAYGGDSMDGSCVAK SRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
Subjt:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY

Query:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LDRFSLCIKYDVFQVVNVMDANVADFLDL HHEEGKRANVAVQ
Subjt:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

TrEMBL top hitse value%identityAlignment
A0A1S3BAH1 uncharacterized protein LOC1034879591.6e-8670.69Show/hide
Query:  EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDISFF
        EWCVGFND+E+ + FVVFKP+V VVD FVEALKQFSFST NLGCIQ+ VLKSIHGNM+               L+S  +LQ   ++K S+MA ++D+SFF
Subjt:  EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDISFF

Query:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD
        EAYGG+SMDGSCVAKF+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SG+CLKSQNR TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLD
Subjt:  EAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLD

Query:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEE
        RFSLCIKYD++QVVNV DANV+ F DL + EE
Subjt:  RFSLCIKYDVFQVVNVMDANVADFLDLGHHEE

A0A6J1EGH4 uncharacterized protein LOC111434118 isoform X13.0e-11790.53Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM+               L+S  +  LKNLTKVSDMA IIDIS
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS

Query:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
        FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
Subjt:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY

Query:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

A0A6J1EKC5 uncharacterized protein LOC111434118 isoform X27.8e-8976.75Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV
        MEEWCVGFNDRE+  C +  K  +   +   EA+                                  LKNLTKVSDMA IIDISFFEAYGGDSMDGSCV
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV

Query:  AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV
        AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV
Subjt:  AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV

Query:  VNVMDANVADFLDLGHHEEGKRANVAVQ
        VNVMDANVADFLDLGHHEEGKRANVAVQ
Subjt:  VNVMDANVADFLDLGHHEEGKRANVAVQ

A0A6J1KIN9 uncharacterized protein LOC111495588 isoform X26.2e-8674.12Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV
        MEEWCVGFNDRE+  C +  K  +   +   EA+                                  LKNLTKVS MA IIDISFFEAYGGDSMDGSCV
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCV

Query:  AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV
        A+FS+NRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV
Subjt:  AKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQV

Query:  VNVMDANVADFLDLGHHEEGKRANVAVQ
        VNVMDANVADFLDL HHEEGKRANVAV+
Subjt:  VNVMDANVADFLDLGHHEEGKRANVAVQ

A0A6J1KL93 uncharacterized protein LOC111495588 isoform X12.4e-11488.07Show/hide
Query:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS
        MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM+               L+S  +  LKNLTKVS MA IIDIS
Subjt:  MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNML---------------LISVHVLQLKNLTKVSDMAAIIDIS

Query:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
        FFEAYGGDSMDGSCVA+FS+NRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISG+CLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY
Subjt:  FFEAYGGDSMDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPY

Query:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ
        LDRFSLCIKYDVFQVVNVMDANVADFLDL HHEEGKRANVAV+
Subjt:  LDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEGKRANVAVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTGGTGTGTGGGTTTTAATGACAGAGAAGTGAGTATTTGCTTCGTTGTATTCAAGCCATTGGTATTTGTTGTTGATCATTTCGTTGAAGCTCTCAAACAATT
CTCTTTCTCCACCACAAATCTTGGTTGCATTCAGAGTTCTGTCCTCAAGAGCATCCATGGAAACATGCTATTAATCAGTGTTCATGTTCTTCAGCTCAAGAACTTGACAA
AAGTATCAGACATGGCAGCCATAATTGATATCAGCTTCTTCGAAGCCTATGGGGGAGACTCCATGGATGGGTCCTGCGTTGCAAAGTTCTCAAGAAACAGAGTAATATCA
ATGATTTCAGTGGCTGCAAAGTCCGGCGGCGACATGAACGATCTGTCCTACGCTTGCTTGGCGATATTCAAGTCCAGATTTCAGAAGATTGAAGGAGTGATATCTGGGGT
TTGCTTGAAATCACAGAATAGGTCCACTGTTATGTCACTTTATGTCTGGAATTCGCCCTTTTATTGTTACTCATGGATCTTGAACTCCGATCATTTGAACTCCATGATGC
CTTATCTCGATCGTTTTTCTCTTTGTATTAAATATGATGTGTTTCAAGTGGTGAATGTAATGGATGCAAATGTGGCTGATTTTCTTGATTTGGGTCATCATGAAGAGGGG
AAAAGAGCAAACGTTGCGGTGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTGGTGTGTGGGTTTTAATGACAGAGAAGTGAGTATTTGCTTCGTTGTATTCAAGCCATTGGTATTTGTTGTTGATCATTTCGTTGAAGCTCTCAAACAATT
CTCTTTCTCCACCACAAATCTTGGTTGCATTCAGAGTTCTGTCCTCAAGAGCATCCATGGAAACATGCTATTAATCAGTGTTCATGTTCTTCAGCTCAAGAACTTGACAA
AAGTATCAGACATGGCAGCCATAATTGATATCAGCTTCTTCGAAGCCTATGGGGGAGACTCCATGGATGGGTCCTGCGTTGCAAAGTTCTCAAGAAACAGAGTAATATCA
ATGATTTCAGTGGCTGCAAAGTCCGGCGGCGACATGAACGATCTGTCCTACGCTTGCTTGGCGATATTCAAGTCCAGATTTCAGAAGATTGAAGGAGTGATATCTGGGGT
TTGCTTGAAATCACAGAATAGGTCCACTGTTATGTCACTTTATGTCTGGAATTCGCCCTTTTATTGTTACTCATGGATCTTGAACTCCGATCATTTGAACTCCATGATGC
CTTATCTCGATCGTTTTTCTCTTTGTATTAAATATGATGTGTTTCAAGTGGTGAATGTAATGGATGCAAATGTGGCTGATTTTCTTGATTTGGGTCATCATGAAGAGGGG
AAAAGAGCAAACGTTGCGGTGCAATAG
Protein sequenceShow/hide protein sequence
MEEWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNMLLISVHVLQLKNLTKVSDMAAIIDISFFEAYGGDSMDGSCVAKFSRNRVIS
MISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNRSTVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDLGHHEEG
KRANVAVQ