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Carg25638 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25638
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:11320621..11322734
RNA-Seq ExpressionCarg25638
SyntenyCarg25638
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011932.1 hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0973.21Show/hide
Query:  REGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRLMEMEDVDEDNKVEVILQG
        REGKN AVALDEVIA    KQLVLSL PVG  HLLG LME+E++D DNK E ILQG
Subjt:  REGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRLMEMEDVDEDNKVEVILQG

KAG7012279.1 hypothetical protein SDJN02_25031, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-0753.85Show/hide
Query:  AIGGRESRIIERSFWPRLGDEKQ-----------REGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRL-----MEMEDVDEDNKVEV
        AIGGRESR IERS  P  GDEK            R  +N A ALDEVI  AK KQLVL    +G  +LLG L     MEMED+D D+KVEV
Subjt:  AIGGRESRIIERSFWPRLGDEKQ-----------REGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRL-----MEMEDVDEDNKVEV

KAG7031202.1 hypothetical protein SDJN02_05242 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-0458.18Show/hide
Query:  MEMEDVDEDNKVEVILQGIQLRLLLSTLHHVSNFLLDIMNYHICDCNDMVLIRLG
        MEMED++ DNKVE ILQGI+LRLLL+TLH V +F+           N +VLIRLG
Subjt:  MEMEDVDEDNKVEVILQGIQLRLLLSTLHHVSNFLLDIMNYHICDCNDMVLIRLG

KAG7037605.1 hypothetical protein SDJN02_01234, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-58100Show/hide
Query:  AIGGRESRIIERSFWPRLGDEKQREGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRLMEMEDVDEDNKVEVILQGIQLRLLLSTLHHVSNFLLDIM
        AIGGRESRIIERSFWPRLGDEKQREGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRLMEMEDVDEDNKVEVILQGIQLRLLLSTLHHVSNFLLDIM
Subjt:  AIGGRESRIIERSFWPRLGDEKQREGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRLMEMEDVDEDNKVEVILQGIQLRLLLSTLHHVSNFLLDIM

Query:  NYHICDCNDMVLIRLGY
        NYHICDCNDMVLIRLGY
Subjt:  NYHICDCNDMVLIRLGY

XP_022940726.1 uncharacterized protein LOC111446232 [Cucurbita moschata]3.8e-1766.67Show/hide
Query:  AIGGRESRIIERSFWPRLGDEKQRE-----------------GKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRL
        AIGGRESRIIERSFWPRLGDEKQR                   +   +ALDEVI GAKLKQLVLSLWPVG WHLLGRL
Subjt:  AIGGRESRIIERSFWPRLGDEKQRE-----------------GKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRL

TrEMBL top hitse value%identityAlignment
A0A6J1FJ97 uncharacterized protein LOC1114462321.8e-1766.67Show/hide
Query:  AIGGRESRIIERSFWPRLGDEKQRE-----------------GKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRL
        AIGGRESRIIERSFWPRLGDEKQR                   +   +ALDEVI GAKLKQLVLSLWPVG WHLLGRL
Subjt:  AIGGRESRIIERSFWPRLGDEKQRE-----------------GKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAATCGGAGGAAGAGAGAGCAGAATAATTGAAAGAAGTTTCTGGCCGCGTCTCGGTGATGAAAAACAGAGAGAGGGGAAGAACGCAGCAGTTGCTCTTGATGAAGTGAT
TGCTGGGGCAAAATTAAAGCAATTGGTCCTGTCATTGTGGCCGGTGGGACTTTGGCATCTGCTAGGAAGACTGATGGAAATGGAGGATGTAGATGAAGACAATAAAGTTG
AGGTCATTCTACAAGGAATCCAACTCCGTTTGCTACTTTCAACGCTCCATCATGTAAGTAATTTTCTACTTGACATCATGAACTACCATATATGTGACTGCAATGATATG
GTCCTAATAAGGTTAGGTTAC
mRNA sequenceShow/hide mRNA sequence
GCAATCGGAGGAAGAGAGAGCAGAATAATTGAAAGAAGTTTCTGGCCGCGTCTCGGTGATGAAAAACAGAGAGAGGGGAAGAACGCAGCAGTTGCTCTTGATGAAGTGAT
TGCTGGGGCAAAATTAAAGCAATTGGTCCTGTCATTGTGGCCGGTGGGACTTTGGCATCTGCTAGGAAGACTGATGGAAATGGAGGATGTAGATGAAGACAATAAAGTTG
AGGTCATTCTACAAGGAATCCAACTCCGTTTGCTACTTTCAACGCTCCATCATGTAAGTAATTTTCTACTTGACATCATGAACTACCATATATGTGACTGCAATGATATG
GTCCTAATAAGGTTAGGTTAC
Protein sequenceShow/hide protein sequence
AIGGRESRIIERSFWPRLGDEKQREGKNAAVALDEVIAGAKLKQLVLSLWPVGLWHLLGRLMEMEDVDEDNKVEVILQGIQLRLLLSTLHHVSNFLLDIMNYHICDCNDM
VLIRLGY