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Carg25798 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25798
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioninteractor of constitutive active ROPs 2, chloroplastic-like
Genome locationCarg_Chr07:5113517..5115498
RNA-Seq ExpressionCarg25798
SyntenyCarg25798
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595266.1 Interactor of constitutive active ROPs 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3268.91Show/hide
Query:  MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHG----------------------------------SLEAPLRKPRPARQVKALGSDSVSDAS
        MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHG                                  SLEAPLRKPRPARQVKALGSDSVSDAS
Subjt:  MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHG----------------------------------SLEAPLRKPRPARQVKALGSDSVSDAS

Query:  APFSLSKMTKERNPRTALI
        APFSLSKMTKERNPRT ++
Subjt:  APFSLSKMTKERNPRTALI

KAG7027277.1 hypothetical protein SDJN02_11289, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-41100Show/hide
Query:  MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHGSLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALITNSL
        MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHGSLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALITNSL
Subjt:  MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHGSLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALITNSL

XP_022962926.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita moschata]5.6e-1391.3Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI
        SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNP+T ++
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI

XP_022972752.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita maxima]5.3e-1184.78Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI
        SLEAPLRKPRPA QVKALGSDSVS ASAPFS+SKMTKERNP+T ++
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI

XP_023517254.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita pepo subsp. pepo]7.4e-1391.3Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI
        SLE PLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRT ++
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI

TrEMBL top hitse value%identityAlignment
A0A1S3BLP1 interactor of constitutive active ROPs 2, chloroplastic1.6e-0567.44Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRT
        SLEAPLRKPRP RQ+K+ G+DSVS + +P   SKMTKER+P+T
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRT

A0A5A7TWE3 Interactor of constitutive active ROPs 21.6e-0567.44Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRT
        SLEAPLRKPRP RQ+K+ G+DSVS + +P   SKMTKER+P+T
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRT

A0A6J1HIG4 interactor of constitutive active ROPs 2, chloroplastic-like2.7e-1391.3Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI
        SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNP+T ++
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI

A0A6J1I6U7 interactor of constitutive active ROPs 2, chloroplastic-like2.6e-1184.78Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI
        SLEAPLRKPRPA QVKALGSDSVS ASAPFS+SKMTKERNP+T ++
Subjt:  SLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALI

A0A6J1IL28 interactor of constitutive active ROPs 2, chloroplastic-like2.7e-0566.67Show/hide
Query:  SLEAPLRKPRPARQVKALGSDSVS-DASA---PFSLSKMTKERNPRTALITNSL
        +LEAPLRKPRP RQ+KALGSDSVS  ASA   P   SKMTKER+PR  ++T S+
Subjt:  SLEAPLRKPRPARQVKALGSDSVS-DASA---PFSLSKMTKERNPRTALITNSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCTTGAACGGAAATCCGGCATTTCCTTCTGCACAGAATGGCCATGGCTATGGCTATGGCTATGGCAGTGGTCCTCCTGCTCTGTTCATGGAGAAGGTTAACAA
TCACGGAAGTTTGGAAGCACCACTAAGGAAACCTCGACCCGCTCGACAAGTTAAAGCTCTTGGTTCGGATTCTGTTTCGGATGCCTCGGCTCCATTTTCTTTGAGTAAGA
TGACAAAGGAAAGAAATCCTAGGACTGCTTTGATAACAAATTCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCTTGAACGGAAATCCGGCATTTCCTTCTGCACAGAATGGCCATGGCTATGGCTATGGCTATGGCAGTGGTCCTCCTGCTCTGTTCATGGAGAAGGTTAACAA
TCACGGAAGTTTGGAAGCACCACTAAGGAAACCTCGACCCGCTCGACAAGTTAAAGCTCTTGGTTCGGATTCTGTTTCGGATGCCTCGGCTCCATTTTCTTTGAGTAAGA
TGACAAAGGAAAGAAATCCTAGGACTGCTTTGATAACAAATTCACTGTAA
Protein sequenceShow/hide protein sequence
MSSLNGNPAFPSAQNGHGYGYGYGSGPPALFMEKVNNHGSLEAPLRKPRPARQVKALGSDSVSDASAPFSLSKMTKERNPRTALITNSL