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Carg25717 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25717
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhomeobox-leucine zipper protein ATHB-7
Genome locationCarg_Chr14:14771487..14771865
RNA-Seq ExpressionCarg25717
SyntenyCarg25717
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR009057 - Homeobox-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019091.1 Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-48100Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWDFWS
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWDFWS

XP_004133792.1 homeobox-leucine zipper protein ATHB-12 [Cucumis sativus]5.8e-2740.69Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLN +DAEYSPP SMAEAF MRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNL+SEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

XP_022924402.1 homeobox-leucine zipper protein ATHB-7 [Cucurbita moschata]3.0e-3142.86Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

XP_022979311.1 homeobox-leucine zipper protein ATHB-7 [Cucurbita maxima]8.7e-3142.42Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLNDDDAEYSPPESMAEAFGMRKK MNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

XP_023527384.1 homeobox-leucine zipper protein ATHB-12 [Cucurbita pepo subsp. pepo]3.0e-3142.86Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

TrEMBL top hitse value%identityAlignment
A0A0A0L317 Homeobox domain-containing protein2.8e-2740.69Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLN +DAEYSPP SMAEAF MRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNL+SEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

A0A1S3AUY7 homeobox-leucine zipper protein ATHB-71.6e-2540.44Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ---------------------------------
        MLN +DAEYSP  SMAEAF MRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ                                 
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ---------------------------------

Query:  ---------------------------------------------------------------------------------------------GSLISTP
                                                                                                      SLISTP
Subjt:  ---------------------------------------------------------------------------------------------GSLISTP

Query:  NWSNLESEGLFSQSNTNGQWWDFWS
        NWSNL+SEGLFSQSNTNGQWW+FWS
Subjt:  NWSNLESEGLFSQSNTNGQWWDFWS

A0A5A7U0W8 Homeobox-leucine zipper protein ATHB-71.6e-2540.44Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ---------------------------------
        MLN +DAEYSP  SMAEAF MRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ                                 
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ---------------------------------

Query:  ---------------------------------------------------------------------------------------------GSLISTP
                                                                                                      SLISTP
Subjt:  ---------------------------------------------------------------------------------------------GSLISTP

Query:  NWSNLESEGLFSQSNTNGQWWDFWS
        NWSNL+SEGLFSQSNTNGQWW+FWS
Subjt:  NWSNLESEGLFSQSNTNGQWWDFWS

A0A6J1E8U3 homeobox-leucine zipper protein ATHB-71.4e-3142.86Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

A0A6J1IQF4 homeobox-leucine zipper protein ATHB-74.2e-3142.42Show/hide
Query:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------
        MLNDDDAEYSPPESMAEAFGMRKK MNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR                                  
Subjt:  MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPR----------------------------------

Query:  --------------------------------------------------------------------------------------------------QG
                                                                                                          QG
Subjt:  --------------------------------------------------------------------------------------------------QG

Query:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
        SLISTPNWSNLESEGLFSQSNTNGQWWDFWS
Subjt:  SLISTPNWSNLESEGLFSQSNTNGQWWDFWS

SwissProt top hitse value%identityAlignment
P46897 Homeobox-leucine zipper protein ATHB-79.4e-1247.47Show/hide
Query:  DDAEYSPPESMAEAFGMRKK-------SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWD
        +  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+QLA ELGL PRQ ++      +  +S+ L ++ N   Q +D
Subjt:  DDAEYSPPESMAEAFGMRKK-------SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWD

Q01IK0 Homeobox-leucine zipper protein HOX221.7e-0554.72Show/hide
Query:  AEAFGMRKKSMNRRRFSEEQIKSLESIFES-ESRLEPRKKLQLAGELGLHPRQ
        A A G       +RRF+EEQI+SLES+F +  ++LEPR+K +LA ELGL PRQ
Subjt:  AEAFGMRKKSMNRRRFSEEQIKSLESIFES-ESRLEPRKKLQLAGELGLHPRQ

Q651Z5 Homeobox-leucine zipper protein HOX62.2e-0872.5Show/hide
Query:  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ
        ++RFSEEQIKSLES+F ++++LEPR+KLQLA ELGL PRQ
Subjt:  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ

Q9M276 Homeobox-leucine zipper protein ATHB-122.1e-1157.35Show/hide
Query:  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNT
        KKS N++RFSEEQIKSLE IFESE+RLEPRKK+Q+A ELGL PRQ ++      +  +++ L  + NT
Subjt:  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNT

Q9XH35 Homeobox-leucine zipper protein HOX62.2e-0872.5Show/hide
Query:  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ
        ++RFSEEQIKSLES+F ++++LEPR+KLQLA ELGL PRQ
Subjt:  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ

Arabidopsis top hitse value%identityAlignment
AT2G22430.1 homeobox protein 62.7e-0649.09Show/hide
Query:  ESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ
        E++ E  G    S  +RR S  Q+K+LE  FE E++LEP +K++LA ELGL PRQ
Subjt:  ESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ

AT2G46680.1 homeobox 76.7e-1347.47Show/hide
Query:  DDAEYSPPESMAEAFGMRKK-------SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWD
        +  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+QLA ELGL PRQ ++      +  +S+ L ++ N   Q +D
Subjt:  DDAEYSPPESMAEAFGMRKK-------SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWD

AT2G46680.2 homeobox 76.7e-1347.47Show/hide
Query:  DDAEYSPPESMAEAFGMRKK-------SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWD
        +  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+QLA ELGL PRQ ++      +  +S+ L ++ N   Q +D
Subjt:  DDAEYSPPESMAEAFGMRKK-------SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWD

AT3G61890.1 homeobox 121.5e-1257.35Show/hide
Query:  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNT
        KKS N++RFSEEQIKSLE IFESE+RLEPRKK+Q+A ELGL PRQ ++      +  +++ L  + NT
Subjt:  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNT

AT4G40060.1 homeobox protein 161.3e-0553.49Show/hide
Query:  SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ
        S  +RR   +Q+K+LE  FE E++LEP +K +LA ELGL PRQ
Subjt:  SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAATGATGATGATGCCGAATATTCTCCTCCAGAATCCATGGCAGAGGCTTTTGGCATGAGAAAAAAAAGCATGAACAGAAGAAGGTTCAGTGAAGAGCAGATCAA
ATCATTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTAGCGGGAGAGCTGGGGTTGCATCCACGCCAGGGCTCCTTGATATCAACAC
CAAATTGGAGCAATTTAGAGTCTGAAGGGCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAATGATGATGATGCCGAATATTCTCCTCCAGAATCCATGGCAGAGGCTTTTGGCATGAGAAAAAAAAGCATGAACAGAAGAAGGTTCAGTGAAGAGCAGATCAA
ATCATTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTAGCGGGAGAGCTGGGGTTGCATCCACGCCAGGGCTCCTTGATATCAACAC
CAAATTGGAGCAATTTAGAGTCTGAAGGGCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGA
Protein sequenceShow/hide protein sequence
MLNDDDAEYSPPESMAEAFGMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQGSLISTPNWSNLESEGLFSQSNTNGQWWDFWS