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Carg25718 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25718
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin-responsive family protein
Genome locationCarg_Chr14:14784586..14784897
RNA-Seq ExpressionCarg25718
SyntenyCarg25718
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048857.1 auxin-responsive family protein [Cucumis melo var. makuwa]2.6e-4688.99Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHH------H
        MGGGERRRQ SGA VPKGCLAV+VGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH+H      H
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHH------H

Query:  HVGCFRVSF
        H+GCFRVSF
Subjt:  HVGCFRVSF

XP_022924405.1 auxin-responsive protein SAUR32-like [Cucurbita moschata]1.3e-53100Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFR
        MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFR
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFR

Query:  VSF
        VSF
Subjt:  VSF

XP_022979593.1 auxin-responsive protein SAUR32-like [Cucurbita maxima]1.9e-4995.19Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR-HHHHHVGCF
        M GG+RRR HSGA VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR HHHHHVGCF
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR-HHHHHVGCF

Query:  RVSF
        RVSF
Subjt:  RVSF

XP_023526937.1 auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]3.7e-4892.59Show/hide
Query:  MGGGERRRQHS-GAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR----HHHHH
        M GGERRRQHS  A VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR    HHHHH
Subjt:  MGGGERRRQHS-GAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR----HHHHH

Query:  VGCFRVSF
        VGCFRVSF
Subjt:  VGCFRVSF

XP_038900878.1 auxin-responsive protein SAUR32-like [Benincasa hispida]3.1e-4793.33Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR--HHHHHVGC
        MGGGERRRQ S A VPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR  HHHHH+GC
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR--HHHHHVGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

TrEMBL top hitse value%identityAlignment
A0A0A0L5S7 Uncharacterized protein3.7e-4686.61Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR---------H
        MGGGERRRQ S A VPKGCLAV+VGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR         H
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR---------H

Query:  HHHHVGCFRVSF
        HHHH+GCFRVSF
Subjt:  HHHHVGCFRVSF

A0A5D3DBZ9 Auxin-responsive family protein1.3e-4688.99Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHH------H
        MGGGERRRQ SGA VPKGCLAV+VGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH+H      H
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHH------H

Query:  HVGCFRVSF
        H+GCFRVSF
Subjt:  HVGCFRVSF

A0A6J1EEX5 auxin-responsive protein SAUR32-like6.3e-54100Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFR
        MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFR
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFR

Query:  VSF
        VSF
Subjt:  VSF

A0A6J1ICI8 auxin-responsive protein SAUR32-like1.1e-4284.91Show/hide
Query:  MGGGER--RRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHH-HHHVG
        MGGGER   RQ S   VP+GCLAV+VGQ+ E+QQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVEEFRHVQ MIDRENSFHRRHH HHH+G
Subjt:  MGGGER--RRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHH-HHHVG

Query:  CFRVSF
        CFRVSF
Subjt:  CFRVSF

A0A6J1IWQ0 auxin-responsive protein SAUR32-like9.4e-5095.19Show/hide
Query:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR-HHHHHVGCF
        M GG+RRR HSGA VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR HHHHHVGCF
Subjt:  MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR-HHHHHVGCF

Query:  RVSF
        RVSF
Subjt:  RVSF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR361.0e-1352.24Show/hide
Query:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMI
        VP+G LA+ VGQK+ +  R +VP++YFNHP F +LL+EAE+EYGF  +G I IPC   +F  V+  I
Subjt:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMI

P33079 Auxin-induced protein 10A59.2e-1051.56Show/hide
Query:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV
        VPKG  AV VG K    +RF +PV Y N P F +LL +AEEE+G+D   G + IPC  EEF +V
Subjt:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV

P33082 Auxin-induced protein X155.4e-1045.83Show/hide
Query:  RRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV
        R+  +    PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G + IPC  E F+ +
Subjt:  RRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV

Q41220 Auxin-responsive protein SAUR156.3e-1140Show/hide
Query:  GGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMI
        G ++  +   +  P+G +AV VG+ +++++R+VVPV Y N P F QLL ++EEE+G+D   G + IPCH   F  V   I
Subjt:  GGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMI

Q9ZUZ3 Auxin-responsive protein SAUR325.0e-3269.07Show/hide
Query:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRE------NSFHRRH-----HHHHVGCFR
        VPKGCLA++VG + EEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E      N+ H RH     +HH VGCFR
Subjt:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRE------NSFHRRH-----HHHHVGCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family3.5e-3369.07Show/hide
Query:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRE------NSFHRRH-----HHHHVGCFR
        VPKGCLA++VG + EEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E      N+ H RH     +HH VGCFR
Subjt:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRE------NSFHRRH-----HHHHVGCFR

AT3G60690.1 SAUR-like auxin-responsive protein family4.7e-1752.05Show/hide
Query:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSF
        VPKG  AV +G+K+ + QR +VP++YFNHP F +LL+EAEEE+GF Q+G I IPC   +F+ VQ  I+  + F
Subjt:  VPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSF

AT3G61900.1 SAUR-like auxin-responsive protein family2.2e-3075.64Show/hide
Query:  QHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS
        +H    VPKGCLA++VG KEEE+QRFVVPV YFNHP FMQLL+EAEEEYGF+QKGTI IPCHVE FR+VQ MI+RE S
Subjt:  QHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS

AT4G00880.1 SAUR-like auxin-responsive protein family1.0e-3266.67Show/hide
Query:  QHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS---------FHRRHHHHHVGCF
        +H    VPKGCLAV+VGQ  EEQ+RFV+PVMYFNHP F QLLKEAEEE+GF QKGTI IPCHVEEFR+VQG+IDREN+          H  HH+H + CF
Subjt:  QHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS---------FHRRHHHHHVGCF

Query:  RV
        RV
Subjt:  RV

AT5G53590.1 SAUR-like auxin-responsive protein family4.1e-2148.08Show/hide
Query:  HSGAGVPKGCLAVRVGQKEEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR------------HHHHH
        H    VPKGC+A+ VG +++E+   RFVVP+++ +HP F+ LLKEAE+EYGF   G I IPC V+EF+HVQ +ID E   HRR            HH++H
Subjt:  HSGAGVPKGCLAVRVGQKEEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRR------------HHHHH

Query:  VGCF
        + CF
Subjt:  VGCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGTGGAGAGAGACGACGCCAGCACTCCGGCGCCGGCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGGCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTGCC
GGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAGGAGGCGGAGGAGGAGTACGGATTCGATCAGAAAGGGACCATCGCCATTCCTTGCCACGTCGAGGAGT
TCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGTGGAGAGAGACGACGCCAGCACTCCGGCGCCGGCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGGCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTGCC
GGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAGGAGGCGGAGGAGGAGTACGGATTCGATCAGAAAGGGACCATCGCCATTCCTTGCCACGTCGAGGAGT
TCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA
Protein sequenceShow/hide protein sequence
MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFRVSF