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Carg25773 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25773
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBasic helix-loop-helix transcription factor
Genome locationCarg_Chr08:1740022..1741571
RNA-Seq ExpressionCarg25773
SyntenyCarg25773
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575941.1 Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. sororia]9.5e-3960.33Show/hide
Query:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV
        +AGTDG LA A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFPLGLSLDQ                                V
Subjt:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV

Query:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        YQGQQ+HATMGA P PP MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

KAG6593082.1 Light-inducible protein CPRF2, partial [Cucurbita argyrosperma subsp. sororia]4.9e-5992.91Show/hide
Query:  SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRG
        SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGD AGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQG QVHATMGATPQPPAMRPRVRARRG
Subjt:  SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRG

Query:  QATDPHSSAERVREFSILMDRAAMLDEIVDYVKFLHLQVKV
        QATDPHS+AER       MDRAAMLDEIVDYVKFLHLQVKV
Subjt:  QATDPHSSAERVREFSILMDRAAMLDEIVDYVKFLHLQVKV

KAG7025491.1 Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-67100Show/hide
Query:  SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRG
        SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRG
Subjt:  SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRG

Query:  QATDPHSSAERVREFSILMDRAAMLDEIVDYVKFLHLQVKVN
        QATDPHSSAERVREFSILMDRAAMLDEIVDYVKFLHLQVKVN
Subjt:  QATDPHSSAERVREFSILMDRAAMLDEIVDYVKFLHLQVKVN

XP_022954052.1 transcription factor UNE12 [Cucurbita moschata]3.9e-4060.33Show/hide
Query:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV
        +AGTDG LA A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFPLGLSLDQ                                V
Subjt:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV

Query:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        YQGQQ+HATMGA P PP MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

XP_022991272.1 transcription factor UNE12 [Cucurbita maxima]1.1e-3959.78Show/hide
Query:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV
        +AGTDG L  A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFPLGLSLDQ                                V
Subjt:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV

Query:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        YQGQQ+HATMGA P PP MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

TrEMBL top hitse value%identityAlignment
A0A0A0KAD2 BHLH domain-containing protein6.7e-3858.2Show/hide
Query:  VAGTDGDLARAVAAAAS-----AAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA---------------------------
        +AGTDG LA A AAAA+     AAQGQAP MLQLSSGDG G ITTI  GSGS+GG  FHGG PFPLGLSLDQ                            
Subjt:  VAGTDGDLARAVAAAAS-----AAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA---------------------------

Query:  ---IVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
            V+QGQQ+HA MGA P PPAMRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  ---IVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

A0A1S3BR51 transcription factor UNE126.0e-3959.68Show/hide
Query:  VAGTDGDL--ARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------
        +AGTDG L  A A AAAA+AAQGQAP MLQLSSGDG G ITTI  GSGS+GG  FHGG PFPLGLSLDQ                               
Subjt:  VAGTDGDL--ARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------

Query:  IVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
         V+QGQQ+HATMGA P PPAMRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  IVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

A0A5A7V1G8 Transcription factor UNE126.0e-3959.68Show/hide
Query:  VAGTDGDL--ARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------
        +AGTDG L  A A AAAA+AAQGQAP MLQLSSGDG G ITTI  GSGS+GG  FHGG PFPLGLSLDQ                               
Subjt:  VAGTDGDL--ARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------

Query:  IVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
         V+QGQQ+HATMGA P PPAMRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  IVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

A0A6J1GPY3 transcription factor UNE121.9e-4060.33Show/hide
Query:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV
        +AGTDG LA A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFPLGLSLDQ                                V
Subjt:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV

Query:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        YQGQQ+HATMGA P PP MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

A0A6J1JLC3 transcription factor UNE125.5e-4059.78Show/hide
Query:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV
        +AGTDG L  A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFPLGLSLDQ                                V
Subjt:  VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------------------------IV

Query:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        YQGQQ+HATMGA P PP MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL LQVKV
Subjt:  YQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

SwissProt top hitse value%identityAlignment
O22768 Transcription factor UNE125.3e-1642.77Show/hide
Query:  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPA
        G  P MLQL SG+    +  +G GSG  G   FH    FPLGLSLDQ                                 V+ GQ +     + P QP +
Subjt:  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPA

Query:  MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        +RPRVRARRGQATDPHS AER+R   I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

Q8S3D5 Transcription factor LRL28.7e-1141.73Show/hide
Query:  DGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQ-----QVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL-----------
        D    IT I         A F+G +   L   L Q    Q Q        AT G     P  +P+VRARRGQATDPHS AER+R   I            
Subjt:  DGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQ-----QVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL-----------

Query:  ----MDRAAMLDEIVDYVKFLHLQVKV
             D+A+MLDEI+DYVKFL LQVKV
Subjt:  ----MDRAAMLDEIVDYVKFLHLQVKV

Q93Y00 Transcription factor bHLH73.8e-1441.82Show/hide
Query:  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQA----------------------------IVYQGQQVHATMGATP-QPPAM
        G  P MLQL SG+  G+   +G+  G G +G   FH    FPLGLSLDQ                              ++ GQ +       P Q   +
Subjt:  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQA----------------------------IVYQGQQVHATMGATP-QPPAM

Query:  RPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        RPRVRARRGQATDPHS AER+R   I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  RPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

Q9LSQ3 Transcription factor LRL35.7e-1048.81Show/hide
Query:  QGQQVHATMGATPQPPA-MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        +G Q   T+  T  P    +PRVRARRGQATDPHS AER+R   I                 D+A+MLDEI++YV+FL LQVKV
Subjt:  QGQQVHATMGATPQPPA-MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

Q9ZUG9 Transcription factor LRL15.1e-1153.25Show/hide
Query:  ATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        AT G    PP  R ++RARRGQATDPHS AER+R   I                 D+A+MLDEI+DYVKFL LQVKV
Subjt:  ATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

Arabidopsis top hitse value%identityAlignment
AT1G03040.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.7e-1541.82Show/hide
Query:  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQA----------------------------IVYQGQQVHATMGATP-QPPAM
        G  P MLQL SG+  G+   +G+  G G +G   FH    FPLGLSLDQ                              ++ GQ +       P Q   +
Subjt:  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQA----------------------------IVYQGQQVHATMGATP-QPPAM

Query:  RPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        RPRVRARRGQATDPHS AER+R   I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  RPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

AT1G03040.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.8e-1542.5Show/hide
Query:  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQAIVY---------------------QGQQVHATMGATPQP---PAMRPRVR
        G  P MLQL SG+  G+   +G+  G G +G   FH    FPLGLSLDQ   +                        +   +  A P P     +RPRVR
Subjt:  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQAIVY---------------------QGQQVHATMGATPQP---PAMRPRVR

Query:  ARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        ARRGQATDPHS AER+R   I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  ARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

AT4G02590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-1742.77Show/hide
Query:  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPA
        G  P MLQL SG+    +  +G GSG  G   FH    FPLGLSLDQ                                 V+ GQ +     + P QP +
Subjt:  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPA

Query:  MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        +RPRVRARRGQATDPHS AER+R   I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

AT4G02590.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-1742.77Show/hide
Query:  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPA
        G  P MLQL SG+    +  +G GSG  G   FH    FPLGLSLDQ                                 V+ GQ +     + P QP +
Subjt:  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPA

Query:  MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
        +RPRVRARRGQATDPHS AER+R   I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV

AT4G02590.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.8e-1542.66Show/hide
Query:  GSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAERVR
        G G  G   FH    FPLGLSLDQ                                 V+ GQ +     + P QP ++RPRVRARRGQATDPHS AER+R
Subjt:  GSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAERVR

Query:  EFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV
           I                 DRAAM+DEIVDYVKFL LQVKV
Subjt:  EFSIL---------------MDRAAMLDEIVDYVKFLHLQVKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAAGGTAGCTGGAACTGACGGGGACTTGGCCAGAGCTGTTGCTGCTGCGGCGTCGGCGGCTCAAGGTCAAGCTCCGACGATGCTTCAACTTAGTTCCGGCGACGGCGC
TGGCGACATCACTACGATTGGAAGTGGAAGTGGAAGTATTGGTGGAGCAAGGTTTCATGGCGGAACCCCTTTTCCTTTAGGATTGAGCTTGGACCAAGCTATTGTTTATC
AAGGCCAACAAGTGCATGCTACTATGGGTGCAACTCCGCAGCCACCAGCCATGCGCCCTAGGGTACGGGCCAGACGAGGGCAGGCGACTGATCCACATAGCTCTGCCGAG
CGGGTAAGAGAGTTCTCCATTTTGATGGATAGAGCTGCCATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACATCTCCAAGTAAAGGTGAATTGA
mRNA sequenceShow/hide mRNA sequence
AGCAAGGTAGCTGGAACTGACGGGGACTTGGCCAGAGCTGTTGCTGCTGCGGCGTCGGCGGCTCAAGGTCAAGCTCCGACGATGCTTCAACTTAGTTCCGGCGACGGCGC
TGGCGACATCACTACGATTGGAAGTGGAAGTGGAAGTATTGGTGGAGCAAGGTTTCATGGCGGAACCCCTTTTCCTTTAGGATTGAGCTTGGACCAAGCTATTGTTTATC
AAGGCCAACAAGTGCATGCTACTATGGGTGCAACTCCGCAGCCACCAGCCATGCGCCCTAGGGTACGGGCCAGACGAGGGCAGGCGACTGATCCACATAGCTCTGCCGAG
CGGGTAAGAGAGTTCTCCATTTTGATGGATAGAGCTGCCATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACATCTCCAAGTAAAGGTGAATTGA
Protein sequenceShow/hide protein sequence
SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAE
RVREFSILMDRAAMLDEIVDYVKFLHLQVKVN