CuGenDBv2

Gene ID	Carg25928
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B-like cyclin
Genome location	Carg_Chr04:10968144..10970031
RNA-Seq Expression	Carg25928
Synteny	Carg25928
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0051301 - cell division (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039361 - Cyclin

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601645.1 putative clathrin assembly protein, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-52

94.07

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPVLPW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

KAG7032404.1 Cyclin-J18 [Cucurbita argyrosperma subsp. argyrosperma]

9.1e-59

100

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPFY
        EFPVLPWGKLHLQFISPFY
Subjt:  EFPVLPWGKLHLQFISPFY

XP_022957558.1 cyclin-J18 isoform X1 [Cucurbita moschata]

2.2e-52

94.07

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPVLPW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

XP_023525659.1 cyclin-J18 isoform X1 [Cucurbita pepo subsp. pepo]

2.2e-52

94.07

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPVLPW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

XP_023525674.1 cyclin-J18 isoform X3 [Cucurbita pepo subsp. pepo]

2.2e-52

94.07

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPVLPW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GZG4 B-like cyclin

2.6e-51

100

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPW
        EFPVLPW
Subjt:  EFPVLPW

A0A6J1H0W7 B-like cyclin

1.0e-52

94.07

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPVLPW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

A0A6J1K886 B-like cyclin

4.4e-51

92.37

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSP SLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPV+PW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

A0A6J1KCS9 B-like cyclin

4.4e-51

92.37

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSP SLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKLHLQFISPF
        EFPV+PW    +QF+ PF
Subjt:  EFPVLPWGKLHLQFISPF

A0A6J1KEL5 B-like cyclin

1.1e-49

98.13

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSP SLAAAILVASYLITVPVQEW
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPW
        EFPV+PW
Subjt:  EFPVLPW

SwissProt top hits

e value

%identity

Alignment

Q0DTM7 Cyclin-J18-like

1.1e-30

51.4

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        +I +QHF  RD  +AE++FM+++++ IG+ NI F +LEELL+QF+E++K+G+L+N + CM+++D+LYE E++S  ++SPC LAA+ LV +Y I+VP Q W
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPW
        EFP+LPW
Subjt:  EFPVLPW

Q9C5X2 Cyclin-J18

2.3e-36

68.18

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        +I EQ FM RD LDAE++F+++LKFEIGT NI +  LE+LLIQFKEVAKVGE +N+EACMD+MDLLYEKE+TS+ Y S  SLAA+ILV+SY+ITVP Q++
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKL
        EFP+LPW K+
Subjt:  EFPVLPWGKL

Arabidopsis top hits

e value

%identity

Alignment

AT2G01905.1 cyclin J18

1.6e-37

68.18

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Query:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW
        +I EQ FM RD LDAE++F+++LKFEIGT NI +  LE+LLIQFKEVAKVGE +N+EACMD+MDLLYEKE+TS+ Y S  SLAA+ILV+SY+ITVP Q++
Subjt:  MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEW

Query:  EFPVLPWGKL
        EFP+LPW K+
Subjt:  EFPVLPWGKL

Sequences

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CDS sequence

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ATGATTAAGGAACAACATTTCATGACCCGGGATTTATTGGATGCAGAGGTCATATTCATGCAGATATTGAAGTTTGAGATTGGAACTGCTAATATCACTTTTGTATTTCT
TGAGGAACTTCTTATTCAATTCAAGGAAGTAGCGAAAGTTGGGGAGCTTGTGAACTGGGAAGCATGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTG
TGTCTTACAGTTCTCCTTGTTCTTTAGCTGCTGCCATCTTGGTTGCTTCATATCTCATCACTGTTCCAGTGCAAGAATGGGAATTTCCAGTTCTTCCCTGGGGTAAGTTG
CATTTACAGTTCATCTCTCCTTTTTATTAA

mRNA sequence

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CGTAGGCGTGTTTGTTGTATCGTAGACATTGGCATGCAATGCAACTACGCGATGAAGGGAAGCAGAACAACGATGGAGAGTGAGAACTTACCGATTCTGAGAATTCGCGT
CGTCACATTCCTTATTCAATCTGCTCATGTGAATCTTCTTTCACTCCCAACAATTTTCAGTTCTAGAAGGCGGAAAGCAGCAAATTTCTCAGAATCTTTTGGAAACTTCT
CTTCTCCAAATTTCAGTTCTAGTTTTACCTATTCTTCTTTCGTCCTCTACTCACTTTTGTTTCTGGCTTGAATCAATTTTCTTGGTAGGATCTCGAAGTGGCTCCGATCG
TCAAATACTCCGCGTTGTCACTTTTCGCTGATAGATTCTACCCATCGCTTTCTGGAATCACCAGCAGCAATGCCTCAAGAAATTGGCTTCTGCAACCAATCACAGAGAGC
AATTTGCAGTTATTTGCACTTGTTTCCTTATGGATATCTAGCAAATTGCACACTTCTCATCCTCTTTCTATAAAACTTCTGAAATCTTTTGGGGATAAGATGATTAAGGA
ACAACATTTCATGACCCGGGATTTATTGGATGCAGAGGTCATATTCATGCAGATATTGAAGTTTGAGATTGGAACTGCTAATATCACTTTTGTATTTCTTGAGGAACTTC
TTATTCAATTCAAGGAAGTAGCGAAAGTTGGGGAGCTTGTGAACTGGGAAGCATGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTGTCTTACAGT
TCTCCTTGTTCTTTAGCTGCTGCCATCTTGGTTGCTTCATATCTCATCACTGTTCCAGTGCAAGAATGGGAATTTCCAGTTCTTCCCTGGGGTAAGTTGCATTTACAGTT
CATCTCTCCTTTTTATTAA

Protein sequence

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MIKEQHFMTRDLLDAEVIFMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSSPCSLAAAILVASYLITVPVQEWEFPVLPWGKL
HLQFISPFY

Carg25928 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome