| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6571215.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 5.1e-284 | 100 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
QMEAMLLKH
Subjt: QMEAMLLKH
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| KAG7011018.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. argyrosperma] | 5.1e-284 | 100 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
QMEAMLLKH
Subjt: QMEAMLLKH
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| XP_022943800.1 RNA polymerase sigma factor sigA-like [Cucurbita moschata] | 3.8e-279 | 98.62 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVEALLLLQKSMLEKQWNLSFDQT+LAD RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
+MEAMLLKH
Subjt: QMEAMLLKH
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| XP_022986506.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 6.0e-269 | 96.07 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRL NSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSS NFSPRNQSSNRH HCIKA PSSPTAEP LHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVE LLLLQKSMLEKQWNLSFDQT+LAD PRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTIN ELLQNRLKGYV+G
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLG+REREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
+MEAMLLKH
Subjt: QMEAMLLKH
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| XP_023513025.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 5.1e-276 | 97.65 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSN-RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
MATTTAITGLGAAKRLFNSSSYYSDFTEK+LY NDHRIGQTQVSPTKSVVITARSS NFSPRNQSS+ RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSN-RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSFDQT+LAD PRGKTQKKVPVTCSGVSARQRRMSS+RKIQSKHVLMAQPRISKQLRPTIN ELLQNRLKGYVR
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKT
Query: RQMEAMLLKH
R+MEAMLLKH
Subjt: RQMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 1.0e-253 | 90.39 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
M TTAI GLGAAKRL NSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SSANFSP SNRH CIKAVKEHV+TPSSPTAEP L N+TIWE
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSF+QT+ D PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISKQLRPTI+PELLQNRLKGYV+
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTD WILKAEVNKLI TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ+GLVA EKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKT
Query: RQMEAMLLKH
R+MEAML+KH
Subjt: RQMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 1.0e-253 | 90.39 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
M TTAI GLGAAKRL NSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SSANFSP SNRH CIKAVKEHV+TPSSPTAEP L N+TIWE
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHG-HCIKAVKEHVDTPSSPTAEPRLHNSTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
DEETDLKCTVEALLLLQKSMLEKQWNLSF+QT+ D PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISKQLRPTI+PELLQNRLKGYV+
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTD WILKAEVNKLI TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ+GLVA EKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKT
Query: RQMEAMLLKH
R+MEAML+KH
Subjt: RQMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 4.8e-248 | 88.61 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
M T AI GLGAAKRL NSSSYYSDF EK+LYANDHR+GQ+QVSPTKSVVI A+SSANFSP SSNRH CIKAVKEHVDTPSSPT EP L NST WED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EE DLKCTVEALLLLQKSMLEKQWNLSF+QT+ D RG+TQKKVPVTCSGVSARQRRMSSKRKIQSK+ M QP+ISKQLR TI+PELLQ RLKGYV+G
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR +LRS V+ECSLA+EKLAMSNVRLVMSIAQRYD MGAEM DLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKVRLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTD WILKAEVNKLI TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ+GLVA EKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
+MEAMLLKH
Subjt: QMEAMLLKH
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| A0A6J1FYA0 RNA polymerase sigma factor sigA-like | 1.8e-279 | 98.62 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVEALLLLQKSMLEKQWNLSFDQT+LAD RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
+MEAMLLKH
Subjt: QMEAMLLKH
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| A0A6J1J7Q5 RNA polymerase sigma factor sigA-like | 2.9e-269 | 96.07 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
MATTTAITGLGAAKRL NSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSS NFSPRNQSSNRH HCIKA PSSPTAEP LHNSTIWED
Subjt: MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
EETDLKCTVE LLLLQKSMLEKQWNLSFDQT+LAD PRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTIN ELLQNRLKGYV+G
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLG+REREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVA EKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTR
Query: QMEAMLLKH
+MEAMLLKH
Subjt: QMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 6.5e-40 | 34.34 | Show/hide |
Query: MLEKQWNLSFDQTMLADTPR-GKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR-GLLSEELLSHAEVVRLS
+LE+Q ++S T R + K + T SG+ + + S K+K L+AQ E+ N Y+R S +LL+ E LS
Subjt: MLEKQWNLSFDQTMLADTPR-GKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR-GLLSEELLSHAEVVRLS
Query: KKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGF
I+ L LE +T L ER G +P+ Q A + + + LR + +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGF
Subjt: KKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGF
Query: KISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS
K STY +WWI+Q V K+L + SRM+RLP HM E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E
Subjt: KISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS
Query: YIADNCLENNPWHGTDIWI---LKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLL
IAD DI I ++ +++K++ +LG RE+++IR G+ D T +EI + +G+SRERVRQI A+ KLK + ++ L+
Subjt: YIADNCLENNPWHGTDIWI---LKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 5.4e-180 | 66.86 | Show/hide |
Query: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
T A+ GL KRL +SS Y+SD TEK L NDH Q ++ TKS ITA+ ++N+SP SSNRH KA+KE VD S T +P L N T E
Subjt: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
Query: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSF++ + ++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++ KQ+R
Subjt: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQNR
Query: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM
Subjt: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGLIRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKL
VFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQ+GLVA EKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKL
Query: KKAAKTRQMEAMLLKH
K AA+ R+MEAM+LK+
Subjt: KKAAKTRQMEAMLLKH
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| P18182 RNA polymerase principal sigma factor HrdA | 3.9e-37 | 34.81 | Show/hide |
Query: YVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPS-EDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDL
Y+R + LLS AE V L+++++ GL E E+L C P +D+LA+ L V+ LA+ +L +N+RLV+S+A+RY G M DL
Subjt: YVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPS-EDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDL
Query: VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLG-LIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKV
VQ G +GL+R +EKFD ++G+K STY WWIRQ +S+AL + +R +R+P H+ E + ++R + LQE+G P+ +A L++ A E + +V
Subjt: VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLG-LIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKV
Query: FSLDREAFPSLNGLPGETHHSYIADNCLEN---NPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAW
L +E SL+ GE + D + +P +L+ + + + +TLG+RER++++L +GL D T EEI + G++RER+RQI
Subjt: FSLDREAFPSLNGLPGETHHSYIADNCLEN---NPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAW
Query: EKLKKAAKTRQMEAML
KL+ A Q+ L
Subjt: EKLKKAAKTRQMEAML
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| Q03065 RNA polymerase sigma-B factor | 1.0e-37 | 32.42 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLR
LLSH + + +++++ + + K L E+L EP+ + A +++ L + + +A++K+ +N+RLV+SIA++Y K E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG+++A+ + SR +RLP HM ++L I+ + L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVAWEKLKK
G +T + D+ + +P + +L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQ+ A L++
Subjt: LNGLPGETH-HSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVAWEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 4.5e-126 | 49.15 | Show/hide |
Query: MATTTAITGLGAAKRLFNSSSYYSD-FTEKVLY-------------ANDHRIGQTQVSPTKSVVITARSSANFSPRNQSS-----NRHGHCIKAVKEHVD
M T A+ GL A RL ++S +D +KV D T + A SP ++ H A+
Subjt: MATTTAITGLGAAKRLFNSSSYYSD-FTEKVLY-------------ANDHRIGQTQVSPTKSVVITARSSANFSPRNQSS-----NRHGHCIKAVKEHVD
Query: TPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFDQTM------LADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQP
P PT P + DL+ ++EA++LLQ+SMLEKQW L FD LA+ ++ V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFDQTM------LADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQP
Query: RISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNV
+ ++PEL+Q+R + Y+RG +S+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS +LRS + E LARE L MSN+
Subjt: RISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNV
Query: RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAE
RLV+SIAQ+YD +G E+ DL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVS+AL ENS+ RLPT++HERL IR AK L+++GI P+I+ IA
Subjt: RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+ +TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQIGLVAWEKLKKAAKTRQMEAML
GLSRERVRQ+GL+A EKLK AA+ + +EA+L
Subjt: GLSRERVRQIGLVAWEKLKKAAKTRQMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 4.6e-41 | 34.34 | Show/hide |
Query: MLEKQWNLSFDQTMLADTPR-GKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR-GLLSEELLSHAEVVRLS
+LE+Q ++S T R + K + T SG+ + + S K+K L+AQ E+ N Y+R S +LL+ E LS
Subjt: MLEKQWNLSFDQTMLADTPR-GKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVR-GLLSEELLSHAEVVRLS
Query: KKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGF
I+ L LE +T L ER G +P+ Q A + + + LR + +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGF
Subjt: KKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGF
Query: KISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS
K STY +WWI+Q V K+L + SRM+RLP HM E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E
Subjt: KISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS
Query: YIADNCLENNPWHGTDIWI---LKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLL
IAD DI I ++ +++K++ +LG RE+++IR G+ D T +EI + +G+SRERVRQI A+ KLK + ++ L+
Subjt: YIADNCLENNPWHGTDIWI---LKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLL
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| AT1G64860.1 sigma factor A | 3.9e-181 | 66.86 | Show/hide |
Query: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
T A+ GL KRL +SS Y+SD TEK L NDH Q ++ TKS ITA+ ++N+SP SSNRH KA+KE VD S T +P L N T E
Subjt: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
Query: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSF++ + ++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++ KQ+R
Subjt: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQNR
Query: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM
Subjt: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGLIRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKL
VFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQ+GLVA EKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKL
Query: KKAAKTRQMEAMLLKH
K AA+ R+MEAM+LK+
Subjt: KKAAKTRQMEAMLLKH
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| AT1G64860.2 sigma factor A | 2.4e-167 | 66.18 | Show/hide |
Query: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
T A+ GL KRL +SS Y+SD TEK L NDH Q ++ TKS ITA+ ++N+SP SSNRH KA+KE VD S T +P L N T E
Subjt: TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE----
Query: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSF++ + ++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++ KQ+R
Subjt: --DEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMAQPRISKQLRPTINPELLQNR
Query: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM
Subjt: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGLIRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.1e-34 | 31.63 | Show/hide |
Query: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y G
Subjt: LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNA-KVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + K++ +NSR +RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNA-KVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQIGLVAWE
S+ + + + T D+ +E P +++ V L+ L +ER II+L G+D + + EI + GLS+ERVRQ+ A
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQIGLVAWE
Query: KLKKAAKTRQMEA
+LK+ + + A
Subjt: KLKKAAKTRQMEA
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| AT5G13730.1 sigma factor 4 | 8.4e-35 | 32.86 | Show/hide |
Query: SSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSS
S KR+ + + + R+ + E + V G LS E V+L +K G LE T ++E + +++ L R K + S
Subjt: SSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSS
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + +A+ SR+++LP M E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIR
Query: NAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQME
+ LY GL+ E +++EEI K + LSRERVRQI +A +KL+ ++
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQME
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