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Carg25780 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25780
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:1788061..1790345
RNA-Seq ExpressionCarg25780
SyntenyCarg25780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593090.1 WD repeat-containing protein 55, partial [Cucurbita argyrosperma subsp. sororia]4.2e-3193.42Show/hide
Query:  RATQTLSSSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQGL
        +ATQT  SSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQ +
Subjt:  RATQTLSSSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQGL
KAG7025498.1 hypothetical protein SDJN02_11993, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-74100Show/hide
Query:  MSGSKRATQTLSSSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQGLALTHAKLALYFRCPLPKGS
        MSGSKRATQTLSSSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQGLALTHAKLALYFRCPLPKGS
Subjt:  MSGSKRATQTLSSSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQGLALTHAKLALYFRCPLPKGS

Query:  NSGGFGYFEHQLVRLRGHLVVAILGDDDYYELGDAEEET
        NSGGFGYFEHQLVRLRGHLVVAILGDDDYYELGDAEEET
Subjt:  NSGGFGYFEHQLVRLRGHLVVAILGDDDYYELGDAEEET
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCTCGAAGAGAGCCACCCAGACCCTTTCTTCTTCGTCTTCTCCGGGGACTTGCTTCTTTGGCGAACAGCGATTCGGCGCCGCAGCGAGTAACCCACGAACTCC
TCGCCCACACCACTACGAACCCGGGACGGCAGTGGGGCAAACCTCACGATTGAGTTGTGACGGCGCGAGCTCCTTCTTCTTTGTTGAAGCTCAGCACGAGCAGCCTCCAA
TTTCTCTCATTCGGCAAGGTTTGGCACTGACTCACGCTAAATTGGCCTTATATTTTCGTTGCCCATTACCTAAGGGCTCAAATTCTGGAGGTTTTGGCTATTTCGAACAC
CAACTAGTTAGGCTTCGGGGCCATTTAGTGGTGGCGATCCTGGGTGATGATGACTATTATGAACTTGGTGATGCTGAAGAGGAGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGCTCGAAGAGAGCCACCCAGACCCTTTCTTCTTCGTCTTCTCCGGGGACTTGCTTCTTTGGCGAACAGCGATTCGGCGCCGCAGCGAGTAACCCACGAACTCC
TCGCCCACACCACTACGAACCCGGGACGGCAGTGGGGCAAACCTCACGATTGAGTTGTGACGGCGCGAGCTCCTTCTTCTTTGTTGAAGCTCAGCACGAGCAGCCTCCAA
TTTCTCTCATTCGGCAAGGTTTGGCACTGACTCACGCTAAATTGGCCTTATATTTTCGTTGCCCATTACCTAAGGGCTCAAATTCTGGAGGTTTTGGCTATTTCGAACAC
CAACTAGTTAGGCTTCGGGGCCATTTAGTGGTGGCGATCCTGGGTGATGATGACTATTATGAACTTGGTGATGCTGAAGAGGAGACATGA
Protein sequenceShow/hide protein sequence
MSGSKRATQTLSSSSSPGTCFFGEQRFGAAASNPRTPRPHHYEPGTAVGQTSRLSCDGASSFFFVEAQHEQPPISLIRQGLALTHAKLALYFRCPLPKGSNSGGFGYFEH
QLVRLRGHLVVAILGDDDYYELGDAEEET