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Carg25604 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25604
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAcyl carrier protein
Genome locationCarg_Chr18:5207227..5208708
RNA-Seq ExpressionCarg25604
SyntenyCarg25604
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR036736 - ACP-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583746.1 Acyl carrier protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1186.96Show/hide
Query:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        +SSDEIVDRVIGLVKKFD + ACKVTETADFQKDLSLDSLDRV+ V
Subjt:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

KAG7012640.1 Acyl carrier protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-116100Show/hide
Query:  MGKSVFPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSVSFSSPIDVGSHNPPPFRVQCSRWHSAQYPHWHLFLSPIDVGP
        MGKSVFPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSVSFSSPIDVGSHNPPPFRVQCSRWHSAQYPHWHLFLSPIDVGP
Subjt:  MGKSVFPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSVSFSSPIDVGSHNPPPFRVQCSRWHSAQYPHWHLFLSPIDVGP

Query:  PLNPSPSGPSVLAGTRFFLQSMWDHHQIHPPFRAQRPYCTPPRVYLPSGNNLFVGTSSDDLTIELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQSTL
        PLNPSPSGPSVLAGTRFFLQSMWDHHQIHPPFRAQRPYCTPPRVYLPSGNNLFVGTSSDDLTIELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQSTL
Subjt:  PLNPSPSGPSVLAGTRFFLQSMWDHHQIHPPFRAQRPYCTPPRVYLPSGNNLFVGTSSDDLTIELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQSTL

Query:  LPYMV
        LPYMV
Subjt:  LPYMV

KAG7020733.1 Transcription factor PRE6, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-1241.43Show/hide
Query:  SFSSPIDVGSHNPPPF----------------RVQCSRWHSAQYPHWHLFLSPIDVG----PPLNPS-----------PSGPSVLAGTRFFLQSMWDHHQ
        SF S IDVGSHNPPPF                 +       AQ P WHLFLSPID G    PP   S           PSGP+V AGTR  LQSMWD   
Subjt:  SFSSPIDVGSHNPPPF----------------RVQCSRWHSAQYPHWHLFLSPIDVG----PPLNPS-----------PSGPSVLAGTRFFLQSMWDHHQ

Query:  IHPPFRAQRPYCTPP--------RVYLPSGNNLFVGTSSD
        IH P R+     T           ++LPSG ++  GT SD
Subjt:  IHPPFRAQRPYCTPP--------RVYLPSGNNLFVGTSSD

XP_022925341.1 uncharacterized protein LOC111432627 isoform X2 [Cucurbita moschata]2.6e-1397.78Show/hide
Query:  GSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVD
        GSSSDEIVDRVIGLVKKFD VVACKVTETADFQKDLSLDSLDRVD
Subjt:  GSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVD

XP_038895695.1 acyl carrier protein 3, mitochondrial [Benincasa hispida]1.1e-1185.42Show/hide
Query:  SGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        +G SSDEIVDRVIGLVKKFD + ACKVTETADFQKDLSLDSLDRV+ V
Subjt:  SGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

TrEMBL top hitse value%identityAlignment
A0A1S3CK44 Acyl carrier protein5.9e-1181.25Show/hide
Query:  SGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        +G SS+EI DRVIGLVKKFD + ACKVTETADFQKDLSLDSLDRV+ V
Subjt:  SGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

A0A6J1EBY5 uncharacterized protein LOC111432627 isoform X21.3e-1397.78Show/hide
Query:  GSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVD
        GSSSDEIVDRVIGLVKKFD VVACKVTETADFQKDLSLDSLDRVD
Subjt:  GSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVD

A0A6J1EKQ6 Acyl carrier protein2.0e-1186.96Show/hide
Query:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        +SSDEIVDRVIGLVKKFD + ACKVTETADFQKDLSLDSLDRV+ V
Subjt:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

A0A6J1ENM4 Acyl carrier protein2.0e-1186.96Show/hide
Query:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        +SSDEIVDRVIGLVKKFD + ACKVTETADFQKDLSLDSLDRV+ V
Subjt:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

A0A6J1KJ66 Acyl carrier protein2.0e-1186.96Show/hide
Query:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        +SSDEIVDRVIGLVKKFD + ACKVTETADFQKDLSLDSLDRV+ V
Subjt:  SSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

SwissProt top hitse value%identityAlignment
O80800 Acyl carrier protein 2, mitochondrial6.7e-0454.76Show/hide
Query:  EIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        E+ DRV+ +VK F  V   KVT  A+FQ DL LDSLD V+ V
Subjt:  EIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

P53665 Acyl carrier protein 1, mitochondrial8.8e-0447.17Show/hide
Query:  FPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        F   D   S + +VDRV+ +VK F  V   KVT    FQ DL LDSLD V+ V
Subjt:  FPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

Q9FGJ4 Acyl carrier protein 3, mitochondrial1.9e-0662.79Show/hide
Query:  DEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        D+I+ RVI LVKK+D     +VTE ADFQKDLSLDSLD+ + V
Subjt:  DEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

Arabidopsis top hitse value%identityAlignment
AT1G65290.1 mitochondrial acyl carrier protein 24.8e-0554.76Show/hide
Query:  EIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        E+ DRV+ +VK F  V   KVT  A+FQ DL LDSLD V+ V
Subjt:  EIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

AT2G44620.1 mitochondrial acyl carrier protein 16.2e-0547.17Show/hide
Query:  FPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        F   D   S + +VDRV+ +VK F  V   KVT    FQ DL LDSLD V+ V
Subjt:  FPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

AT5G47630.1 mitochondrial acyl carrier protein 31.3e-0762.79Show/hide
Query:  DEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        D+I+ RVI LVKK+D     +VTE ADFQKDLSLDSLD+ + V
Subjt:  DEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

AT5G47630.1 mitochondrial acyl carrier protein 39.0e-0458.33Show/hide
Query:  ELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQST
        ELVMA +++FSIEIPDE ADKL  C  V    L  T
Subjt:  ELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQST

AT5G47630.2 mitochondrial acyl carrier protein 31.3e-0762.79Show/hide
Query:  DEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV
        D+I+ RVI LVKK+D     +VTE ADFQKDLSLDSLD+ + V
Subjt:  DEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSV

AT5G47630.2 mitochondrial acyl carrier protein 39.0e-0458.33Show/hide
Query:  ELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQST
        ELVMA +++FSIEIPDE ADKL  C  V    L  T
Subjt:  ELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAATCTGTATTTCCCTTCAAGGACTCTGGTTCAAGTTCTGACGAAATAGTTGATCGGGTGATTGGATTGGTTAAGAAATTCGATAGTGTCGTTGCCTGTAAGGT
TACTGAAACGGCCGATTTCCAGAAAGACTTAAGTCTGGACAGTTTGGACAGGGTGGATAGTGTTTCGTTCTCTTCCCCAATCGACGTGGGATCTCACAATCCACCTCCAT
TCAGGGTCCAGTGTTCTCGCTGGCACTCGGCTCAGTATCCTCACTGGCACTTGTTCCTTTCTCCAATTGATGTGGGACCACCACTAAATCCATCCCCTTCAGGGCCCAGC
GTCCTCGCTGGCACTCGTTTCTTTCTCCAATCAATGTGGGACCACCATCAAATCCACCCCCCCTTCAGGGCCCAGCGTCCTTACTGCACACCGCCTCGTGTCTACCTCCC
TTCGGGGAACAACCTCTTTGTTGGCACATCGTCCGATGATCTCACTATAGAGCTTGTAATGGCATTCAAACAAGATTTCTCCATTGAAATACCAGATGAAAATGCTGATA
AGCTTATTTTCTGTGCCGTTGTACAGGAGGACTCGTTGCAGTCGACACTTCTGCCATATATGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAATCTGTATTTCCCTTCAAGGACTCTGGTTCAAGTTCTGACGAAATAGTTGATCGGGTGATTGGATTGGTTAAGAAATTCGATAGTGTCGTTGCCTGTAAGGT
TACTGAAACGGCCGATTTCCAGAAAGACTTAAGTCTGGACAGTTTGGACAGGGTGGATAGTGTTTCGTTCTCTTCCCCAATCGACGTGGGATCTCACAATCCACCTCCAT
TCAGGGTCCAGTGTTCTCGCTGGCACTCGGCTCAGTATCCTCACTGGCACTTGTTCCTTTCTCCAATTGATGTGGGACCACCACTAAATCCATCCCCTTCAGGGCCCAGC
GTCCTCGCTGGCACTCGTTTCTTTCTCCAATCAATGTGGGACCACCATCAAATCCACCCCCCCTTCAGGGCCCAGCGTCCTTACTGCACACCGCCTCGTGTCTACCTCCC
TTCGGGGAACAACCTCTTTGTTGGCACATCGTCCGATGATCTCACTATAGAGCTTGTAATGGCATTCAAACAAGATTTCTCCATTGAAATACCAGATGAAAATGCTGATA
AGCTTATTTTCTGTGCCGTTGTACAGGAGGACTCGTTGCAGTCGACACTTCTGCCATATATGGTATGA
Protein sequenceShow/hide protein sequence
MGKSVFPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSVSFSSPIDVGSHNPPPFRVQCSRWHSAQYPHWHLFLSPIDVGPPLNPSPSGPS
VLAGTRFFLQSMWDHHQIHPPFRAQRPYCTPPRVYLPSGNNLFVGTSSDDLTIELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQSTLLPYMV