; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25741 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25741
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L35a-1-like
Genome locationCarg_Chr03:1449918..1452152
RNA-Seq ExpressionCarg25741
SyntenyCarg25741
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442180.1 PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo]2.7e-5799.11Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_011653915.1 60S ribosomal protein L35a-1 [Cucumis sativus]1.0e-5698.21Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_022928725.1 60S ribosomal protein L35a-1-like [Cucurbita moschata]1.2e-57100Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_022967923.1 60S ribosomal protein L35a-1-like [Cucurbita maxima]4.7e-5799.11Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_038883794.1 60S ribosomal protein L35a-1-like [Benincasa hispida]1.4e-5697.32Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A1S3B4N4 60S ribosomal protein L35a-1-like1.3e-5799.11Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A5A7TGR3 60S ribosomal protein L35a-1-like1.3e-5799.11Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A6J1EL43 60S ribosomal protein L35a-1-like6.0e-58100Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A6J1HSC2 60S ribosomal protein L35a-1-like2.5e-5696.43Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A6J1HTF7 60S ribosomal protein L35a-1-like2.3e-5799.11Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B1.1e-2754.29Show/hide
Query:  ERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFM
        E  RLYV+G  L Y+RSK    P  SLI+IEGV T +E  +Y GKR+AY+Y+A  +  G+  R +WGKV+R HGNSG+VRA F++NLP K+ G  +R+F+
Subjt:  ERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-43.6e-5283.78Show/hide
Query:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGER+RLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI

Q9C912 60S ribosomal protein L35a-32.5e-5383.93Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-22.8e-5284.68Show/hide
Query:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGER+RLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-12.5e-5383.04Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein1.8e-5483.04Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein2.0e-5384.68Show/hide
Query:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGER+RLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein1.8e-5483.93Show/hide
Query:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein2.6e-5383.78Show/hide
Query:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGER+RLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGTCAGGGAGAAAGAATCAGACTCTACGTCAGAGGAACAGTCCTTGGGTACAAAAGGTCCAAGTCAAACCAGTATCCAAGAACATCACTGATTCAGAT
TGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGGTTGGCATATATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTATCGGTGCATTTGGG
GCAAGGTATCCAGACCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTTAAGTCAAACTTGCCCCCAAAATCCATGGGTGATAAAATTAGGGTATTTATGTACCCCAGC
AACATATGA
mRNA sequenceShow/hide mRNA sequence
AAATCATTTTGACCCTCAAATCCCCGTTATAAAAAGTTCCGTCTTCTTCAAGTGGTCACCTTCTTCTCTGAACCGCAGCTTCATCTTCCTCTCTTCAACCTGCAAATCTA
AGGTGATTATTCCTCAAAGATTTCCATTTTTTTTCTTACCAATAGCATTTACATTTGGTTACCGATCTTAGTTCTTCGCGAGTCTTGAACAAGTCATTTTACAGAATCCT
AACCTGCGGCAGCCATGGTGAAGGGAAGTCAGGGAGAAAGAATCAGACTCTACGTCAGAGGAACAGTCCTTGGGTACAAAAGGTCCAAGTCAAACCAGTATCCAAGAACA
TCACTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGGTTGGCATATATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTA
TCGGTGCATTTGGGGCAAGGTATCCAGACCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTTAAGTCAAACTTGCCCCCAAAATCCATGGGTGATAAAATTAGGGTAT
TTATGTACCCCAGCAACATATGAGTTCCTCAAATCAGCTAGCTAGAGGGGTAAGGTTTCGTTTCTTTCTCGACTTGATGGATCGATAGTTTTCTTTTACTTTACTGGACC
CAATGTTTAGATGATGATGTTTTGATGTGAAACTTGACTAAATTTGGAAGGATCATTATGGAATCATACTTTCAATTTTGACCTAGTTTAATTTAATGTCAA
Protein sequenceShow/hide protein sequence
MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPS
NI