; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25463 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25463
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglucan endo-1,3-beta-glucosidase 13
Genome locationCarg_Chr13:6497585..6498692
RNA-Seq ExpressionCarg25463
SyntenyCarg25463
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583863.1 Glucan endo-1,3-beta-glucosidase 13, partial [Cucurbita argyrosperma subsp. sororia]6.5e-6198.32Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        MGTKIWVLEILLLLQHF LGEVTAAAAAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQNGNSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

KAG7019486.1 Glucan endo-1,3-beta-glucosidase 13, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-71100Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNFAQHLQKARRTVQGMAA
        YAFNRFYKQNGNSDMACNFAQHLQKARRTVQGMAA
Subjt:  YAFNRFYKQNGNSDMACNFAQHLQKARRTVQGMAA

XP_022927428.1 glucan endo-1,3-beta-glucosidase 13-like isoform X3 [Cucurbita moschata]6.7e-5894.96Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        MGTKIWVLEILLLLQHFF+GEVT   AAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

XP_023520067.1 glucan endo-1,3-beta-glucosidase 13-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-5896.64Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        M TKIWVLEILLLLQHFFLGEVT AAAAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

XP_023520068.1 glucan endo-1,3-beta-glucosidase 13-like isoform X2 [Cucurbita pepo subsp. pepo]2.3e-5896.64Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        M TKIWVLEILLLLQHFFLGEVT AAAAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

TrEMBL top hitse value%identityAlignment
A0A6J1EH52 glucan endo-1,3-beta-glucosidase 13-like isoform X23.2e-5894.96Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        MGTKIWVLEILLLLQHFF+GEVT   AAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

A0A6J1EHM6 glucan endo-1,3-beta-glucosidase 13-like isoform X13.2e-5894.96Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        MGTKIWVLEILLLLQHFF+GEVT   AAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

A0A6J1EKZ5 glucan endo-1,3-beta-glucosidase 13-like isoform X33.2e-5894.96Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        MGTKIWVLEILLLLQHFF+GEVT   AAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

A0A6J1KLB1 glucan endo-1,3-beta-glucosidase 13 isoform X33.6e-5794.12Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        M T+IWVLEILLLLQHFFLGEVT   AAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

A0A6J1KMU9 glucan endo-1,3-beta-glucosidase 13 isoform X23.6e-5794.12Show/hide
Query:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
        M T+IWVLEILLLLQHFFLGEVT   AAAAGVPVTRTWTPSE NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS
Subjt:  MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHAS

Query:  YAFNRFYKQNGNSDMACNF
        YAFNRFYKQN NSDMACNF
Subjt:  YAFNRFYKQNGNSDMACNF

SwissProt top hitse value%identityAlignment
P52409 Glucan endo-1,3-beta-glucosidase4.5e-1751.43Show/hide
Query:  GGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        GG WCVAK G +  DLQN +++ACG    DC+ IQ GG C+ P++L +HASY  N +Y+ NG++D+AC+F
Subjt:  GGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

Q8VYE5 Glucan endo-1,3-beta-glucosidase 123.7e-1952.44Show/hide
Query:  SEVNATGAEGG---SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        S V   G  GG    WC+A    S  +LQ ALDWACG G  DC A+Q   PC++PDT+LSHASYAFN +Y+Q+G S + C+F
Subjt:  SEVNATGAEGG---SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

Q9C7U5 Glucan endo-1,3-beta-glucosidase 21.7e-1645.45Show/hide
Query:  VPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        V V R      V A      ++C A+ G     LQ ALDWACG GK DC  I++G  CY+PD +++HA+YAF+ +Y Q GN+  ACNF
Subjt:  VPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

Q9FJU9 Glucan endo-1,3-beta-glucosidase 131.3e-1953.16Show/hide
Query:  SEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        S  N++G+   SWC+A    S+ DL+ ALDWACG G  DC AIQ   PC+QPDTL+SHAS+ FN +++QN  +D+AC+F
Subjt:  SEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 52.5e-1541.76Show/hide
Query:  AAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        AA   +    T +++     +   WCVAK       LQ A++WACG G ADC  IQ+GGPC  P  +   AS+ FN +Y +NG  D ACNF
Subjt:  AAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

Arabidopsis top hitse value%identityAlignment
AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein7.7e-2052.27Show/hide
Query:  VPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        VPV     P   N+    G SWCVAKPG SQ+ LQ ALD+ACG+  ADC  +Q+GG CY P +L SHAS+AFN +Y++N  S  +C+F
Subjt:  VPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

AT4G05430.1 Carbohydrate-binding X8 domain superfamily protein6.1e-2557.89Show/hide
Query:  NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        N T  EG +WCVA+PG +Q +LQ ALDWACG+G+ DC  I++ G CY+PDT++SHAS+AFN +Y+ NGN+ +AC F
Subjt:  NATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

AT4G29360.1 O-Glycosyl hydrolases family 17 protein2.6e-2052.44Show/hide
Query:  SEVNATGAEGG---SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        S V   G  GG    WC+A    S  +LQ ALDWACG G  DC A+Q   PC++PDT+LSHASYAFN +Y+Q+G S + C+F
Subjt:  SEVNATGAEGG---SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

AT4G29360.2 O-Glycosyl hydrolases family 17 protein2.6e-2052.44Show/hide
Query:  SEVNATGAEGG---SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        S V   G  GG    WC+A    S  +LQ ALDWACG G  DC A+Q   PC++PDT+LSHASYAFN +Y+Q+G S + C+F
Subjt:  SEVNATGAEGG---SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF

AT5G56590.1 O-Glycosyl hydrolases family 17 protein9.1e-2153.16Show/hide
Query:  SEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF
        S  N++G+   SWC+A    S+ DL+ ALDWACG G  DC AIQ   PC+QPDTL+SHAS+ FN +++QN  +D+AC+F
Subjt:  SEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQNGNSDMACNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAAAAATCTGGGTTTTGGAGATCCTCCTTCTACTCCAACATTTCTTTCTGGGGGAGGTGACAGCGGCGGCGGCGGCGGCGGCGGGTGTGCCAGTGACGAGGAC
GTGGACGCCGTCGGAAGTGAACGCGACGGGTGCAGAGGGGGGTTCGTGGTGCGTGGCGAAGCCTGGAGTTTCGCAGATCGACCTGCAGAATGCGCTGGACTGGGCGTGTG
GATTGGGGAAAGCGGATTGCAGAGCCATTCAAAAGGGGGGCCCTTGCTATCAACCCGACACGCTCTTGTCTCATGCTTCTTATGCATTCAATCGCTTCTATAAGCAGAAT
GGCAACTCCGATATGGCTTGCAATTTCGCTCAGCATCTGCAGAAGGCAAGAAGAACAGTCCAAGGCATGGCTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACAAAAATCTGGGTTTTGGAGATCCTCCTTCTACTCCAACATTTCTTTCTGGGGGAGGTGACAGCGGCGGCGGCGGCGGCGGCGGGTGTGCCAGTGACGAGGAC
GTGGACGCCGTCGGAAGTGAACGCGACGGGTGCAGAGGGGGGTTCGTGGTGCGTGGCGAAGCCTGGAGTTTCGCAGATCGACCTGCAGAATGCGCTGGACTGGGCGTGTG
GATTGGGGAAAGCGGATTGCAGAGCCATTCAAAAGGGGGGCCCTTGCTATCAACCCGACACGCTCTTGTCTCATGCTTCTTATGCATTCAATCGCTTCTATAAGCAGAAT
GGCAACTCCGATATGGCTTGCAATTTCGCTCAGCATCTGCAGAAGGCAAGAAGAACAGTCCAAGGCATGGCTGCCTGAAGTTGGGTATGCTTTGTGGGATTTTGGTGGTT
ATTCTTAATTTGTACTTAGGGAGCTGATAATAAAGGTAATTAGGGGTTAAGCATGATTAAGTAAGTTAATTAAGGGAGGACAGGTGGTGAAAGCAGACAACATTAGTTAA
TTGTAAATTTTCTT
Protein sequenceShow/hide protein sequence
MGTKIWVLEILLLLQHFFLGEVTAAAAAAAGVPVTRTWTPSEVNATGAEGGSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGPCYQPDTLLSHASYAFNRFYKQN
GNSDMACNFAQHLQKARRTVQGMAA