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Carg25596 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25596
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB36-like
Genome locationCarg_Chr12:9723505..9724979
RNA-Seq ExpressionCarg25596
SyntenyCarg25596
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586199.1 Transcription factor MYB36, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6358.05Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI                                                       
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------

Query:  ----------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQESLFWWC
                                                GFQTAFSFDSTS LWP VSA GSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQESLFWWC
Subjt:  ----------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQESLFWWC

Query:  NDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        NDFDANSAAASNLWETTSALQSDGILQDFE+LGYTL
Subjt:  NDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

KAG7021026.1 Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-78100Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQES
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQES
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQES

Query:  LFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        LFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
Subjt:  LFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

XP_022938000.1 transcription factor MYB36-like [Cucurbita moschata]4.5e-6557.79Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI                                                       
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------

Query:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
                                                        GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
Subjt:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC

Query:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
Subjt:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

XP_022965905.1 transcription factor MYB36-like [Cucurbita maxima]6.1e-6255.33Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI                                                       
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------

Query:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
                                                        GFQTAFSFDSTS LWPPVSA GSLVNGECSLEGCTGKSPVGSSSA KEMNDC
Subjt:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC

Query:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        QESLFWWCNDFD NSAAASNLWETT+ALQSDGILQDFELLG+TL
Subjt:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

XP_023537976.1 transcription factor MYB36-like [Cucurbita pepo subsp. pepo]3.2e-6356.15Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI                                                       
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------

Query:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
                                                        GFQTAFSFDSTS LWPPVSA GSLVNGEC+LEGCTGKSPVGSSSAAKEMNDC
Subjt:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC

Query:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFE+LGYTL
Subjt:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

TrEMBL top hitse value%identityAlignment
A0A1S3BTZ9 transcription factor MYB363.6e-2030.17Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGF-----------------------------------------------------
        MGRAPCC+K+ VKKGPWSPEEDEKLK+YI LHGT  NWIALP+KIG                                                      
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGF-----------------------------------------------------

Query:  -----------------------------------------------------------QTAFSFDSTSMLWPPVSA-------SGSLVN------GECS
                                                                   Q+ FSF++ S LWPP+S        +G L N        CS
Subjt:  -----------------------------------------------------------QTAFSFDSTSMLWPPVSA-------SGSLVN------GECS

Query:  -----LEG----CT-GKSPVGSSSA-----------------AKEMNDCQESLFWWCNDFDANSAAASNLWETTSA--LQSDGILQDFELLGYTL
             LEG    CT  KSP  SS +                  KEM+  +ESL+WW  DFDA S  A+ LWET ++  +Q +GI +DFE L ++L
Subjt:  -----LEG----CT-GKSPVGSSSA-----------------AKEMNDCQESLFWWCNDFDANSAAASNLWETTSA--LQSDGILQDFELLGYTL

A0A6I9SPU4 transcription factor RAX31.7e-1785.42Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDKDNVKKGPWSPEED KLKAYI+ HGTGGNWI LP KIG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

A0A6J1DIT5 transcription factor MYB36-like2.7e-2333.85Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ----------------------------------------------------
        MGRA CCDKD VKKG WS EEDEKLKAYIQ +GTGGNWIALPNKIG +                                                    
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ----------------------------------------------------

Query:  ---------------------------------------------------TAFSFDSTSMLWPPVSA--SGSLVNGECSLEGCTGKSPVGSSSA-----
                                                            ++S  + + LWP VS      +V G+       GKS +GSSS      
Subjt:  ---------------------------------------------------TAFSFDSTSMLWPPVSA--SGSLVNGECSLEGCTGKSPVGSSSA-----

Query:  ------AKEMNDCQESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
               KEM+D +ESL WWC+DFDA SAAA +LW T S   ++GI QD ELLGY L
Subjt:  ------AKEMNDCQESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

A0A6J1FIE9 transcription factor MYB36-like2.2e-6557.79Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI                                                       
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------

Query:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
                                                        GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
Subjt:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC

Query:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
Subjt:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

A0A6J1HQ22 transcription factor MYB36-like3.0e-6255.33Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------
        MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI                                                       
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKI-------------------------------------------------------

Query:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC
                                                        GFQTAFSFDSTS LWPPVSA GSLVNGECSLEGCTGKSPVGSSSA KEMNDC
Subjt:  ------------------------------------------------GFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDC

Query:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL
        QESLFWWCNDFD NSAAASNLWETT+ALQSDGILQDFELLG+TL
Subjt:  QESLFWWCNDFDANSAAASNLWETTSALQSDGILQDFELLGYTL

SwissProt top hitse value%identityAlignment
F4JSU0 Transcription factor MYB874.4e-1570.83Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK  VKKGPWS EED  LK+YI+ HGTG NWI+LP +IG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

Q9FG68 Transcription factor RAX19.9e-1566.67Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK  VK+GPWSPEED KL+ YI+ +G GGNWI+ P K G +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

Q9FKL2 Transcription factor MYB367.3e-1881.25Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVKKGPWSPEED KLK YI  +GTGGNWIALP KIG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

Q9M2Y9 Transcription factor RAX34.3e-1881.25Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVKKGPWSPEED KLK+YI+  GTGGNWIALP KIG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

Q9SJL7 Transcription factor RAX23.6e-1777.08Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVK+GPWSPEED KLK YI+  GTGGNWIALP+K G +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

Arabidopsis top hitse value%identityAlignment
AT2G36890.1 Duplicated homeodomain-like superfamily protein2.6e-1877.08Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVK+GPWSPEED KLK YI+  GTGGNWIALP+K G +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

AT3G49690.1 myb domain protein 843.1e-1981.25Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVKKGPWSPEED KLK+YI+  GTGGNWIALP KIG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

AT4G37780.1 myb domain protein 873.2e-1670.83Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK  VKKGPWS EED  LK+YI+ HGTG NWI+LP +IG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

AT5G57620.1 myb domain protein 365.2e-1981.25Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVKKGPWSPEED KLK YI  +GTGGNWIALP KIG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ

AT5G65790.1 myb domain protein 686.8e-1981.25Show/hide
Query:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ
        MGRAPCCDK NVKKGPWSPEED KLK YI+  GTGGNWIALP KIG +
Subjt:  MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGAGCACCATGCTGTGACAAAGACAACGTAAAGAAAGGGCCATGGTCGCCTGAAGAAGATGAGAAGCTCAAGGCTTATATCCAACTCCATGGGACTGGTGGCAA
TTGGATTGCTCTTCCCAACAAAATAGGCTTTCAAACCGCCTTCTCTTTCGACAGCACCTCCATGCTCTGGCCTCCGGTGTCGGCCAGTGGGAGCCTTGTCAATGGTGAGT
GCAGTCTGGAAGGGTGCACGGGGAAGAGTCCGGTCGGTTCGAGCTCGGCGGCGAAGGAAATGAATGATTGTCAAGAGAGTTTGTTTTGGTGGTGTAATGATTTTGATGCA
AATTCTGCAGCTGCTTCGAACCTTTGGGAGACTACTTCAGCTCTTCAATCCGATGGGATTCTTCAAGATTTTGAACTTCTTGGTTACACTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGAGCACCATGCTGTGACAAAGACAACGTAAAGAAAGGGCCATGGTCGCCTGAAGAAGATGAGAAGCTCAAGGCTTATATCCAACTCCATGGGACTGGTGGCAA
TTGGATTGCTCTTCCCAACAAAATAGGCTTTCAAACCGCCTTCTCTTTCGACAGCACCTCCATGCTCTGGCCTCCGGTGTCGGCCAGTGGGAGCCTTGTCAATGGTGAGT
GCAGTCTGGAAGGGTGCACGGGGAAGAGTCCGGTCGGTTCGAGCTCGGCGGCGAAGGAAATGAATGATTGTCAAGAGAGTTTGTTTTGGTGGTGTAATGATTTTGATGCA
AATTCTGCAGCTGCTTCGAACCTTTGGGAGACTACTTCAGCTCTTCAATCCGATGGGATTCTTCAAGATTTTGAACTTCTTGGTTACACTCTTTAG
Protein sequenceShow/hide protein sequence
MGRAPCCDKDNVKKGPWSPEEDEKLKAYIQLHGTGGNWIALPNKIGFQTAFSFDSTSMLWPPVSASGSLVNGECSLEGCTGKSPVGSSSAAKEMNDCQESLFWWCNDFDA
NSAAASNLWETTSALQSDGILQDFELLGYTL