; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25667 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25667
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationCarg_Chr04:1411495..1413177
RNA-Seq ExpressionCarg25667
SyntenyCarg25667
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030773.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-153100Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN

XP_022941685.1 probable RNA-binding protein ARP1 isoform X1 [Cucurbita moschata]2.5e-15299.26Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEED+DDNDGKRRAQKN
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN

XP_022941687.1 probable RNA-binding protein ARP1 isoform X2 [Cucurbita moschata]1.2e-13599.59Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP

XP_022992888.1 probable RNA-binding protein ARP1 isoform X1 [Cucurbita maxima]4.8e-14895.31Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTY+ATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEE------DEDDNDGKRRAQKN
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGK GGECMQW+EEEE      D+DD+DGKRRAQ+N
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEE------DEDDNDGKRRAQKN

XP_022992897.1 probable RNA-binding protein ARP1 isoform X2 [Cucurbita maxima]1.6e-13599.17Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTY+ATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein1.6e-12088.54Show/hide
Query:  SNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRS
        S+ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRS
Subjt:  SNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRS

Query:  ASATPPQAPQHPGSNGGGPRTTSAPS--GNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPM
        ASATPPQAPQ PGSN GGPRTTSA +  GNHVQWYYPAGT+PT F HQPHQ VPFYGYSPSPTYIATDISYNHK+GYMNGHY Q+YPGQAMVGANTLMPM
Subjt:  ASATPPQAPQHPGSNGGGPRTTSAPS--GNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPM

Query:  YPLYHYHQSHAMGMPAHIYPPSPT-----AAVPPSSIMSKPASVAPTPGKVGG
        YPLYHYHQSHAMGMPAHI+PPSPT     AAVPP+SIMSKP +V P PG VGG
Subjt:  YPLYHYHQSHAMGMPAHIYPPSPT-----AAVPPSSIMSKPASVAPTPGKVGG

A0A6J1FN68 probable RNA-binding protein ARP1 isoform X25.9e-13699.59Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP

A0A6J1FUE8 probable RNA-binding protein ARP1 isoform X11.2e-15299.26Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEED+DDNDGKRRAQKN
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN

A0A6J1JR76 probable RNA-binding protein ARP1 isoform X27.8e-13699.17Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTY+ATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTP

A0A6J1K0I8 probable RNA-binding protein ARP1 isoform X12.3e-14895.31Show/hide
Query:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
        MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR
Subjt:  MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSR

Query:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
        SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSF HQPHQAVPFYGYSPSPTY+ATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY
Subjt:  SASATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEE------DEDDNDGKRRAQKN
        PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGK GGECMQW+EEEE      D+DD+DGKRRAQ+N
Subjt:  PLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEE------DEDDNDGKRRAQKN

SwissProt top hitse value%identityAlignment
Q5ZMA3 RNA-binding protein 243.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6GQD3 RNA-binding protein 24-A3.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9BX46 RNA-binding protein 241.9e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGEI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B3.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP13.5e-6152.36Show/hide
Query:  SNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA
        SNN  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R      
Subjt:  SNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA

Query:  SATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVG-----YMNGHYRQIYP-----------
          +P Q P++      G R T    GNH QWYYP+G        Q HQAVPFYGY PS  Y+A ++++N KVG     YMNG+Y Q+ P           
Subjt:  SATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVG-----YMNGHYRQIYP-----------

Query:  -------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWK
               G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P S       S  P  G VGGE +Q K
Subjt:  -------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWK

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3841.8Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R       + P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP

Query:  QHPGSNGGGPRTTS---APSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSP-SPTYIATDISYNHKVGYMNGHYRQIY------PGQAMVGANTLMPMY
         H    GGG R  +     S     +  P    P +F+H PH  +  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  QHPGSNGGGPRTTS---APSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSP-SPTYIATDISYNHKVGYMNGHYRQIY------PGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPA----HIYPPSPTAAVPPSSIMSKPASVAP
        P    H       P     H+   +P    PP+  M +  +  P
Subjt:  PLYHYHQSHAMGMPA----HIYPPSPTAAVPPSSIMSKPASVAP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-3842.21Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R       + P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP

Query:  QHPGSNGGGPRTTS---APSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSP-SPTYIATDISYNHKVGYMNGHYRQIY------PGQAMVGANTLMPMY
         H    GGG R  +     S     +  P    P +F+H PH  +  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  QHPGSNGGGPRTTS---APSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSP-SPTYIATDISYNHKVGYMNGHYRQIY------PGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPA----HIYPPSPTAAVPPSSIMSKPASVAP
        P    H       P     H+   +P    PP+  M +   V P
Subjt:  PLYHYHQSHAMGMPA----HIYPPSPTAAVPPSSIMSKPASVAP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.6e-3842.44Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R       + P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP

Query:  QHPGSNGGGPRTTS---APSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSP-SPTYIATDISYNHKVGYMNGHYRQIY------PGQAMVGANTLMPMY
         H    GGG R  +     S     +  P    P +F+H PH  +  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  QHPGSNGGGPRTTS---APSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSP-SPTYIATDISYNHKVGYMNGHYRQIY------PGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPA----HIYPPSPTAAVPPSSIMSK
        P    H       P     H+   +P    PP+  M +
Subjt:  PLYHYHQSHAMGMPA----HIYPPSPTAAVPPSSIMSK

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-6252.36Show/hide
Query:  SNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA
        SNN  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R      
Subjt:  SNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA

Query:  SATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVG-----YMNGHYRQIYP-----------
          +P Q P++      G R T    GNH QWYYP+G        Q HQAVPFYGY PS  Y+A ++++N KVG     YMNG+Y Q+ P           
Subjt:  SATPPQAPQHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVG-----YMNGHYRQIYP-----------

Query:  -------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWK
               G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P S       S  P  G VGGE +Q K
Subjt:  -------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWK

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-4648.58Show/hide
Query:  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR-RGSRSASATPPQAPQHPGSNGGGPRTTSAPSGNH
        M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R R      ATPP                    GNH
Subjt:  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR-RGSRSASATPPQAPQHPGSNGGGPRTTSAPSGNH

Query:  VQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVG-----YMNGHYRQIYP------------------GQAMVG-ANTLMPMYPLYHYH
         QWYYP+G        Q HQAVPFYGY PS  Y+A ++++N KVG     YMNG+Y Q+ P                  G+ MVG A+ ++P Y +Y YH
Subjt:  VQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVG-----YMNGHYRQIYP------------------GQAMVG-ANTLMPMYPLYHYH

Query:  QSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWK
        QS A+G       P P+ + P S       S  P  G VGGE +Q K
Subjt:  QSHAMGMPAHIYPPSPTAAVPPSSIMSKPASVAPTPGKVGGECMQWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCAACAATAATGCTGGTCTGTTCGGCGACACTACGCTGACGAAGGTCTTCGTCGGAGGTTTGGCTTGGGAGACTCCCAAGGAAGCGATGAGAGATCACTTCGA
GAAGTTCGGTGAGATCCTGGAGGCGGTTATCATCTCCGATAAACTCACGGGCAGATCCAAGGGCTATGGATTTGTTACATTCAAGGACGCGGAATCGGCGAAGAAGGCTT
GTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGACGTGGCTCGAGGTCGGCTTCGGCTACTCCTCCACAAGCTCCT
CAGCATCCTGGATCGAACGGCGGTGGACCGAGGACGACGTCAGCACCATCGGGGAACCACGTGCAGTGGTACTACCCGGCGGGGACTTACCCGACGTCGTTTAGTCATCA
GCCTCATCAAGCCGTCCCTTTCTACGGATATTCCCCAAGCCCCACTTATATCGCTACCGATATCAGTTACAACCACAAAGTGGGGTACATGAACGGGCATTACAGGCAGA
TATATCCGGGGCAGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATACCCTCCC
AGTCCCACGGCGGCGGTCCCACCTTCCTCCATTATGTCCAAACCGGCCTCCGTCGCTCCCACCCCAGGTAAAGTCGGAGGAGAATGCATGCAATGGAAAGAAGAAGAAGA
AGATGAAGATGATAATGATGGTAAAAGAAGAGCACAGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGCAACAATAATGCTGGTCTGTTCGGCGACACTACGCTGACGAAGGTCTTCGTCGGAGGTTTGGCTTGGGAGACTCCCAAGGAAGCGATGAGAGATCACTTCGA
GAAGTTCGGTGAGATCCTGGAGGCGGTTATCATCTCCGATAAACTCACGGGCAGATCCAAGGGCTATGGATTTGTTACATTCAAGGACGCGGAATCGGCGAAGAAGGCTT
GTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGACGTGGCTCGAGGTCGGCTTCGGCTACTCCTCCACAAGCTCCT
CAGCATCCTGGATCGAACGGCGGTGGACCGAGGACGACGTCAGCACCATCGGGGAACCACGTGCAGTGGTACTACCCGGCGGGGACTTACCCGACGTCGTTTAGTCATCA
GCCTCATCAAGCCGTCCCTTTCTACGGATATTCCCCAAGCCCCACTTATATCGCTACCGATATCAGTTACAACCACAAAGTGGGGTACATGAACGGGCATTACAGGCAGA
TATATCCGGGGCAGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATACCCTCCC
AGTCCCACGGCGGCGGTCCCACCTTCCTCCATTATGTCCAAACCGGCCTCCGTCGCTCCCACCCCAGGTAAAGTCGGAGGAGAATGCATGCAATGGAAAGAAGAAGAAGA
AGATGAAGATGATAATGATGGTAAAAGAAGAGCACAGAAGAATTGA
Protein sequenceShow/hide protein sequence
MMSNNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPQAP
QHPGSNGGGPRTTSAPSGNHVQWYYPAGTYPTSFSHQPHQAVPFYGYSPSPTYIATDISYNHKVGYMNGHYRQIYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIYPP
SPTAAVPPSSIMSKPASVAPTPGKVGGECMQWKEEEEDEDDNDGKRRAQKN