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Carg25691 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25691
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor PAR2
Genome locationCarg_Chr04:1537281..1537556
RNA-Seq ExpressionCarg25691
SyntenyCarg25691
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600126.1 hypothetical protein SDJN03_05359, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3181.32Show/hide
Query:  MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQL       + L   + PL  K+
Subjt:  MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

KAG7030796.1 hypothetical protein SDJN02_04833, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-43100Show/hide
Query:  MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
Subjt:  MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

XP_011655641.1 uncharacterized protein LOC105435564 [Cucumis sativus]9.5e-2476.83Show/hide
Query:  ESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        ESKGIGKV+WQRRGRRG RHG   GG+V  +MR+LQRLIPGGR LK DRL L+TADYIMQLRSQV VLQAL+ IYDP LS Y
Subjt:  ESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

XP_022151226.1 transcription factor PAR2 [Momordica charantia]2.1e-2372.34Show/hide
Query:  MEYCWVWCKESK--GIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDP-LLSKY
        MEY  V   ++K  GIGKVKWQRRGRRG RHG   GG+VQ +MR+LQRLIPGGRGLK DRL L+TADYIMQLRSQV+VLQAL+ IY+P L+SKY
Subjt:  MEYCWVWCKESK--GIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDP-LLSKY

XP_038891463.1 transcription factor PAR2 [Benincasa hispida]1.8e-2276.83Show/hide
Query:  ESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        ESKGIG VKWQRRGRRG     RHG +VQ +MR+LQRLIPGGR LK DRL L+TADYIMQLRSQV VLQAL+ IYDP LSKY
Subjt:  ESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

TrEMBL top hitse value%identityAlignment
A0A0A0KQB4 Uncharacterized protein4.6e-2476.83Show/hide
Query:  ESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        ESKGIGKV+WQRRGRRG RHG   GG+V  +MR+LQRLIPGGR LK DRL L+TADYIMQLRSQV VLQAL+ IYDP LS Y
Subjt:  ESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

A0A1S3BFE3 uncharacterized protein LOC1034890263.6e-2174.39Show/hide
Query:  ESKGIGKVKWQRRGRRGVRH--GIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLS
        ES GIGKV+WQRRGRRG RH  G   GG+V  +MR+LQRLIPGGR LK DRL L+TADYIMQLRSQV VLQAL+ IYDP LS
Subjt:  ESKGIGKVKWQRRGRRGVRH--GIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLS

A0A6J1DDZ5 transcription factor PAR21.0e-2372.34Show/hide
Query:  MEYCWVWCKESK--GIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDP-LLSKY
        MEY  V   ++K  GIGKVKWQRRGRRG RHG   GG+VQ +MR+LQRLIPGGRGLK DRL L+TADYIMQLRSQV+VLQAL+ IY+P L+SKY
Subjt:  MEYCWVWCKESK--GIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDP-LLSKY

A0A6J1GYH6 transcription factor PAR2-like1.6e-2169.05Show/hide
Query:  CKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        C E++GI KVKWQRRGRRG RHG   G +V  ++R+LQR+IPGGR LK DRL L+TADYIMQLRSQV VL AL+ IYDP LS+Y
Subjt:  CKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

A0A6J1IR24 uncharacterized protein LOC1114776742.8e-2171.43Show/hide
Query:  CKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY
        C E+KGI KVKWQRRGRRG  HG     +V  +MR+LQRLIPGGR LK DRL L+TADYIMQLRSQV VLQAL+ IYDP LS+Y
Subjt:  CKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY

SwissProt top hitse value%identityAlignment
Q7XR02 Transcription factor IBH18.7e-0444.44Show/hide
Query:  RMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIY
        R   L+RL+PGG G++   LL +TADY+  LR+QV ++Q L +++
Subjt:  RMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIY

Arabidopsis top hitse value%identityAlignment
AT1G23965.1 unknown protein2.8e-0540.26Show/hide
Query:  KESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGL-KADRLLLQTADYIMQLRSQVDVLQALTNIY
        +ES+   + + Q + + G   G    G++Q +MR+L+ LIPGGR L + D LL +TADYIM L  ++  L+A+++IY
Subjt:  KESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGL-KADRLLLQTADYIMQLRSQVDVLQALTNIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTATTGTTGGGTTTGGTGTAAGGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGGGGAAGGCGCGGCGTCCGGCACGGCATCCGGCACGGCGGCGCTGT
GCAGAGGAGGATGAGGAGGCTGCAGCGCTTGATCCCCGGCGGGCGGGGGCTGAAGGCGGACCGTCTGTTGTTACAAACGGCGGACTATATAATGCAACTGAGGTCTCAAG
TTGATGTTTTGCAAGCACTTACCAACATTTATGACCCTCTACTTTCTAAATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTATTGTTGGGTTTGGTGTAAGGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGGGGAAGGCGCGGCGTCCGGCACGGCATCCGGCACGGCGGCGCTGT
GCAGAGGAGGATGAGGAGGCTGCAGCGCTTGATCCCCGGCGGGCGGGGGCTGAAGGCGGACCGTCTGTTGTTACAAACGGCGGACTATATAATGCAACTGAGGTCTCAAG
TTGATGTTTTGCAAGCACTTACCAACATTTATGACCCTCTACTTTCTAAATATTGA
Protein sequenceShow/hide protein sequence
MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY