; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25837 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25837
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpolyadenylate-binding protein RBP47-like
Genome locationCarg_Chr12:3080303..3084842
RNA-Seq ExpressionCarg25837
SyntenyCarg25837
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585645.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia]4.8e-66100Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
        MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK

Query:  TIWVGDLQHWMDENYLHSCFASTGE
        TIWVGDLQHWMDENYLHSCFASTGE
Subjt:  TIWVGDLQHWMDENYLHSCFASTGE

KAG6585645.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia]6.3e-02100Show/hide
Query:  GYGSNGSFTHGHQSDGDSTNTT
        GYGSNGSFTHGHQSDGDSTNTT
Subjt:  GYGSNGSFTHGHQSDGDSTNTT

KAG7020557.1 Polyadenylate-binding protein RBP47 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-122100Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
        MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK

Query:  TIWVGDLQHWMDENYLHSCFASTGEYFDMLFFNKVRYGYGSNGSFTHGHQSDGDSTNTTHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS
        TIWVGDLQHWMDENYLHSCFASTGEYFDMLFFNKVRYGYGSNGSFTHGHQSDGDSTNTTHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS
Subjt:  TIWVGDLQHWMDENYLHSCFASTGEYFDMLFFNKVRYGYGSNGSFTHGHQSDGDSTNTTHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS

Query:  YGAYPMYGTHQQQVS
        YGAYPMYGTHQQQVS
Subjt:  YGAYPMYGTHQQQVS

XP_022951380.1 polyadenylate-binding protein RBP47-like [Cucurbita moschata]7.3e-8346.92Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
        MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNG   QQHQQPPHQESTSENK
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK

Query:  TIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN--------------------------------
        TIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                                
Subjt:  TIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN--------------------------------

Query:  -----------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQSD
                               KV Y                                                          GYGSNGSFTHGHQSD
Subjt:  -----------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQSD

Query:  GDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYGG
        GDSTNTT                                                                            HRADYSNQWSGAAYYGG
Subjt:  GDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYGG

Query:  QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
Subjt:  QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

XP_023002570.1 polyadenylate-binding protein RBP47-like [Cucurbita maxima]1.5e-8046.59Show/hide
Query:  MPSNGPDSQS-QQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSEN
        MPSNGPDSQS QQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNG   QQHQQP HQESTSEN
Subjt:  MPSNGPDSQS-QQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSEN

Query:  KTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN-------------------------------
        KTIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                               
Subjt:  KTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN-------------------------------

Query:  ------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQS
                                KV Y                                                          GYGSNGSFTHGHQS
Subjt:  ------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQS

Query:  DGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYG
        DGDSTNTT                                                                            HRADYSNQWSGAAYYG
Subjt:  DGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYG

Query:  GQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        GQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
Subjt:  GQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

XP_023537623.1 polyadenylate-binding protein RBP47-like [Cucurbita pepo subsp. pepo]2.4e-8146.71Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
        MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNG   QQHQQPPHQESTSENK
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK

Query:  TIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN--------------------------------
        TIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                                
Subjt:  TIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN--------------------------------

Query:  -----------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQSD
                               KV Y                                                          GYGSNGSFTHGHQSD
Subjt:  -----------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQSD

Query:  GDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYGG
        GDSTNTT                                                                            HRADYSNQWSGAAYYGG
Subjt:  GDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYGG

Query:  --QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
          QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
Subjt:  --QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

TrEMBL top hitse value%identityAlignment
A0A1S3BBK1 polyadenylate-binding protein RBP47-like4.5e-5439Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGR--PPHQVNGQQHQQHQQPPHQESTSE
        MPSNGPDSQ QQQ+AH TEQNQQ HKQPQ      PQ WMAMQY AA MIM  PMMPPQHY+P  SPH IPY +  PPHQ+NGQQHQQ    PHQ STSE
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGR--PPHQVNGQQHQQHQQPPHQESTSE

Query:  NKTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN------------------------------
        NKTIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                              
Subjt:  NKTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN------------------------------

Query:  -------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQ
                                 KV Y                                                          GY SNGSF+HGHQ
Subjt:  -------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQ

Query:  SDGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYY
        SDGD TNTT                                                                            +RADY N WSG AYY
Subjt:  SDGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYY

Query:  GGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        GGQMYGGYGYA+PLPYDPPTMYAAA YGAYPMYGTHQQQV+
Subjt:  GGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

A0A5A7V0L8 Polyadenylate-binding protein RBP47-like4.5e-5439Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGR--PPHQVNGQQHQQHQQPPHQESTSE
        MPSNGPDSQ QQQ+AH TEQNQQ HKQPQ      PQ WMAMQY AA MIM  PMMPPQHY+P  SPH IPY +  PPHQ+NGQQHQQ    PHQ STSE
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGR--PPHQVNGQQHQQHQQPPHQESTSE

Query:  NKTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN------------------------------
        NKTIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                              
Subjt:  NKTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN------------------------------

Query:  -------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQ
                                 KV Y                                                          GY SNGSF+HGHQ
Subjt:  -------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQ

Query:  SDGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYY
        SDGD TNTT                                                                            +RADY N WSG AYY
Subjt:  SDGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYY

Query:  GGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        GGQMYGGYGYA+PLPYDPPTMYAAA YGAYPMYGTHQQQV+
Subjt:  GGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

A0A6J1CRE8 polyadenylate-binding protein RBP47-like6.3e-5638.78Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGR--PPHQVNGQQHQQHQQPPHQESTSE
        MPSNGPDSQ QQQ AH TEQNQQ +KQPQP PQ  PQ WMAMQY AA MIM  PMMPPQHY+P  SPH +PY +  PPHQ+NGQQH    QPPHQ STSE
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGR--PPHQVNGQQHQQHQQPPHQESTSE

Query:  NKTIWVGDLQHWMDENYLHSCFASTGE-----------------YFDMLFFN------------------------------------------------
        NKTIWVGDL HWMDENYLHSCFASTGE                 Y  + FF+                                                
Subjt:  NKTIWVGDLQHWMDENYLHSCFASTGE-----------------YFDMLFFN------------------------------------------------

Query:  -------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQ
                                 KV Y                                                          GY SNGSFTHGHQ
Subjt:  -------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQ

Query:  SDGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYY
        SDGDSTNTT                                                                            +RADY+N W+G  YY
Subjt:  SDGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYY

Query:  GGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        GGQ+YGGYGYA+PLPYDPPTMYAAA+YGAYPMYGTHQQQV+
Subjt:  GGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

A0A6J1GHF5 polyadenylate-binding protein RBP47-like3.5e-8346.92Show/hide
Query:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK
        MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNG   QQHQQPPHQESTSENK
Subjt:  MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENK

Query:  TIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN--------------------------------
        TIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                                
Subjt:  TIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN--------------------------------

Query:  -----------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQSD
                               KV Y                                                          GYGSNGSFTHGHQSD
Subjt:  -----------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQSD

Query:  GDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYGG
        GDSTNTT                                                                            HRADYSNQWSGAAYYGG
Subjt:  GDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYGG

Query:  QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
Subjt:  QMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

A0A6J1KPB2 polyadenylate-binding protein RBP47-like7.4e-8146.59Show/hide
Query:  MPSNGPDSQS-QQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSEN
        MPSNGPDSQS QQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNG   QQHQQP HQESTSEN
Subjt:  MPSNGPDSQS-QQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSEN

Query:  KTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN-------------------------------
        KTIWVGDLQHWMDENYLHSCFASTGE                                   Y  +L  N                               
Subjt:  KTIWVGDLQHWMDENYLHSCFASTGE-----------------------------------YFDMLFFN-------------------------------

Query:  ------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQS
                                KV Y                                                          GYGSNGSFTHGHQS
Subjt:  ------------------------KVRY----------------------------------------------------------GYGSNGSFTHGHQS

Query:  DGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYG
        DGDSTNTT                                                                            HRADYSNQWSGAAYYG
Subjt:  DGDSTNTT----------------------------------------------------------------------------HRADYSNQWSGAAYYG

Query:  GQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
        GQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS
Subjt:  GQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS

SwissProt top hitse value%identityAlignment
F4I3B3 Polyadenylate-binding protein RBP47A2.8e-0841.74Show/hide
Query:  PHKQPQPHPQPPPQWWMAM-QYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVN-----------GQQHQQHQQPPHQESTSEN-KTIWVGDLQHW
        P +Q Q   Q   QW  AM QY AA M     MM  Q  M    P   PY +  +Q +            QQH Q QQ P   S  ++ KT+WVGDL HW
Subjt:  PHKQPQPHPQPPPQWWMAM-QYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVN-----------GQQHQQHQQPPHQESTSEN-KTIWVGDLQHW

Query:  MDENYLHSCFASTGE
        MDE YLH+CF+ T E
Subjt:  MDENYLHSCFASTGE

Q0WW84 Polyadenylate-binding protein RBP47B1.5e-0942.34Show/hide
Query:  SNGPDSQSQQQSAHHTEQNQQ---PHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHR-IPYGRPPHQVNGQQ------HQQHQQPPH
        +NG DS      A  T  NQQ   P +Q Q   Q   QW  AMQY  A       MM  Q    L  PH+ +PY + P+Q +  Q      +QQHQ   H
Subjt:  SNGPDSQSQQQSAHHTEQNQQ---PHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHR-IPYGRPPHQVNGQQ------HQQHQQPPH

Query:  QE----STSENKTIWVGDLQHWMDENYLHSCFASTGE
        +     S  + KT+WVGDL HWMDE YLHSCF+ TGE
Subjt:  QE----STSENKTIWVGDLQHWMDENYLHSCFASTGE

Q9LEB3 Polyadenylate-binding protein RBP477.5e-1442.18Show/hide
Query:  NGPDSQSQQQSAHHTEQNQQPHKQPQPH---PQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPH--QESTSE
        NG D   QQQ      Q QQ H+Q Q      Q   Q WMAMQY AA M M   MM  Q YMP    H             QQ Q+ QQ P   Q S+ +
Subjt:  NGPDSQSQQQSAHHTEQNQQPHKQPQPH---PQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPH--QESTSE

Query:  NKTIWVGDLQHWMDENYLHSCFASTGEYFDMLFFNKVRYGYGSNGSF
        NKTIW+GDLQ WMDE+YLHSCF+  GE   +      + G      F
Subjt:  NKTIWVGDLQHWMDENYLHSCFASTGEYFDMLFFNKVRYGYGSNGSF

Q9SX79 Polyadenylate-binding protein RBP47C3.1e-0737.12Show/hide
Query:  SQSQQQSAHHTEQNQQP-------------HKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQ
        S+S+   +H    NQ P               QP+  P PPP W   M+Y    +I H  M  P  + P    H+ P +    HQ  G +HQ        
Subjt:  SQSQQQSAHHTEQNQQP-------------HKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQ

Query:  ESTSENKTIWVGDLQHWMDENYLHSCFASTGE
            ENKTIWVGDL HWMDE YL+S FAS  E
Subjt:  ESTSENKTIWVGDLQHWMDENYLHSCFASTGE

Q9SX80 Polyadenylate-binding protein RBP47C'1.2e-0843Show/hide
Query:  QPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQESTSENKTIWVGDLQHWMDENYLHSCFASTGE
        QP+  P PPP  WM    +  P++M   M  P   MP S  H+ P +    HQ  G +HQ            ENKTIWVGDLQ+WMDE YL+S F S  E
Subjt:  QPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQESTSENKTIWVGDLQHWMDENYLHSCFASTGE

Arabidopsis top hitse value%identityAlignment
AT1G47490.1 RNA-binding protein 47C2.2e-0837.12Show/hide
Query:  SQSQQQSAHHTEQNQQP-------------HKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQ
        S+S+   +H    NQ P               QP+  P PPP W   M+Y    +I H  M  P  + P    H+ P +    HQ  G +HQ        
Subjt:  SQSQQQSAHHTEQNQQP-------------HKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQ

Query:  ESTSENKTIWVGDLQHWMDENYLHSCFASTGE
            ENKTIWVGDL HWMDE YL+S FAS  E
Subjt:  ESTSENKTIWVGDLQHWMDENYLHSCFASTGE

AT1G47490.2 RNA-binding protein 47C2.2e-0837.12Show/hide
Query:  SQSQQQSAHHTEQNQQP-------------HKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQ
        S+S+   +H    NQ P               QP+  P PPP W   M+Y    +I H  M  P  + P    H+ P +    HQ  G +HQ        
Subjt:  SQSQQQSAHHTEQNQQP-------------HKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQ

Query:  ESTSENKTIWVGDLQHWMDENYLHSCFASTGE
            ENKTIWVGDL HWMDE YL+S FAS  E
Subjt:  ESTSENKTIWVGDLQHWMDENYLHSCFASTGE

AT1G47500.1 RNA-binding protein 47C'8.8e-1043Show/hide
Query:  QPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQESTSENKTIWVGDLQHWMDENYLHSCFASTGE
        QP+  P PPP  WM    +  P++M   M  P   MP S  H+ P +    HQ  G +HQ            ENKTIWVGDLQ+WMDE YL+S F S  E
Subjt:  QPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIP-YGRPPHQVNGQQHQQHQQPPHQESTSENKTIWVGDLQHWMDENYLHSCFASTGE

AT1G49600.1 RNA-binding protein 47A2.0e-0941.74Show/hide
Query:  PHKQPQPHPQPPPQWWMAM-QYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVN-----------GQQHQQHQQPPHQESTSEN-KTIWVGDLQHW
        P +Q Q   Q   QW  AM QY AA M     MM  Q  M    P   PY +  +Q +            QQH Q QQ P   S  ++ KT+WVGDL HW
Subjt:  PHKQPQPHPQPPPQWWMAM-QYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVN-----------GQQHQQHQQPPHQESTSEN-KTIWVGDLQHW

Query:  MDENYLHSCFASTGE
        MDE YLH+CF+ T E
Subjt:  MDENYLHSCFASTGE

AT3G19130.1 RNA-binding protein 47B1.0e-1042.34Show/hide
Query:  SNGPDSQSQQQSAHHTEQNQQ---PHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHR-IPYGRPPHQVNGQQ------HQQHQQPPH
        +NG DS      A  T  NQQ   P +Q Q   Q   QW  AMQY  A       MM  Q    L  PH+ +PY + P+Q +  Q      +QQHQ   H
Subjt:  SNGPDSQSQQQSAHHTEQNQQ---PHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHR-IPYGRPPHQVNGQQ------HQQHQQPPH

Query:  QE----STSENKTIWVGDLQHWMDENYLHSCFASTGE
        +     S  + KT+WVGDL HWMDE YLHSCF+ TGE
Subjt:  QE----STSENKTIWVGDLQHWMDENYLHSCFASTGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCCAACGGCCCTGATTCGCAGTCGCAGCAGCAGTCTGCACATCATACGGAGCAGAATCAGCAACCGCACAAACAACCGCAACCGCATCCGCAGCCGCCACCGCA
GTGGTGGATGGCGATGCAGTATCAAGCGGCGCCGATGATAATGCATGATCCGATGATGCCGCCGCAGCATTACATGCCTTTATCTTCACCGCACCGTATTCCTTACGGTC
GACCGCCGCATCAGGTTAACGGCCAGCAGCACCAGCAGCACCAGCAGCCGCCGCACCAGGAATCCACCAGCGAGAACAAGACTATTTGGGTCGGCGATTTGCAGCATTGG
ATGGACGAGAATTACCTCCATAGCTGTTTCGCTTCCACCGGCGAGTATTTTGATATGTTATTCTTCAATAAAGTACGATACGGATATGGATCAAATGGCTCATTCACCCA
TGGACACCAGTCTGATGGAGATTCTACAAATACAACTCACCGAGCTGATTATAGTAACCAGTGGAGTGGAGCCGCCTACTATGGAGGGCAGATGTATGGGGGATATGGAT
ACGCAATGCCGTTACCTTATGATCCACCAACCATGTATGCTGCAGCATCATATGGAGCTTACCCTATGTACGGTACCCATCAACAGCAAGTGAGCTGA
mRNA sequenceShow/hide mRNA sequence
TGTGCATTTGTTTTCGGCTGTTCCACCCTAATTGAGCCTTTCTTTCCTTTCTCCTCTCTGGTTTATCTCCTCCGCCTTCAGCTTGCGGTTATCAATCGCCATGGATTTCT
TCTTTCACTAACTTTGATTCACTAGCCTTGTTCTCGTTCATCTTTCTACTCATTCTTCTTCTTCTTCGTCTTGTGAAAATTTTGTTTGCGCTGTTTAATTTTGAGCGGTA
GAGAGAGTGCGAGAAGATGCCATCCAACGGCCCTGATTCGCAGTCGCAGCAGCAGTCTGCACATCATACGGAGCAGAATCAGCAACCGCACAAACAACCGCAACCGCATC
CGCAGCCGCCACCGCAGTGGTGGATGGCGATGCAGTATCAAGCGGCGCCGATGATAATGCATGATCCGATGATGCCGCCGCAGCATTACATGCCTTTATCTTCACCGCAC
CGTATTCCTTACGGTCGACCGCCGCATCAGGTTAACGGCCAGCAGCACCAGCAGCACCAGCAGCCGCCGCACCAGGAATCCACCAGCGAGAACAAGACTATTTGGGTCGG
CGATTTGCAGCATTGGATGGACGAGAATTACCTCCATAGCTGTTTCGCTTCCACCGGCGAGTATTTTGATATGTTATTCTTCAATAAAGTACGATACGGATATGGATCAA
ATGGCTCATTCACCCATGGACACCAGTCTGATGGAGATTCTACAAATACAACTCACCGAGCTGATTATAGTAACCAGTGGAGTGGAGCCGCCTACTATGGAGGGCAGATG
TATGGGGGATATGGATACGCAATGCCGTTACCTTATGATCCACCAACCATGTATGCTGCAGCATCATATGGAGCTTACCCTATGTACGGTACCCATCAACAGCAAGTGAG
CTGATTGGAAGGTAGAGGAAACAATCCTTTGTTCTAATAAAGACAATTGTCCCGTTTGAAGCCTGGGGGTCGGTAAATCTTCTACGTTTCTCTGTAGGATTTCACTATCT
ATAATGGACAAAGTTGCTACATTTCCGAATGTTCCAACTTTGTTCGCGAGGTTTTCTATAAATCCCTCCACCATGGAGCGAAACCGAATTTTGATGGACCGGGTTATGTA
GAATATGATCTACTAACTATTCGTTTGAGACTGCTAGAACTAATAAGGTACTCGAAAATGTTTGTTAGAAAATATAATGTTATGGGCTTGTAGCTTTAGCTAAGATTGTT
CTGCGCTTGCTATTCAGACATTATCACATAGATAAGATTCCGATTGTTGTTGTGTCCTTGTCTCCTTGTCCTGTTCTTTTGCTTTGTTTTGGGAGTACTTTTGAAGTGTG
TGTTTTAAAAGGATATGGCTATTGGCGCCTGCAAGATTTGGGAATGATTATCAATCAAATGGTTTTCAAATGCCTATTTGTTTGTAGTTTCTTTGAGTTGATTTTTATAT
GTTATTCTTGTATGATCAAGTGTTTGATTCTTTTAATGTTACTATATGGATCTATTATTGATGTTTTGTTTTTTTTTTGGTCTAAGTTCTTTCTTTTTCATTAGGAAAAG
TGCTTAATAATTTGCTTATGTTTCTTGTAATTTTTTAGACTAAGCCATTTGAATTATGTAGCAATGTTTAACTAAGATATTCCAATTCAAATGACTTGAGAACTTTGACT
AATTTAGGTGATTTTGATTGAACATAAAAGGTT
Protein sequenceShow/hide protein sequence
MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQHYMPLSSPHRIPYGRPPHQVNGQQHQQHQQPPHQESTSENKTIWVGDLQHW
MDENYLHSCFASTGEYFDMLFFNKVRYGYGSNGSFTHGHQSDGDSTNTTHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAASYGAYPMYGTHQQQVS