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Carg25672 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25672
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr04:1442565..1442942
RNA-Seq ExpressionCarg25672
SyntenyCarg25672
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600108.1 hypothetical protein SDJN03_05341, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4596.84Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHDELQYSMNRFAVIVAVLWVFLHSIE
        MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHD+L+YSMNRFAVIVAVLWVFLHSI+
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHDELQYSMNRFAVIVAVLWVFLHSIE
KAG7030778.1 hypothetical protein SDJN02_04815, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-46100Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHDELQYSMNRFAVIVAVLWVFLHSIE
        MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHDELQYSMNRFAVIVAVLWVFLHSIE
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHDELQYSMNRFAVIVAVLWVFLHSIE
XP_022139122.1 uncharacterized protein LOC111010108 [Momordica charantia]1.7e-2385.71Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MG+VVVISLPLILFC LLGFGCYF+GRAKGRQDIRTNAQVFGVP PPPGS  AH PPPP PLFK DNSA+
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
XP_022942625.1 uncharacterized protein LOC111447607 [Cucurbita moschata]8.4e-3197.14Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MGMV+VISLPLILFCFLLGFGCYF+GRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
XP_022988565.1 uncharacterized protein LOC111485766 [Cucurbita maxima]1.2e-2997.14Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGS LAHPPPPPEPLFKPDNSA+
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
TrEMBL top hitse value%identityAlignment
A0A1S3BED6 uncharacterized protein LOC1034887521.5e-2277.14Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGSG AH P   +P+FKP+N+ +
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
A0A5A7SXY6 Uncharacterized protein1.5e-2277.14Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGSG AH P   +P+FKP+N+ +
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
A0A6J1CD47 uncharacterized protein LOC1110101088.2e-2485.71Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MG+VVVISLPLILFC LLGFGCYF+GRAKGRQDIRTNAQVFGVP PPPGS  AH PPPP PLFK DNSA+
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
A0A6J1FWM8 uncharacterized protein LOC1114476074.0e-3197.14Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MGMV+VISLPLILFCFLLGFGCYF+GRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
A0A6J1JJX6 uncharacterized protein LOC1114857665.8e-3097.14Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
        MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGS LAHPPPPPEPLFKPDNSA+
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31335.1 unknown protein5.4e-2069.12Show/hide
Query:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNS
        MG+VVVISLPLI FC LLGFGCYFLG+++GR++IRTN QV+G PAPPPG+ +A   PP  P  KPDNS
Subjt:  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGTGGTGGTCATCTCTCTGCCGTTGATTCTCTTCTGCTTCTTGCTTGGTTTTGGCTGTTACTTTCTAGGCAGAGCTAAAGGGAGACAGGACATTCGGACTAA
TGCCCAGGTCTTTGGGGTGCCGGCGCCACCTCCCGGTAGCGGTCTCGCCCATCCTCCGCCACCGCCGGAGCCGCTTTTCAAACCTGATAATTCAGCCCATGATGAACTTC
AATACTCCATGAATCGTTTTGCTGTTATTGTGGCTGTTCTATGGGTGTTTCTGCATTCAATCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGGTGGTGGTCATCTCTCTGCCGTTGATTCTCTTCTGCTTCTTGCTTGGTTTTGGCTGTTACTTTCTAGGCAGAGCTAAAGGGAGACAGGACATTCGGACTAA
TGCCCAGGTCTTTGGGGTGCCGGCGCCACCTCCCGGTAGCGGTCTCGCCCATCCTCCGCCACCGCCGGAGCCGCTTTTCAAACCTGATAATTCAGCCCATGATGAACTTC
AATACTCCATGAATCGTTTTGCTGTTATTGTGGCTGTTCTATGGGTGTTTCTGCATTCAATCGAGTGA
Protein sequenceShow/hide protein sequence
MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPEPLFKPDNSAHDELQYSMNRFAVIVAVLWVFLHSIE