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Carg25874 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25874
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:4816377..4819820
RNA-Seq ExpressionCarg25874
SyntenyCarg25874
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5525715.1 hypothetical protein RHGRI_032122 [Rhododendron griersonianum]4.7e-1161.54Show/hide
Query:  MSPTAVNISDNPKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIPE
        M PTAVNIS++PKI NCGVIQK++I  F  T E LL FSI AA+T+E V  KRP PI  +G IP+
Subjt:  MSPTAVNISDNPKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIPE
KAG7031345.1 hypothetical protein SDJN02_05385, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-133100Show/hide
Query:  MRKIMLSFWSLQHKPSSGGEQNERTPLLVWLDPIGSDTLWFCDIGKQWDLQMIGDETPTSSDGGGNGRSNLTLISELWSRLKNHLIQNSMSPTAVNISDN
        MRKIMLSFWSLQHKPSSGGEQNERTPLLVWLDPIGSDTLWFCDIGKQWDLQMIGDETPTSSDGGGNGRSNLTLISELWSRLKNHLIQNSMSPTAVNISDN
Subjt:  MRKIMLSFWSLQHKPSSGGEQNERTPLLVWLDPIGSDTLWFCDIGKQWDLQMIGDETPTSSDGGGNGRSNLTLISELWSRLKNHLIQNSMSPTAVNISDN

Query:  PKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIPERIWLLRSKDLSLFKETLKNERIRQLYDYWFGFHEAFEGWKDKLAFS
        PKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIPERIWLLRSKDLSLFKETLKNERIRQLYDYWFGFHEAFEGWKDKLAFS
Subjt:  PKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIPERIWLLRSKDLSLFKETLKNERIRQLYDYWFGFHEAFEGWKDKLAFS

Query:  SKQRQQRPEKHIYFLWISMRNKLKNGKIKSQHS
        SKQRQQRPEKHIYFLWISMRNKLKNGKIKSQHS
Subjt:  SKQRQQRPEKHIYFLWISMRNKLKNGKIKSQHS
TrEMBL top hitse value%identityAlignment
A0A0A9FAD9 Uncharacterized protein1.5e-0754.69Show/hide
Query:  MSPTAVNISDNPKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIP
        MSPTAVNISD+P  RNCG IQK++     +T    L  S  AA T+ENV  KRP P+R+ G IP
Subjt:  MSPTAVNISDNPKIRNCGVIQKIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGATTATGTTGTCATTTTGGTCTCTGCAGCATAAGCCTTCTTCGGGTGGGGAGCAAAATGAAAGAACACCTCTTCTTGTTTGGTTGGATCCGATTGGTTCGGA
TACACTATGGTTTTGTGATATAGGTAAGCAATGGGATTTGCAAATGATAGGTGACGAAACACCAACATCCTCTGATGGTGGTGGAAATGGACGGTCTAATTTGACTCTAA
TCTCTGAGCTTTGGAGTAGACTGAAAAATCATTTAATCCAGAACTCAATGAGTCCAACTGCTGTGAACATCTCTGACAATCCAAAAATAAGGAACTGTGGTGTGATCCAG
AAGATCGATATCGTCTGGTTCGAATTCACAGCTGAATCTCTTCTCTTTTTCTCCATTATAGCTGCTGAAACCATCGAAAATGTGGAGAGGAAGAGGCCAAAGCCAATACG
TTTTAAGGGTGAGATTCCAGAGAGAATTTGGCTTTTACGTTCAAAAGATTTGAGCTTGTTTAAGGAAACTCTTAAGAATGAGAGGATAAGGCAACTTTATGATTACTGGT
TTGGCTTCCATGAAGCATTTGAGGGTTGGAAGGACAAACTTGCTTTCTCTTCAAAACAGCGGCAACAAAGACCTGAAAAACATATATATTTTCTTTGGATTAGTATGAGA
AATAAACTCAAAAATGGAAAAATAAAATCTCAACATTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGATTATGTTGTCATTTTGGTCTCTGCAGCATAAGCCTTCTTCGGGTGGGGAGCAAAATGAAAGAACACCTCTTCTTGTTTGGTTGGATCCGATTGGTTCGGA
TACACTATGGTTTTGTGATATAGGTAAGCAATGGGATTTGCAAATGATAGGTGACGAAACACCAACATCCTCTGATGGTGGTGGAAATGGACGGTCTAATTTGACTCTAA
TCTCTGAGCTTTGGAGTAGACTGAAAAATCATTTAATCCAGAACTCAATGAGTCCAACTGCTGTGAACATCTCTGACAATCCAAAAATAAGGAACTGTGGTGTGATCCAG
AAGATCGATATCGTCTGGTTCGAATTCACAGCTGAATCTCTTCTCTTTTTCTCCATTATAGCTGCTGAAACCATCGAAAATGTGGAGAGGAAGAGGCCAAAGCCAATACG
TTTTAAGGGTGAGATTCCAGAGAGAATTTGGCTTTTACGTTCAAAAGATTTGAGCTTGTTTAAGGAAACTCTTAAGAATGAGAGGATAAGGCAACTTTATGATTACTGGT
TTGGCTTCCATGAAGCATTTGAGGGTTGGAAGGACAAACTTGCTTTCTCTTCAAAACAGCGGCAACAAAGACCTGAAAAACATATATATTTTCTTTGGATTAGTATGAGA
AATAAACTCAAAAATGGAAAAATAAAATCTCAACATTCCTAG
Protein sequenceShow/hide protein sequence
MRKIMLSFWSLQHKPSSGGEQNERTPLLVWLDPIGSDTLWFCDIGKQWDLQMIGDETPTSSDGGGNGRSNLTLISELWSRLKNHLIQNSMSPTAVNISDNPKIRNCGVIQ
KIDIVWFEFTAESLLFFSIIAAETIENVERKRPKPIRFKGEIPERIWLLRSKDLSLFKETLKNERIRQLYDYWFGFHEAFEGWKDKLAFSSKQRQQRPEKHIYFLWISMR
NKLKNGKIKSQHS