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Carg25576 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25576
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box protein At5g39250-like
Genome locationCarg_Chr14:7603770..7604644
RNA-Seq ExpressionCarg25576
SyntenyCarg25576
Gene Ontology termsNA
InterPro domainsIPR044207 - F-box protein At5g39250-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581678.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]3.9e-52100Show/hide
Query:  MILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
Subjt:  MILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDE
        TKDE
Subjt:  TKDE

KAG7018165.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-68100Show/hide
Query:  MITYGNDCVEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGV
        MITYGNDCVEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGV
Subjt:  MITYGNDCVEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGV

Query:  VDVNGIVMDFCDVAKTKDEHSLLQQCG
        VDVNGIVMDFCDVAKTKDEHSLLQQCG
Subjt:  VDVNGIVMDFCDVAKTKDEHSLLQQCG

XP_022930578.1 F-box protein At5g39250-like [Cucurbita moschata]2.7e-5397.27Show/hide
Query:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD
        EGPGFKM LAVEPGFSISIFDTMSVSVLVRCKNSNK TQVVNKSVFDYFDKMS RAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD
Subjt:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD

Query:  FCDVAKTKDE
        FCDVAKTKDE
Subjt:  FCDVAKTKDE

XP_022979540.1 F-box protein At5g39250-like [Cucurbita maxima]8.2e-5091.82Show/hide
Query:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD
        EGPGFKM LAVEPGFSISI DTMSVSVLVRCKNSNK   +VNKS+FDYFDKMSCRAFCFDYLDFSHLYP VSGIRAWVSLLFLD NENDGVVDVNGIVMD
Subjt:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD

Query:  FCDVAKTKDE
        FCDVAKTKDE
Subjt:  FCDVAKTKDE

XP_023001983.1 F-box protein At5g39250-like [Cucurbita maxima]1.6e-3267.57Show/hide
Query:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM
        +E PGFKM LAVEPGFSI + DT+SVSV+V  K+S+K  Q+VNKS+FDY D+ SCR F +DYLDF HLYPLVSGIR  +S LFL N  N GV DV+GIVM
Subjt:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM

Query:  DFCDVAKTKDE
        DF DVA TK+E
Subjt:  DFCDVAKTKDE

TrEMBL top hitse value%identityAlignment
A0A6J1EVM4 F-box protein At5g39250-like1.3e-5397.27Show/hide
Query:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD
        EGPGFKM LAVEPGFSISIFDTMSVSVLVRCKNSNK TQVVNKSVFDYFDKMS RAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD
Subjt:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD

Query:  FCDVAKTKDE
        FCDVAKTKDE
Subjt:  FCDVAKTKDE

A0A6J1H6B9 F-box protein At5g392502.9e-3267.57Show/hide
Query:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM
        +E P FKM L V+P FSI I  T+SVSVLV  K+SNK  ++VNKSVFDY D+ S R   FDYLDFS LYP VSGIRAW+SLLFLD+  NDG++DV GIVM
Subjt:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM

Query:  DFCDVAKTKDE
        DFCD A TKDE
Subjt:  DFCDVAKTKDE

A0A6J1ITK0 F-box protein At5g39250-like4.0e-5091.82Show/hide
Query:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD
        EGPGFKM LAVEPGFSISI DTMSVSVLVRCKNSNK   +VNKS+FDYFDKMSCRAFCFDYLDFSHLYP VSGIRAWVSLLFLD NENDGVVDVNGIVMD
Subjt:  EGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMD

Query:  FCDVAKTKDE
        FCDVAKTKDE
Subjt:  FCDVAKTKDE

A0A6J1KS59 F-box protein At5g39250-like7.5e-3367.57Show/hide
Query:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM
        +E PGFKM LAVEPGFSI + DT+SVSV+V  K+S+K  Q+VNKS+FDY D+ SCR F +DYLDF HLYPLVSGIR  +S LFL N  N GV DV+GIVM
Subjt:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM

Query:  DFCDVAKTKDE
        DF DVA TK+E
Subjt:  DFCDVAKTKDE

A0A6J1KTX3 F-box protein At5g39250-like2.9e-3267.57Show/hide
Query:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM
        +E P FKM L V+P FSI I  T+SVSVLV  K+SNK  ++VNKSVFDY D+ S R   FDYLDFS LYP VSGIRAW+SLLFLD+  NDG++DV GIVM
Subjt:  VEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVM

Query:  DFCDVAKTKDE
        DFCD A TKDE
Subjt:  DFCDVAKTKDE

SwissProt top hitse value%identityAlignment
Q9FL82 F-box protein At5g392508.6e-2651.82Show/hide
Query:  PGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMD
        P +KM++  EP F+I +  ++SVSVLV   +S+K  +++N+SVFDY D+ S RA  F+YLD S  YP +SGIRAW+SLLF+D  +  +DG++DV GI +D
Subjt:  PGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMD

Query:  FCDVAKTKDE
        F DVA TK+E
Subjt:  FCDVAKTKDE

Arabidopsis top hitse value%identityAlignment
AT5G39250.1 F-box family protein6.1e-2751.82Show/hide
Query:  PGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMD
        P +KM++  EP F+I +  ++SVSVLV   +S+K  +++N+SVFDY D+ S RA  F+YLD S  YP +SGIRAW+SLLF+D  +  +DG++DV GI +D
Subjt:  PGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMD

Query:  FCDVAKTKDE
        F DVA TK+E
Subjt:  FCDVAKTKDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACTTATGGAAATGACTGTGTGGAAGGCCCGGGGTTCAAGATGATTCTAGCAGTTGAGCCAGGATTCTCAATTTCTATATTTGATACCATGAGTGTATCCGTGCT
CGTGAGATGCAAGAATTCCAACAAAGGTACTCAAGTAGTCAATAAATCTGTATTTGATTATTTCGATAAAATGTCATGTAGGGCATTTTGTTTTGACTATCTTGATTTCT
CCCATCTCTACCCTCTTGTCTCTGGAATTCGAGCATGGGTCTCATTGCTTTTCTTGGACAACAATGAAAATGACGGTGTAGTTGATGTTAATGGGATAGTAATGGATTTT
TGTGATGTTGCAAAGACAAAAGATGAGCATAGTCTTTTGCAACAATGCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTACTTATGGAAATGACTGTGTGGAAGGCCCGGGGTTCAAGATGATTCTAGCAGTTGAGCCAGGATTCTCAATTTCTATATTTGATACCATGAGTGTATCCGTGCT
CGTGAGATGCAAGAATTCCAACAAAGGTACTCAAGTAGTCAATAAATCTGTATTTGATTATTTCGATAAAATGTCATGTAGGGCATTTTGTTTTGACTATCTTGATTTCT
CCCATCTCTACCCTCTTGTCTCTGGAATTCGAGCATGGGTCTCATTGCTTTTCTTGGACAACAATGAAAATGACGGTGTAGTTGATGTTAATGGGATAGTAATGGATTTT
TGTGATGTTGCAAAGACAAAAGATGAGCATAGTCTTTTGCAACAATGCGGCTAA
Protein sequenceShow/hide protein sequence
MITYGNDCVEGPGFKMILAVEPGFSISIFDTMSVSVLVRCKNSNKGTQVVNKSVFDYFDKMSCRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDF
CDVAKTKDEHSLLQQCG