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Carg25848 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25848
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:3033033..3033449
RNA-Seq ExpressionCarg25848
SyntenyCarg25848
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020548.1 hypothetical protein SDJN02_17234, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-59100Show/hide
Query:  MITKATNSAINDNIRPVVSSNETENTNYLKSLNSNPQIQSCLELQDPILSMTKAEQIHLPLHVLSSQPYMMSTMTKTTERGCKLKVNDARPRPVRHFLEH
        MITKATNSAINDNIRPVVSSNETENTNYLKSLNSNPQIQSCLELQDPILSMTKAEQIHLPLHVLSSQPYMMSTMTKTTERGCKLKVNDARPRPVRHFLEH
Subjt:  MITKATNSAINDNIRPVVSSNETENTNYLKSLNSNPQIQSCLELQDPILSMTKAEQIHLPLHVLSSQPYMMSTMTKTTERGCKLKVNDARPRPVRHFLEH

Query:  SNPLKIRKLWFHNTNLGA
        SNPLKIRKLWFHNTNLGA
Subjt:  SNPLKIRKLWFHNTNLGA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACGAAAGCTACTAATTCTGCTATAAACGACAACATTCGACCCGTCGTATCGTCTAACGAAACAGAAAATACCAATTATCTGAAGTCTCTGAATTCAAATCCACA
GATACAATCTTGTCTAGAATTACAGGATCCAATCTTGTCTATGACTAAAGCTGAGCAAATACATTTGCCACTCCATGTCCTTTCATCTCAGCCATATATGATGTCTACAA
TGACCAAAACGACAGAGCGAGGCTGCAAGCTGAAGGTGAACGATGCTCGTCCCAGGCCTGTTCGACATTTTCTGGAACACTCGAACCCTTTGAAGATTCGAAAACTTTGG
TTCCACAATACCAATTTAGGGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAACGAAAGCTACTAATTCTGCTATAAACGACAACATTCGACCCGTCGTATCGTCTAACGAAACAGAAAATACCAATTATCTGAAGTCTCTGAATTCAAATCCACA
GATACAATCTTGTCTAGAATTACAGGATCCAATCTTGTCTATGACTAAAGCTGAGCAAATACATTTGCCACTCCATGTCCTTTCATCTCAGCCATATATGATGTCTACAA
TGACCAAAACGACAGAGCGAGGCTGCAAGCTGAAGGTGAACGATGCTCGTCCCAGGCCTGTTCGACATTTTCTGGAACACTCGAACCCTTTGAAGATTCGAAAACTTTGG
TTCCACAATACCAATTTAGGGGCCTAG
Protein sequenceShow/hide protein sequence
MITKATNSAINDNIRPVVSSNETENTNYLKSLNSNPQIQSCLELQDPILSMTKAEQIHLPLHVLSSQPYMMSTMTKTTERGCKLKVNDARPRPVRHFLEHSNPLKIRKLW
FHNTNLGA