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Carg25967 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25967
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:3868475..3875082
RNA-Seq ExpressionCarg25967
SyntenyCarg25967
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571061.1 hypothetical protein SDJN03_29976, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0587.1Show/hide
Query:  TWTYLHFNLDLTRDSLHRARYPLQLGHFLAP
        TWTYLHFNLDLTRDSLHRARYPLQL   L+P
Subjt:  TWTYLHFNLDLTRDSLHRARYPLQLGHFLAP

KAG7010876.1 hypothetical protein SDJN02_27674, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-74100Show/hide
Query:  MGLRTDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSM
        MGLRTDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSM
Subjt:  MGLRTDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSM

Query:  LRFAVTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG
        LRFAVTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG
Subjt:  LRFAVTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG

XP_022986722.1 uncharacterized protein LOC111484388 isoform X1 [Cucurbita maxima]1.0e-08100Show/hide
Query:  TDPINVHPYQYLHTQKGETECMIADMLDAG
        TDPINVHPYQYLHTQKGETECMIADMLDAG
Subjt:  TDPINVHPYQYLHTQKGETECMIADMLDAG

XP_022986723.1 uncharacterized protein LOC111484388 isoform X2 [Cucurbita maxima]5.9e-0937.78Show/hide
Query:  TDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSMLRFA
        TDPINVHPYQYLHTQKGETECMIADMLDAG                                      I+Q                             
Subjt:  TDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSMLRFA

Query:  VTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG
                  +V PPVGWL PNSSSAL S S NEG
Subjt:  VTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG

TrEMBL top hitse value%identityAlignment
A0A6J1J8C8 uncharacterized protein LOC111484388 isoform X14.9e-09100Show/hide
Query:  TDPINVHPYQYLHTQKGETECMIADMLDAG
        TDPINVHPYQYLHTQKGETECMIADMLDAG
Subjt:  TDPINVHPYQYLHTQKGETECMIADMLDAG

A0A6J1JHD6 uncharacterized protein LOC111484388 isoform X22.9e-0937.78Show/hide
Query:  TDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSMLRFA
        TDPINVHPYQYLHTQKGETECMIADMLDAG                                      I+Q                             
Subjt:  TDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSMLRFA

Query:  VTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG
                  +V PPVGWL PNSSSAL S S NEG
Subjt:  VTAPNSLAQGIVKPPVGWLNPNSSSALSSKSTNEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTACGTACCGATCCCATTAACGTGCACCCCTACCAGTATCTGCATACTCAAAAAGGGGAAACTGAATGCATGATAGCTGACATGCTAGATGCGGGCACATGGAC
CTACTTGCATTTCAACTTGGATTTGACTCGAGACTCGCTTCATAGAGCACGATATCCTCTTCAGCTTGGCCACTTCCTGGCCCCAGCCTCGGATCCACTTAGCTCCATAT
TGCAGGACTTTCGTCAAAGCAGTCGCTCACCGAGCACCTCGCCAACAAAAATTAAGTTCATTTTTCCATATGGAAGTATGTTAAGATTTGCAGTCACAGCTCCAAATTCA
TTGGCTCAGGGAATCGTCAAACCTCCAGTTGGTTGGCTGAATCCAAACTCTTCTTCAGCCCTATCGAGCAAGTCCACGAACGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTACGTACCGATCCCATTAACGTGCACCCCTACCAGTATCTGCATACTCAAAAAGGGGAAACTGAATGCATGATAGCTGACATGCTAGATGCGGGCACATGGAC
CTACTTGCATTTCAACTTGGATTTGACTCGAGACTCGCTTCATAGAGCACGATATCCTCTTCAGCTTGGCCACTTCCTGGCCCCAGCCTCGGATCCACTTAGCTCCATAT
TGCAGGACTTTCGTCAAAGCAGTCGCTCACCGAGCACCTCGCCAACAAAAATTAAGTTCATTTTTCCATATGGAAGTATGTTAAGATTTGCAGTCACAGCTCCAAATTCA
TTGGCTCAGGGAATCGTCAAACCTCCAGTTGGTTGGCTGAATCCAAACTCTTCTTCAGCCCTATCGAGCAAGTCCACGAACGAAGGATGACTCAAGTACGATATCGGAAC
AAAAAACCGCTTCCTCTCGGTTTCTCCTACGTAAACCGGAATGTGGCCTTTGGGAACATTTGACTGACATACTACAGAAACAGACTGCATCTTGAGAATTTGCTTAGCAG
CACCAAGGAGTATCGAAAGCAAACGAATTCCCATCGTAAATTTGATTGAAGTGAGACGACAGCAACGAAGACGAAGAACGTCAAACGGGTATTGAATATGGATGTAGAAG
TAGCTATAGCTAGTAAACTTCAATGCTTGGATGAGAAAATGTGAGAGATTTAAGTTGTAGATCAGCTGTTTGTTTGGTATCTATATATAGGCAACCAAGAAAGCTGGCTT
CATCAATGGCTCACATGGGTTGCTCATTTGAACCAATTTATGGTAAGCTGGCCCCATCAGCCACAACATATGAAGCTCATATTCTTAACAAAGTGGGTCGCAGATACTTG
GAGGTACTTCCAAATAGCATTACAACCATGCCAAGGAAACTAGATGTTGCCCCAATAAAGGCTTGGCGTCGCCCAACACTTGGCACAAATTTGGGGGCTGATATCTCCAC
ATCCACAAAATTCTTGTTTGTGGCCGAGGGGGAAAGTGCGTTGGAACAAAGTTAGCTATGTAAAAAGTTGGTACACACTTGGAGCGTTTATGTTTGGAATGTGCGGCGTA
GACACTGCAAATAATTTACTAATATAAGGTAGGATCATCTTGTGGACGCCTCCTTACATAATTGAAGGGACACATTTTGAACGAGCGGGTTTTCTCTGGAGCGGTTGACT
AGCAAGTCTACTATCTCCACGACTTTTTCCTTTATCGTGAATTGGATTGAATCGAGACATTTTTTAGACTTAATTTAATTATTTGATTCGTA
Protein sequenceShow/hide protein sequence
MGLRTDPINVHPYQYLHTQKGETECMIADMLDAGTWTYLHFNLDLTRDSLHRARYPLQLGHFLAPASDPLSSILQDFRQSSRSPSTSPTKIKFIFPYGSMLRFAVTAPNS
LAQGIVKPPVGWLNPNSSSALSSKSTNEG