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Carg25512 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25512
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein PIR
Genome locationCarg_Chr10:5715529..5716229
RNA-Seq ExpressionCarg25512
SyntenyCarg25512
Gene Ontology termsGO:0000902 - cell morphogenesis (biological process)
GO:0006417 - regulation of translation (biological process)
GO:0030833 - regulation of actin filament polymerization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031209 - SCAR complex (cellular component)
GO:0000340 - RNA 7-methylguanosine cap binding (molecular function)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023907.1 Protein PIR [Cucurbita argyrosperma subsp. argyrosperma]5.1e-33100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIGMHFLELCMDIEHLDLVRYDFGVEKNACY
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIGMHFLELCMDIEHLDLVRYDFGVEKNACY
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIGMHFLELCMDIEHLDLVRYDFGVEKNACY
XP_011659977.2 protein PIR [Cucumis sativus]1.2e-13100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
XP_022961250.1 protein PIR isoform X1 [Cucurbita moschata]1.2e-13100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
XP_022988006.1 protein PIR isoform X1 [Cucurbita maxima]1.2e-13100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
XP_038878720.1 protein PIR [Benincasa hispida]1.2e-13100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
TrEMBL top hitse value%identityAlignment
A0A0A0LWG4 DUF1394 domain-containing protein5.7e-14100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
A0A5D3CDP3 Protein PIR5.7e-14100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
A0A6J1H9U6 protein PIR isoform X15.7e-14100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
A0A6J1JL09 protein PIR isoform X15.7e-14100Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
A0A7N2M0E8 Uncharacterized protein4.0e-1589.58Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIGMHFLE
        MAVPVEEAIAALSTFSLED+QPE+QGPG+WVSTERGATESPIGM+ LE
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIGMHFLE
SwissProt top hitse value%identityAlignment
Q5S2C3 Protein PIR5.2e-1283.33Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
Arabidopsis top hitse value%identityAlignment
AT5G18410.1 transcription activators3.7e-1383.33Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
AT5G18410.2 transcription activators3.7e-1383.33Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
AT5G18410.3 transcription activators3.7e-1383.33Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPI
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCCCCGTCGAAGAAGCCATTGCTGCGTTGTCCACATTCTCCCTTGAGGATGACCAGCCAGAGTTGCAAGGACCTGGCGTTTGGGTGTCAACTGAGAGAGGCGC
AACCGAGAGTCCAATAGGTATGCATTTTTTGGAGTTGTGTATGGATATCGAGCATCTAGATTTAGTACGCTATGATTTTGGAGTTGAAAAGAATGCCTGCTATTGA
mRNA sequenceShow/hide mRNA sequence
TAATTTCTTGAAGCACACTTCCTCAACTGAAATTCGGAGTAAAAACAAAGAAATCAACACGAAAGAAGAAAGCGAGTTTACCGAATCAGAACGATTTCAACTCAGATTCT
TAGCTACTTATGATCTTAAACCAGACTGCTTCCTAGATCTCTCTTTGTTTGAGTCCTCCATGGCTGTCCCCGTCGAAGAAGCCATTGCTGCGTTGTCCACATTCTCCCTT
GAGGATGACCAGCCAGAGTTGCAAGGACCTGGCGTTTGGGTGTCAACTGAGAGAGGCGCAACCGAGAGTCCAATAGGTATGCATTTTTTGGAGTTGTGTATGGATATCGA
GCATCTAGATTTAGTACGCTATGATTTTGGAGTTGAAAAGAATGCCTGCTATTGAATGATACCTTTTCTATTCTTCAAATGTGGGTGATCGTAATAGGAACTTTTTACTG
GAACGGAACAGAGGATTTGTGGTCATTGTATTTTCATTGACAATTGC
Protein sequenceShow/hide protein sequence
MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIGMHFLELCMDIEHLDLVRYDFGVEKNACY