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Carg25473 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25473
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationCarg_Chr20:5208388..5213139
RNA-Seq ExpressionCarg25473
SyntenyCarg25473
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148513.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia]3.3e-4993.2Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]7.9e-5199.03Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022986645.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]1.0e-5099.03Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSK PSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]2.7e-51100Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]3.0e-5097.09Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSAR+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein1.5e-4792.23Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial6.1e-4994.17Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.6e-4993.2Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial3.8e-5199.03Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.0e-5199.03Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSK PSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
SwissProt top hitse value%identityAlignment
Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial7.2e-3970.27Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KAL+ S   +PSS R+ S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH
Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related5.1e-4070.27Show/hide
Query:  MASSLFKALVESSSKIPSSARSLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KAL+ S   +PSS R+ S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKALVESSSKIPSSARSLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGTCTTTTCAAAGCACTTGTTGAATCTTCCTCCAAAATTCCTTCTTCGGCTAGAAGTCTGAGCCTTGTTAGCAACCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAACGAGGTTCCACCGATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GTCATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTACACTCAGGACCATCATCACTAG
mRNA sequenceShow/hide mRNA sequence
ATTATTACTATTTATTTTGGGGGCAAAACTTCCGTCTAGCGTTTATACTTGGAGCTCTCTCTGGCCGTAGCTCTCCTTCGCGCTCTCTTTCTCCATCTCAGGTTGTGTGT
TTGATCGGTGGATCAATGGCGTCGAGTCTTTTCAAAGCACTTGTTGAATCTTCCTCCAAAATTCCTTCTTCGGCTAGAAGTCTGAGCCTTGTTAGCAACCAAATCGGCCA
GCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAACGAGGTTCCACCGATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGACA
GCAATCCTGCCCTTGGTCATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTACACTCAGGACCATCATCACTAGAAG
ATCTGCAAGTGATCATTCCAGACAGCAACCCTGAACATGGAAAGACAATACCCTACCTTTTCCAAACTTGAATTCTGTAACGAAATGACTGTCACGGTTGTACTCTGCCT
GCATAAATAGGGATTTGGGAATTCCATTCACTCACACTTGGCTGGTTCCTTTGTCTTTGCCAAATTTGTTTCATTGCCGTGTCTAATGACTTTATCTTGTTGACTCGAAT
TCCAATAAAAGGTTTTTGATGTCTTGGAGTTGCAAGCTTGAAATGACCCACTTTTTCATTTCTAGCCTCGATCTTATGTGCCTAGCATAGTATCACCGAGTACTAATACT
TTATTTCTAAAATGTGCTTGACTTTGACAATAGGGGTATGATCCAT
Protein sequenceShow/hide protein sequence
MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH