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Carg25955 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25955
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionComplex I-B22
Genome locationCarg_Chr20:3953264..3954093
RNA-Seq ExpressionCarg25955
SyntenyCarg25955
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3791.76Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS+SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

KAG7010888.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-40100Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]5.2e-4098.82Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

XP_022944758.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X2 [Cucurbita moschata]5.2e-4098.82Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]6.3e-3894.12Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A+KHVEDLD IDR+IADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

TrEMBL top hitse value%identityAlignment
A0A6J1FYY7 Complex I-B222.5e-4098.82Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

A0A6J1FYZ0 Complex I-B222.5e-4098.82Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

A0A6J1J845 Complex I-B222.5e-4098.82Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

A0A6J1JEK9 Complex I-B222.5e-4098.82Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

A0A6J1L2P5 Complex I-B224.4e-3790.59Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS+SSTAGYLARRAAQ+ERVRILYRRALK+TLNWAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.0e-0631.76Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        M+  S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RFD +K+ +D+ +  +++ + E  +   +HP PYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 99.6e-0530.59Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        M+  ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RF+ +K+ +D+ R  +++ + E  +   +HP PYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 94.7e-0429.73Show/hide
Query:  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        R    +++V  LY+RAL+   +W V R  +   A  +R RF+ +K+ +D+ +  +++ + E  +   +HP PYI
Subjt:  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 94.0e-3582.35Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F+ N+ VED+DRID++IA GEA YNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.5e-0531.88Show/hide
Query:  KERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        +++V  LY+RAL+   +W +HR  +   A  +R RF+ +K+ +D+ R  +++ + E  + + +HP PYI
Subjt:  KERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein2.8e-3682.35Show/hide
Query:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F+ N+ VED+DRID++IA GEA YNKWRHPDPYI
Subjt:  MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCCCTCAAAGACACTCTCAATTGGGCTGTTCA
TCGCCATCTCTTTTATCGAGATGCGTCGGACCTCCGGGAGAGATTCGATGCAAACAAGCACGTGGAAGATCTTGACAGAATAGATAGGATGATAGCTGATGGAGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATC
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCCCTCAAAGACACTCTCAATTGGGCTGTTCA
TCGCCATCTCTTTTATCGAGATGCGTCGGACCTCCGGGAGAGATTCGATGCAAACAAGCACGTGGAAGATCTTGACAGAATAGATAGGATGATAGCTGATGGAGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATC
Protein sequenceShow/hide protein sequence
MSLSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDRIDRMIADGEASYNKWRHPDPYI