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Carg25601 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25601
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:5185202..5185498
RNA-Seq ExpressionCarg25601
SyntenyCarg25601
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042343.1 hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa]2.7e-3283.87Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        IQ K+LQHKDQ+TVVAAVSVV+SLFVY APRFLSILAFFWPLF STAVLLV MTAFGGGFQVG+E+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

KAG6573520.1 hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia]7.5e-4398.98Show/hide
Query:  MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGE+AGERILDYVAGRPEYAEYQYKYQ
Subjt:  MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2068.42Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAM-TAFGGGFQVGTEVHGER-AGERILDYVAGRPEYAEYQYKYQ
        +QTKVLQ+KDQ+TVVAAVSVV+SLF          LAFFWPLF STA LLV M  AF GGFQVGT++HG R AGE ILDYVAGRPEY +  YKY+
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAM-TAFGGGFQVGTEVHGER-AGERILDYVAGRPEYAEYQYKYQ

KAG7012637.1 hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-43100Show/hide
Query:  MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
Subjt:  MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

KGN64996.1 hypothetical protein Csa_022896 [Cucumis sativus]1.2e-3286.02Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        I  KVLQHKDQLTVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGGGFQVGTE+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

TrEMBL top hitse value%identityAlignment
A0A061GGG1 Uncharacterized protein1.5e-1751.61Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        IQ K++Q++   T+    S +++  +Y APR L+IL +FWPLF ST V LVA+ AFGGG Q+ TEVHGE+AG+ ++DYVA RPE+AE   K++
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

A0A0A0LYI8 Uncharacterized protein5.8e-3386.02Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        I  KVLQHKDQLTVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGGGFQVGTE+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

A0A2N9EZM9 Uncharacterized protein7.6e-1758.82Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEY
        I  K+LQ++  LT+ A V +V+SL +YAAPR ++ILAFFWPLF STAVLL+A+ AFGG  Q  TE HG +AG+ IL+YV G+PE+
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEY

A0A396J444 Uncharacterized protein1.2e-1752.58Show/hide
Query:  DIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYA-EYQYKY
        D  V+  K+L+++ Q+T+   +S+V SL +Y AP FL++LA+FWPLF ST V LVA+ AFGG  +  TE HGE+AGE +LDYVAG+PE+  E QY +
Subjt:  DIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYA-EYQYKY

A0A5D3CU44 Uncharacterized protein1.3e-3283.87Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ
        IQ K+LQHKDQ+TVVAAVSVV+SLFVY APRFLSILAFFWPLF STAVLLV MTAFGGGFQVG+E+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein7.8e-0639.53Show/hide
Query:  KVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQV---GTEVHGERAG-----ERILDYVAG
        K+L+ K Q+     +S++    V  +P FL++L++FWPLFLSTA+ L A+  F     +    T + GE AG     E ILDYV G
Subjt:  KVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQV---GTEVHGERAG-----ERILDYVAG

AT4G16400.1 unknown protein2.1e-1452.38Show/hide
Query:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPE
        IQ K+++++    V   VSV+++  VYAAPR L+ILA+FWPLF STA  L AM    GGFQ   ++  E  GER++DYVAGRPE
Subjt:  IQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCAGGTCATTCAAACAAAGGTTCTCCAACACAAAGACCAGCTAACTGTTGTAGCAGCAGTTTCAGTGGTTATGTCATTGTTCGTATATGCAGCGCCCCGGTT
TCTAAGTATTCTAGCATTCTTTTGGCCTCTCTTTCTCTCCACAGCCGTACTTTTGGTGGCAATGACAGCCTTTGGAGGAGGTTTCCAAGTTGGAACCGAAGTTCATGGTG
AGAGAGCAGGTGAAAGGATCCTAGATTATGTAGCAGGACGGCCTGAATACGCCGAATACCAATACAAGTACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCAGGTCATTCAAACAAAGGTTCTCCAACACAAAGACCAGCTAACTGTTGTAGCAGCAGTTTCAGTGGTTATGTCATTGTTCGTATATGCAGCGCCCCGGTT
TCTAAGTATTCTAGCATTCTTTTGGCCTCTCTTTCTCTCCACAGCCGTACTTTTGGTGGCAATGACAGCCTTTGGAGGAGGTTTCCAAGTTGGAACCGAAGTTCATGGTG
AGAGAGCAGGTGAAAGGATCCTAGATTATGTAGCAGGACGGCCTGAATACGCCGAATACCAATACAAGTACCAATAA
Protein sequenceShow/hide protein sequence
MDIQVIQTKVLQHKDQLTVVAAVSVVMSLFVYAAPRFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGERILDYVAGRPEYAEYQYKYQ