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Carg25556 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25556
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThioredoxin
Genome locationCarg_Chr07:4751666..4753285
RNA-Seq ExpressionCarg25556
SyntenyCarg25556
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044193 - Thioredoxin-like 3-3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595224.1 Thioredoxin-like 3-3, partial [Cucurbita argyrosperma subsp. sororia]7.9e-69100Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFGTGEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

XP_008462474.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo]2.1e-6192.13Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEG G    VN HGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

XP_022143884.1 thioredoxin-like 3-3 [Momordica charantia]5.5e-6292.13Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M D  KKGLEG GLD  VNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPK+ FIYADIDECPETT+HIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

XP_022963258.1 thioredoxin-like 3-3 [Cucurbita moschata]5.7e-6798.43Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFGTGEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

XP_022972722.1 thioredoxin-like 3-3 [Cucurbita maxima]2.2e-6697.64Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEGAGLDPTV+RHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFGTGEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

TrEMBL top hitse value%identityAlignment
A0A1S3CH29 thioredoxin-like 3-31.0e-6192.13Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEG G    VN HGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

A0A5D3C5X7 Thioredoxin-like 3-31.0e-6192.13Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEG G    VN HGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

A0A6J1CQN4 thioredoxin-like 3-32.7e-6292.13Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M D  KKGLEG GLD  VNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPK+ FIYADIDECPETT+HIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

A0A6J1HH85 thioredoxin-like 3-32.7e-6798.43Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFGTGEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

A0A6J1I9G9 thioredoxin-like 3-31.0e-6697.64Show/hide
Query:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
        M DK KKGLEGAGLDPTV+RHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH
Subjt:  MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFH

Query:  FYRDGERVDEMFGTGEERLHDRLWLHS
        FYRDGERVDEMFGTGEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGTGEERLHDRLWLHS

SwissProt top hitse value%identityAlignment
G4NFB7 Thioredoxin-22.1e-1135.16Show/hide
Query:  QDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE--HIRYTPTFHFYRDGERVDEMFGTGEERL
        QDFKD L     S    ++++ A+WC  C  I P     S+ FP + ++  D+DE P+  +  ++R  PTF  ++DGE+VDE+ G    +L
Subjt:  QDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE--HIRYTPTFHFYRDGERVDEMFGTGEERL

P85801 Thioredoxin H-type1.9e-1231.73Show/hide
Query:  GNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE--TTEHIRYTPTFHFYRDGERVDEMFGTGEERL
        GN+   ++ + +   L +        + N+ A WC  C QI P +  LS N+P + F+  D+DE  +   +  I+ TPTF F RDG++VD++ G  +  L
Subjt:  GNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE--TTEHIRYTPTFHFYRDGERVDEMFGTGEERL

Query:  HDRL
        H ++
Subjt:  HDRL

Q75GM1 Thioredoxin H51.6e-1130.1Show/hide
Query:  GNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE--TTEHIRYTPTFHFYRDGERVDEMFGTGEERL
        GN+   +  +++ + + ++     T V+ + A WC  C    P F  LS  +P + F+  D+DE PE  T   +R TPTF F ++ E +D++ G   E L
Subjt:  GNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE--TTEHIRYTPTFHFYRDGERVDEMFGTGEERL

Query:  HDR
         ++
Subjt:  HDR

Q7XSQ7 Thioredoxin-like 3-37.7e-5173.81Show/hide
Query:  GDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHF
        G+  K GLEG GL    + HGNL+SA SDQ  K +L  +KSSK+ AVINYGASWCRVCSQILP FCR SN F  ++FIYADIDECPETT++IRYTPTFHF
Subjt:  GDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHF

Query:  YRDGERVDEMFGTGEERLHDRLWLHS
        YRDGE+VDEM GTGEERLHDRLWLHS
Subjt:  YRDGERVDEMFGTGEERLHDRLWLHS

Q8LCH9 Thioredoxin-like 3-34.9e-4570.16Show/hide
Query:  KKGLEGAGL--DPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYR
        K+  EGA L  +   N +GN+K A +DQ F  +L  IKSSK+ AVINYGASWC VCSQILPAF +LSN+F K+ F+YADIDECPETT HIRYTPTF FYR
Subjt:  KKGLEGAGL--DPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYR

Query:  DGERVDEMFGTGEERLHDRLWLHS
        DGE+VDEMFG GE+RLHDRLWLHS
Subjt:  DGERVDEMFGTGEERLHDRLWLHS

Arabidopsis top hitse value%identityAlignment
AT2G35010.1 thioredoxin O15.4e-0728.42Show/hide
Query:  SDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYT--PTFHFYRDGERVDEMFGTGEERL
        S+++F + + + +     +V  + A+WC  C  I P    LS  +P V+    DIDE     T   +  T  PT HF++ G +  E+ G    +L
Subjt:  SDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYT--PTFHFYRDGERVDEMFGTGEERL

AT2G35010.2 thioredoxin O15.4e-0728.42Show/hide
Query:  SDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYT--PTFHFYRDGERVDEMFGTGEERL
        S+++F + + + +     +V  + A+WC  C  I P    LS  +P V+    DIDE     T   +  T  PT HF++ G +  E+ G    +L
Subjt:  SDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYT--PTFHFYRDGERVDEMFGTGEERL

AT2G42580.1 tetratricopetide-repeat thioredoxin-like 31.0e-0529.2Show/hide
Query:  VNRHGNLKSASSDQDFKDVLLQIKSSKTTA-----VINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYTPTFHFYRDGERVDE
        +NR    KS   + + + V    K  K+ A     V ++ +S  R C +I P    L   +P V F   D++E       E IR  PTF  Y++G++V E
Subjt:  VNRHGNLKSASSDQDFKDVLLQIKSSKTTA-----VINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYTPTFHFYRDGERVDE

Query:  MFGTGEERLHDRL
        M     + L D +
Subjt:  MFGTGEERLHDRL

AT3G53220.1 Thioredoxin superfamily protein3.4e-4670.16Show/hide
Query:  KKGLEGAGL--DPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYR
        K+  EGA L  +   N +GN+K A +DQ F  +L  IKSSK+ AVINYGASWC VCSQILPAF +LSN+F K+ F+YADIDECPETT HIRYTPTF FYR
Subjt:  KKGLEGAGL--DPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYR

Query:  DGERVDEMFGTGEERLHDRLWLHS
        DGE+VDEMFG GE+RLHDRLWLHS
Subjt:  DGERVDEMFGTGEERLHDRLWLHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACAAGGGGAAGAAGGGGCTAGAAGGCGCTGGTTTGGATCCTACAGTCAATCGCCATGGCAACTTGAAGAGTGCTTCTAGCGATCAAGATTTCAAGGATGTTCT
TCTTCAAATCAAGTCCTCAAAAACCACTGCAGTTATCAATTATGGTGCATCCTGGTGTCGTGTATGCAGTCAAATTCTTCCAGCATTCTGTCGGCTGAGTAACAATTTTC
CAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGTCCAGAAACAACTGAACACATCCGATACACCCCGACATTTCATTTTTATCGCGACGGTGAAAGAGTAGACGAG
ATGTTTGGTACTGGGGAAGAACGACTGCACGACCGGTTGTGGTTGCATTCCTAA
mRNA sequenceShow/hide mRNA sequence
AAAATAATGGATAACGCAAGCTAGAAAAGAGAGATTGAATTCTCTTCGGCAATCAAATTTGGAAGCAGTAGCCGCCGTACACCCAAAAGCGGATGGGAGACAAGGGGAAG
AAGGGGCTAGAAGGCGCTGGTTTGGATCCTACAGTCAATCGCCATGGCAACTTGAAGAGTGCTTCTAGCGATCAAGATTTCAAGGATGTTCTTCTTCAAATCAAGTCCTC
AAAAACCACTGCAGTTATCAATTATGGTGCATCCTGGTGTCGTGTATGCAGTCAAATTCTTCCAGCATTCTGTCGGCTGAGTAACAATTTTCCAAAGGTTTCTTTCATCT
ATGCAGATATTGATGAATGTCCAGAAACAACTGAACACATCCGATACACCCCGACATTTCATTTTTATCGCGACGGTGAAAGAGTAGACGAGATGTTTGGTACTGGGGAA
GAACGACTGCACGACCGGTTGTGGTTGCATTCCTAAAGCCAGGTTAGATTAACCACCACATCATCATCATTTGTCATCATCAGTTATGAGGATGAGGAATACACACTGAT
AGTTAGGTTGGTAATGGCTCTGTTTTGGTATTTGGTTCAGAAATTGAGCTCATTTCTGTATCCATCTCATTCTCTTTATAAACAAGATCATTTCTAGTAAGCATTTCATT
TTATCCTCTTATGAAGTCATGTAGATTGTTCTTAAAGGTAGATTTACAATGGATACTCGGTTTCTTTTGACATCTAAATCACTAGTGTCAAGTGGGAAAATGCATTTTTT
AGGTGAATTTGAAGCACAACTTGTTCACGATCACCTCGAGAGTTGAAAGTCGATATAAAAAAATTACAACATTGTAAAATCCAAGGCAGTCACAGCACAGTTGGATCTGG
AAGCAACAGTAATAAGGGTAGATTTTTTACT
Protein sequenceShow/hide protein sequence
MGDKGKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDE
MFGTGEERLHDRLWLHS