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Carg25813 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25813
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationCarg_Chr05:6032145..6032579
RNA-Seq ExpressionCarg25813
SyntenyCarg25813
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598984.1 E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-79100Show/hide
Query:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
        MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
Subjt:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI

Query:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
Subjt:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

XP_022946696.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]7.6e-7695.83Show/hide
Query:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
        MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEG+PSASKASIQALPTVQLKAEE+PCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
Subjt:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI

Query:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        HGTCPVCRYKMPVDEK+N GGVEARRAREIWVAFSFNND R EG
Subjt:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

XP_022972862.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima]6.4e-7593.06Show/hide
Query:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
        MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEG+PSASKASIQALPTVQ+KAEE+PCECP+CLNEWE+GCLAKELPCTHKFHR+CIQKWLGI
Subjt:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI

Query:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        HGTCPVCRYKMPVDE++ND GVEARRAREIWVAFSFNNDRR EG
Subjt:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

XP_023523370.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita pepo subsp. pepo]1.5e-5269.66Show/hide
Query:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIH
        +N N S+RI +VN  TQSM+VIEGRS LEAL+RDLGGK+G P AS+ASI+ALPTVQ+ AEE+ CEC ICL+EWE+G +AKELPC HKFH DCI+KWLG+H
Subjt:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIH

Query:  GTCPVCRYKMP--VDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        G CP+CR K+P  VD K+N+G    RRAREIWV FSFNNDRR+EG
Subjt:  GTCPVCRYKMP--VDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

XP_023546717.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]2.1e-7393.06Show/hide
Query:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
        MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEG+PSASKASIQALPTVQ+KAEE+PCECPICLNEWEMGCLA +LPCTHKFHRDCIQKWLGI
Subjt:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI

Query:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        HGTCPVCRYKMPVDEK+N  GVEARRAREIWVAFSFNND R EG
Subjt:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

TrEMBL top hitse value%identityAlignment
A0A6J1DR69 E3 ubiquitin-protein ligase RNF1812.8e-4465.71Show/hide
Query:  SERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPV
        SER  +VN  TQSM+VIEG S LE+LLRDLG K+G P ASKASI+ALP VQL  E    EC ICL+EWE+G  AKELPC HKFH +CI+KWLGIHG+CP+
Subjt:  SERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPV

Query:  CRYKMPVDE---KDNDGGVEARRAREIWVAFSFNNDRRAE
        CR+KMPVD+   K ND     RR REIWV FSFNND R++
Subjt:  CRYKMPVDE---KDNDGGVEARRAREIWVAFSFNNDRRAE

A0A6J1G4D3 E3 ubiquitin-protein ligase RING1-like3.7e-7695.83Show/hide
Query:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
        MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEG+PSASKASIQALPTVQLKAEE+PCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
Subjt:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI

Query:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        HGTCPVCRYKMPVDEK+N GGVEARRAREIWVAFSFNND R EG
Subjt:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

A0A6J1GCB1 E3 ubiquitin-protein ligase RNF181-like3.7e-5269.66Show/hide
Query:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIH
        +N N S+RI +VN  TQSM+VIEGRS LEAL+RDLGGK+G P AS+ASI+ALPTVQ+ AEE  CEC ICL+EW++G +AKELPC HKFH DCI+KWLGIH
Subjt:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIH

Query:  GTCPVCRYKMP--VDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        G CP+CR K+P  VD K+N+G    RRAREIWV FSFNNDRR+EG
Subjt:  GTCPVCRYKMP--VDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

A0A6J1I5Z1 E3 ubiquitin-protein ligase RING1-like3.1e-7593.06Show/hide
Query:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI
        MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEG+PSASKASIQALPTVQ+KAEE+PCECP+CLNEWE+GCLAKELPCTHKFHR+CIQKWLGI
Subjt:  MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGI

Query:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        HGTCPVCRYKMPVDE++ND GVEARRAREIWVAFSFNNDRR EG
Subjt:  HGTCPVCRYKMPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

A0A6J1K8F1 E3 ubiquitin-protein ligase RNF181-like7.4e-5369.66Show/hide
Query:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIH
        +N N S+RI +VN  TQSM+VIEGRS LEAL+RDLGGK+G P AS+ASI+ALPTVQ+ AEE+ CEC ICL+EWE+G +AKELPC HKFH DCI+KWLG+H
Subjt:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIH

Query:  GTCPVCRYKMP--VDEKDNDGGVEARRAREIWVAFSFNNDRRAEG
        G CP+CR K+P  VD K+N+G    RRAREIWV FSFNNDRR+EG
Subjt:  GTCPVCRYKMP--VDEKDNDGGVEARRAREIWVAFSFNNDRRAEG

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING11.7e-1739.58Show/hide
Query:  LEALLRDLG----GKEGYPSASKASIQALPTVQLKAEEVPCE---CPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKD
        LE L++ L      + G P ASK++I+ALP V +    +  E   C +C++++E G  AK++PC H +H+DC+  WL +H +CPVCR+++P D+ D
Subjt:  LEALLRDLG----GKEGYPSASKASIQALPTVQLKAEEVPCE---CPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKD

Q6AVN2 E3 ubiquitin-protein ligase SIRP11.7e-1745.98Show/hide
Query:  LEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDE
        L+ L      + G P A K +++ALPTV  K EEV   C +CL++ E+G  AK++PC HKFH  CI  WL +H +CPVCR+++P +E
Subjt:  LEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDE

Q8LPN7 E3 ubiquitin-protein ligase RING1-like4.4e-1841.67Show/hide
Query:  LEALLRDLG----GKEGYPSASKASIQALPTVQLKAEEVPCE---CPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKD
        LE L++ L      + G P ASK++I ALPTV++  + +  E   C +C++E+E G   K++PC H FH+DC+  WL +H +CPVCR+++P D+ D
Subjt:  LEALLRDLG----GKEGYPSASKASIQALPTVQLKAEEVPCE---CPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKD

Q9LQX2 E3 ubiquitin-protein ligase MPSR11.3e-3353.9Show/hide
Query:  ERILVVNLVTQSMIVIEGRSRLEALLRDL--GGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCP
        ERI++VN  TQ MIV+EG S +  LLR L    +EG P ASKASI A+P V++   E   EC ICL EW+     KE+PC H+FH  CI+KWLG HG+CP
Subjt:  ERILVVNLVTQSMIVIEGRSRLEALLRDL--GGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCP

Query:  VCRYKMPVD-----EKDNDGGVEARRAREIWVAFSFNNDRR
        VCRY+MPVD     +K NDG        EIWV FSFN+ RR
Subjt:  VCRYKMPVD-----EKDNDGGVEARRAREIWVAFSFNNDRR

Q9SNB6 E3 ubiquitin-protein ligase RDUF19.2e-1636.61Show/hide
Query:  VIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCE--CPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDND
        ++E  S++EA    + G+ G P ASK++I++LP V++       E  C +C   +E G   +E+PC H FH DCI  WL I  +CPVCR+++P D     
Subjt:  VIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCE--CPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDND

Query:  GGVEARRAREIW
           E      IW
Subjt:  GGVEARRAREIW

Arabidopsis top hitse value%identityAlignment
AT1G14200.1 RING/U-box superfamily protein1.4e-2443.55Show/hide
Query:  IVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQL--KAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDN
        ++I  RS L+    D GGK+G   A K+ ++ +P V +    E+    C ICL+EW  G +A E+PC HKFH  C+++WLG H TCP+CRY+MPV+E   
Subjt:  IVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQL--KAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDN

Query:  DGGVEARRAREIWVAFSFN-NDRR
           VE  +   IW+ FS N  DRR
Subjt:  DGGVEARRAREIWVAFSFN-NDRR

AT1G26800.1 RING/U-box superfamily protein9.0e-3553.9Show/hide
Query:  ERILVVNLVTQSMIVIEGRSRLEALLRDL--GGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCP
        ERI++VN  TQ MIV+EG S +  LLR L    +EG P ASKASI A+P V++   E   EC ICL EW+     KE+PC H+FH  CI+KWLG HG+CP
Subjt:  ERILVVNLVTQSMIVIEGRSRLEALLRDL--GGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCP

Query:  VCRYKMPVD-----EKDNDGGVEARRAREIWVAFSFNNDRR
        VCRY+MPVD     +K NDG        EIWV FSFN+ RR
Subjt:  VCRYKMPVD-----EKDNDGGVEARRAREIWVAFSFNNDRR

AT1G55530.1 RING/U-box superfamily protein3.7e-2043.96Show/hide
Query:  LEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDND
        L+ L  +   + G P A K +++AL TV++   E   +C +CL+++E+G  AK +PCTHKFH DC+  WL +H +CPVCRY++P DE   D
Subjt:  LEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDND

AT3G13430.1 RING/U-box superfamily protein1.8e-1945.78Show/hide
Query:  DLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKD
        DL  + G P A+K +++AL  V  K E+   +C +CL+++E+G  AKE+PC HKFH DC+  WL +H +CPVCRY +P  + D
Subjt:  DLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKD

AT5G56340.1 RING/U-box superfamily protein5.7e-2133.33Show/hide
Query:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLG--------------------GKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAK
        +N    +R++++N   QS++V   +++    L  LG                     ++G P A K +++ALPTV++     P +C +CL+++E G  AK
Subjt:  ENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLG--------------------GKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAK

Query:  ELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDND
        E+PC HKFH  CI  WL +H +CPVCR+++P    D+D
Subjt:  ELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKDND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACGAAAATGGAAGCGAGAGGATATTGGTGGTGAACCTTGTTACACAGAGTATGATTGTGATCGAGGGACGTTCGAGGTTGGAAGCGCTATTGCGCGATTTGGG
TGGGAAGGAGGGCTACCCATCGGCCTCGAAGGCGTCCATACAAGCGCTTCCCACCGTTCAGCTCAAGGCAGAGGAGGTGCCTTGCGAGTGCCCCATCTGTTTGAACGAGT
GGGAGATGGGTTGTTTAGCCAAGGAGCTGCCTTGCACACACAAATTCCATCGCGATTGTATACAGAAATGGCTTGGCATCCATGGGACATGTCCGGTTTGTCGGTACAAG
ATGCCTGTTGATGAGAAGGATAACGACGGCGGAGTGGAGGCAAGGAGGGCGAGGGAGATTTGGGTTGCCTTTTCTTTCAATAACGATAGGAGAGCTGAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACGAAAATGGAAGCGAGAGGATATTGGTGGTGAACCTTGTTACACAGAGTATGATTGTGATCGAGGGACGTTCGAGGTTGGAAGCGCTATTGCGCGATTTGGG
TGGGAAGGAGGGCTACCCATCGGCCTCGAAGGCGTCCATACAAGCGCTTCCCACCGTTCAGCTCAAGGCAGAGGAGGTGCCTTGCGAGTGCCCCATCTGTTTGAACGAGT
GGGAGATGGGTTGTTTAGCCAAGGAGCTGCCTTGCACACACAAATTCCATCGCGATTGTATACAGAAATGGCTTGGCATCCATGGGACATGTCCGGTTTGTCGGTACAAG
ATGCCTGTTGATGAGAAGGATAACGACGGCGGAGTGGAGGCAAGGAGGGCGAGGGAGATTTGGGTTGCCTTTTCTTTCAATAACGATAGGAGAGCTGAGGGTTAG
Protein sequenceShow/hide protein sequence
MENENGSERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGYPSASKASIQALPTVQLKAEEVPCECPICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYK
MPVDEKDNDGGVEARRAREIWVAFSFNNDRRAEG