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Carg25841 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25841
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMaturase
Genome locationCarg_Chr12:3056046..3056606
RNA-Seq ExpressionCarg25841
SyntenyCarg25841
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAR20299.1 maturase, partial [Cucurbita pepo]2.3e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL +  AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
ADK56485.1 maturase, partial [Cucurbita ficifolia]3.9e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL    AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
ADL63382.1 MatR, partial [Cucurbita pepo]2.3e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL +  AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
KAG7020553.1 hypothetical protein SDJN02_17239, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-75100Show/hide
Query:  MGFRISSKDVSVSLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVCIVIEATGLTQYWPKAHKRPNIGPTTKLSPPDSELNPFSTTDRNEGK
        MGFRISSKDVSVSLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVCIVIEATGLTQYWPKAHKRPNIGPTTKLSPPDSELNPFSTTDRNEGK
Subjt:  MGFRISSKDVSVSLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVCIVIEATGLTQYWPKAHKRPNIGPTTKLSPPDSELNPFSTTDRNEGK

Query:  GEAIELEIPRLSPCFSFIAFAMSSSSSLAHRHNIQPSQIAAQ
        GEAIELEIPRLSPCFSFIAFAMSSSSSLAHRHNIQPSQIAAQ
Subjt:  GEAIELEIPRLSPCFSFIAFAMSSSSSLAHRHNIQPSQIAAQ
YP_003587362.1 maturase [Cucurbita pepo]2.3e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL +  AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
TrEMBL top hitse value%identityAlignment
A0A6J1I4G9 uncharacterized protein LOC1114695631.9e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL    AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
D5I3E8 Maturase1.1e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL +  AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
E2EZQ3 Maturase (Fragment)1.9e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL    AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
E5DKR4 MatR (Fragment)1.1e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL +  AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
Q6SQ32 Maturase (Fragment)1.1e-0867.92Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
        SLVSSWHTP       +GDQKTPFGL +  AAFLNKPSSL+C   +IEATGLT
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVC--IVIEATGLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
ATMG00520.1 Intron maturase, type II family protein3.2e-0857.38Show/hide
Query:  SLVSSWHTPTHQYHPTQGDQKTPFGL--LSIFAAFLNKPSSLVC--IVIEATGLTQYWPKA
        SLVSSWHTP       +GDQK PF     S  A FLNKPSSL+C   +IEA GLT   PKA
Subjt:  SLVSSWHTPTHQYHPTQGDQKTPFGL--LSIFAAFLNKPSSLVC--IVIEATGLTQYWPKA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCAGGATCTCAAGTAAAGACGTTAGCGTATCCCTTGTTTCGTCGTGGCACACCCCCACACACCAGTACCACCCGACTCAAGGGGACCAGAAAACGCCTTTCGG
TTTACTCTCAATCTTTGCCGCCTTCCTTAACAAGCCCTCGAGCCTCGTTTGCATCGTCATAGAAGCGACCGGGTTGACCCAATATTGGCCCAAGGCCCACAAAAGGCCCA
ATATTGGCCCAACAACGAAACTGTCGCCGCCGGATTCCGAACTCAATCCTTTCTCAACGACGGACAGAAATGAAGGCAAAGGAGAAGCCATCGAGCTCGAAATCCCCCGC
CTCTCGCCCTGCTTTTCTTTCATAGCCTTCGCAATGTCGTCGTCTTCTTCCTTAGCGCATCGGCATAATATTCAGCCAAGCCAAATTGCTGCGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCAGGATCTCAAGTAAAGACGTTAGCGTATCCCTTGTTTCGTCGTGGCACACCCCCACACACCAGTACCACCCGACTCAAGGGGACCAGAAAACGCCTTTCGG
TTTACTCTCAATCTTTGCCGCCTTCCTTAACAAGCCCTCGAGCCTCGTTTGCATCGTCATAGAAGCGACCGGGTTGACCCAATATTGGCCCAAGGCCCACAAAAGGCCCA
ATATTGGCCCAACAACGAAACTGTCGCCGCCGGATTCCGAACTCAATCCTTTCTCAACGACGGACAGAAATGAAGGCAAAGGAGAAGCCATCGAGCTCGAAATCCCCCGC
CTCTCGCCCTGCTTTTCTTTCATAGCCTTCGCAATGTCGTCGTCTTCTTCCTTAGCGCATCGGCATAATATTCAGCCAAGCCAAATTGCTGCGCAGTAG
Protein sequenceShow/hide protein sequence
MGFRISSKDVSVSLVSSWHTPTHQYHPTQGDQKTPFGLLSIFAAFLNKPSSLVCIVIEATGLTQYWPKAHKRPNIGPTTKLSPPDSELNPFSTTDRNEGKGEAIELEIPR
LSPCFSFIAFAMSSSSSLAHRHNIQPSQIAAQ