; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25989 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25989
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationCarg_Chr11:4517729..4518659
RNA-Seq ExpressionCarg25989
SyntenyCarg25989
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588219.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5871.35Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG
        +KSTWVPAARRR    L +A        GTSSGSTSGGK+           +H  T+N     F              +LPEQVRAPAVFKCVRVTAVEG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG

Query:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GG+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAG SGYGNPIN
Subjt:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

KAG7022130.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5871.35Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG
        +KSTWVPAARRR    L +A        GTSSGSTSGGK+           +H  T+N     F              +LPEQVRAPAVFKCVRVTAVEG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG

Query:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GG+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAG SGYGNPIN
Subjt:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

KAG7022134.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-108100Show/hide
Query:  MTVGTKLRKTATTAGAGVAVKAEDLTVLGLTLKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAEAHCITNNHQFSHFHFQYLQHEASTLAQ
        MTVGTKLRKTATTAGAGVAVKAEDLTVLGLTLKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAEAHCITNNHQFSHFHFQYLQHEASTLAQ
Subjt:  MTVGTKLRKTATTAGAGVAVKAEDLTVLGLTLKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAEAHCITNNHQFSHFHFQYLQHEASTLAQ

Query:  LPEQVRAPAVFKCVRVTAVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSG
        LPEQVRAPAVFKCVRVTAVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSG
Subjt:  LPEQVRAPAVFKCVRVTAVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSG

Query:  YGNPIN
        YGNPIN
Subjt:  YGNPIN

XP_022933450.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita moschata]4.1e-5972.97Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG
        +KSTWVPAARRR   ++LSA        GTSSGSTSGGK+           +H  T+N     F              +LPEQVRAPAVFKCVRVTAVEG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG

Query:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
Subjt:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

XP_022933451.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucurbita moschata]4.1e-5973.37Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGG
        +KSTWVPAARRR   ++LSA        GTSSGSTSGGK+           +H  T+N     F             +LPEQVRAPAVFKCVRVTAVEGG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGG

Query:  GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
Subjt:  GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

TrEMBL top hitse value%identityAlignment
A0A5A7UJ85 Protein LATERAL ROOT PRIMORDIUM 17.1e-4965.05Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLA-QLPEQVRAPAVFKCVRVTAVEG
        +KSTWVPAARRR    + +A        GTSSGSTSGGK+           +H  T+N     F        +S  A +LPEQ+RAPAVFKCVRVTAVEG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLA-QLPEQVRAPAVFKCVRVTAVEG

Query:  GGT-GGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        G + GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP +S+LHL   GDGGSTSSP+IDPSDVYGSSA RGGGLAG SGYGN IN
Subjt:  GGT-GGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

A0A6J1EZ30 protein LATERAL ROOT PRIMORDIUM 1-like isoform X22.0e-5973.37Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGG
        +KSTWVPAARRR   ++LSA        GTSSGSTSGGK+           +H  T+N     F             +LPEQVRAPAVFKCVRVTAVEGG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGG

Query:  GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
Subjt:  GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

A0A6J1F4X3 protein LATERAL ROOT PRIMORDIUM 1-like isoform X12.0e-5972.97Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG
        +KSTWVPAARRR   ++LSA        GTSSGSTSGGK+           +H  T+N     F              +LPEQVRAPAVFKCVRVTAVEG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG

Query:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
Subjt:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

A0A6J1ID91 protein LATERAL ROOT PRIMORDIUM 1-like isoform X11.7e-5871.89Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG
        +KSTWVPAARRR   ++LSA        GTSSGSTSGGK+           +H  T+N     F              +LPEQVRAPAVFKCVRVTAVEG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFH-FQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEG

Query:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        GG+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAG SGYGNPIN
Subjt:  GGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

A0A6J1IFF1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X21.7e-5872.28Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGG
        +KSTWVPAARRR   ++LSA        GTSSGSTSGGK+           +H  T+N     F             +LPEQVRAPAVFKCVRVTAVEGG
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE---------AEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGG

Query:  GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
        G+GGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAG SGYGNPIN
Subjt:  GTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 12.0e-0828.65Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAE---AHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGGGTGGNE
        +KSTWVPAA+RR   + L+A +++++    ++ +    ++ E   A  + +    S+ +          + + P +VR  AVF+C++++++E      ++
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAE---AHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGGGTGGNE

Query:  YAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGG--LAGSSGYGNP
         AYQA V IGGHVFKG LYD G E++    + +      GG  G       + + V  ++   GG    AG S + +P
Subjt:  YAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGG--LAGSSGYGNP

O65517 Protein SHI RELATED SEQUENCE 22.6e-1134.41Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTS---SGSTSGGKEAEAHCITNNHQ-----FSHFHFQYLQHEAST---LAQLPEQVRAPAVFKCVRVTAVE
        ++STW+P ARRR         R+++ H  TS    GS SGG       I   H+      +    +   H A      A  P +V + A+F+CV+++ V+
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTS---SGSTSGGKEAEAHCITNNHQ-----FSHFHFQYLQHEAST---LAQLPEQVRAPAVFKCVRVTAVE

Query:  GGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
         GG G  +YAYQ  V IGGH+FKG LYD G E+          ++ GG  G          SD   SSAG GGG       G+P N
Subjt:  GGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 16.7e-2847.51Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT
        +KSTWV AARRR   +++  G       G+S  ++SG K             +A +H  T+N     F     + +     +  P QVRA AVFKCVRVT
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT

Query:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG
        AVE    G +EYAYQAVVKIGGHVFKG+LYD G+E +EGFP +SDLHLGG     +G S S+PI+DP + VYG   G GGG
Subjt:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG

Q9LQZ5 Protein SHI RELATED SEQUENCE 52.8e-1035.77Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE-AEAHCITNNHQFSH--------FHFQYLQHEAST----LAQLPEQVRAPAVFKCVRVTA
        +KSTWVPAA+RR     L++     +H   SS  T   K   EA    NN    H         + + +   +++       LP +V +PA+F+CVRV++
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE-AEAHCITNNHQFSH--------FHFQYLQHEAST----LAQLPEQVRAPAVFKCVRVTA

Query:  VEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEARE
        +E        YAYQ  V IGGH+FKG LYD G E ++
Subjt:  VEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEARE

Q9XGX0 Protein SHORT INTERNODES8.2e-1034.46Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGGGTGGNEYAY
        +KSTWVPAA+RR   + LS G++ ++  G      S  K         +   ++            +   P +V + AVF+CVRV++V+       EYAY
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAVFKCVRVTAVEGGGTGGNEYAY

Query:  QAVVKIGGHVFKGYLYDHGVEAREGFPMLSD-LHLGGGGDGGSTSSPIIDPSD-VYGSSAGRGGGLAGSSGYGNPIN
        +  V IGGHVFKG LYD G   R      S  L+L   G   S+SSP +  ++ V GS++      A S  Y  PIN
Subjt:  QAVVKIGGHVFKGYLYDHGVEAREGFPMLSD-LHLGGGGDGGSTSSPIIDPSD-VYGSSAGRGGGLAGSSGYGNPIN

Arabidopsis top hitse value%identityAlignment
AT1G75520.1 SHI-related sequence 52.0e-1135.77Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE-AEAHCITNNHQFSH--------FHFQYLQHEAST----LAQLPEQVRAPAVFKCVRVTA
        +KSTWVPAA+RR     L++     +H   SS  T   K   EA    NN    H         + + +   +++       LP +V +PA+F+CVRV++
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKE-AEAHCITNNHQFSH--------FHFQYLQHEAST----LAQLPEQVRAPAVFKCVRVTA

Query:  VEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEARE
        +E        YAYQ  V IGGH+FKG LYD G E ++
Subjt:  VEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEARE

AT4G36260.1 Lateral root primordium (LRP) protein-related1.8e-1234.41Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTS---SGSTSGGKEAEAHCITNNHQ-----FSHFHFQYLQHEAST---LAQLPEQVRAPAVFKCVRVTAVE
        ++STW+P ARRR         R+++ H  TS    GS SGG       I   H+      +    +   H A      A  P +V + A+F+CV+++ V+
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTS---SGSTSGGKEAEAHCITNNHQ-----FSHFHFQYLQHEAST---LAQLPEQVRAPAVFKCVRVTAVE

Query:  GGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN
         GG G  +YAYQ  V IGGH+FKG LYD G E+          ++ GG  G          SD   SSAG GGG       G+P N
Subjt:  GGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN

AT5G12330.1 Lateral root primordium (LRP) protein-related4.8e-2947.51Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT
        +KSTWV AARRR   +++  G       G+S  ++SG K             +A +H  T+N     F     + +     +  P QVRA AVFKCVRVT
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT

Query:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG
        AVE    G +EYAYQAVVKIGGHVFKG+LYD G+E +EGFP +SDLHLGG     +G S S+PI+DP + VYG   G GGG
Subjt:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG

AT5G12330.2 Lateral root primordium (LRP) protein-related4.8e-2947.51Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT
        +KSTWV AARRR   +++  G       G+S  ++SG K             +A +H  T+N     F     + +     +  P QVRA AVFKCVRVT
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT

Query:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG
        AVE    G +EYAYQAVVKIGGHVFKG+LYD G+E +EGFP +SDLHLGG     +G S S+PI+DP + VYG   G GGG
Subjt:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG

AT5G12330.4 Lateral root primordium (LRP) protein-related4.8e-2947.51Show/hide
Query:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT
        +KSTWV AARRR   +++  G       G+S  ++SG K             +A +H  T+N     F     + +     +  P QVRA AVFKCVRVT
Subjt:  LKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGK-------------EAEAHCITNNHQFSHFHFQYLQHEASTLAQL-PEQVRAPAVFKCVRVT

Query:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG
        AVE    G +EYAYQAVVKIGGHVFKG+LYD G+E +EGFP +SDLHLGG     +G S S+PI+DP + VYG   G GGG
Subjt:  AVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGG---DGGSTSSPIIDPSD-VYGSSAGRGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTGGGAACCAAGCTAAGAAAGACTGCAACCACCGCCGGTGCCGGAGTTGCTGTAAAAGCCGAGGATTTGACTGTGCTTGGACTCACGTTGAAGAGCACGTGGGT
TCCAGCAGCCCGGCGGAGAGTCAACGCCAAGTTACTGAGCGCCGGCCGCCGCCGCCGCCGCCACTGTGGGACTTCATCGGGGTCCACCTCCGGCGGGAAAGAAGCCGAGG
CTCATTGCATCACAAACAACCACCAATTCTCACACTTCCACTTCCAATACCTCCAACACGAAGCTTCGACACTTGCTCAGCTGCCGGAACAAGTAAGAGCGCCGGCAGTG
TTCAAGTGCGTCCGGGTGACGGCGGTGGAGGGTGGCGGTACCGGCGGGAATGAATATGCATATCAAGCCGTGGTGAAGATCGGCGGCCATGTTTTCAAAGGCTATTTATA
CGACCATGGAGTGGAAGCTAGAGAAGGGTTTCCAATGTTGTCGGATTTGCATCTGGGAGGAGGCGGAGATGGCGGTTCAACATCGTCACCGATCATCGACCCTAGTGATG
TTTATGGAAGCTCCGCCGGGCGCGGTGGAGGATTGGCTGGGAGTTCCGGCTATGGTAATCCAATAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTGGGAACCAAGCTAAGAAAGACTGCAACCACCGCCGGTGCCGGAGTTGCTGTAAAAGCCGAGGATTTGACTGTGCTTGGACTCACGTTGAAGAGCACGTGGGT
TCCAGCAGCCCGGCGGAGAGTCAACGCCAAGTTACTGAGCGCCGGCCGCCGCCGCCGCCGCCACTGTGGGACTTCATCGGGGTCCACCTCCGGCGGGAAAGAAGCCGAGG
CTCATTGCATCACAAACAACCACCAATTCTCACACTTCCACTTCCAATACCTCCAACACGAAGCTTCGACACTTGCTCAGCTGCCGGAACAAGTAAGAGCGCCGGCAGTG
TTCAAGTGCGTCCGGGTGACGGCGGTGGAGGGTGGCGGTACCGGCGGGAATGAATATGCATATCAAGCCGTGGTGAAGATCGGCGGCCATGTTTTCAAAGGCTATTTATA
CGACCATGGAGTGGAAGCTAGAGAAGGGTTTCCAATGTTGTCGGATTTGCATCTGGGAGGAGGCGGAGATGGCGGTTCAACATCGTCACCGATCATCGACCCTAGTGATG
TTTATGGAAGCTCCGCCGGGCGCGGTGGAGGATTGGCTGGGAGTTCCGGCTATGGTAATCCAATAAATTGA
Protein sequenceShow/hide protein sequence
MTVGTKLRKTATTAGAGVAVKAEDLTVLGLTLKSTWVPAARRRVNAKLLSAGRRRRRHCGTSSGSTSGGKEAEAHCITNNHQFSHFHFQYLQHEASTLAQLPEQVRAPAV
FKCVRVTAVEGGGTGGNEYAYQAVVKIGGHVFKGYLYDHGVEAREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGSSGYGNPIN