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Carg25992 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25992
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
Genome locationCarg_Chr12:11600876..11604182
RNA-Seq ExpressionCarg25992
SyntenyCarg25992
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586427.1 hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia]8.0e-4676.6Show/hide
Query:  MAMGLQFPAAPMLTVRPEILGVR---------------------------------SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMH
        MAMGLQFPAAPMLTVRPEILGVR                                 SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMH
Subjt:  MAMGLQFPAAPMLTVRPEILGVR---------------------------------SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMH

Query:  QGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        QGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
Subjt:  QGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

KAG6599447.1 hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3289.41Show/hide
Query:  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

KAG7021282.1 hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-51100Show/hide
Query:  MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLS
        MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLS
Subjt:  MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLS

Query:  PKETLGSS
        PKETLGSS
Subjt:  PKETLGSS

KAG7030425.1 hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3679.81Show/hide
Query:  LQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKET
        LQF +  +L + P +L   SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA+ PVASLS KE+
Subjt:  LQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKET

Query:  LGSS
        LGSS
Subjt:  LGSS

XP_022946647.1 uncharacterized protein LOC111450652 [Cucurbita moschata]3.0e-3289.41Show/hide
Query:  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

TrEMBL top hitse value%identityAlignment
A0A061GNT6 Uncharacterized protein6.4e-1767.11Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPK
        MAS+G  ++ VS SPK  N +A    +S   GQCLCSPT HQGSFRCR HRS+SSAWMKRSKSMPAN  +ASLSPK
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPK

A0A0A0LKU3 Uncharacterized protein1.0e-3087.8Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSLSV VS SPKH NRDAET+RS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMP N PVASLSPKE+L SS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

A0A5A7V1X5 Uncharacterized protein1.2e-3190.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSL V VS SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN PVASLSPK +LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

A0A5D3CHP3 Uncharacterized protein9.3e-3290.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSL V VS+SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN PVASLSPK +LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

A0A6J1G498 uncharacterized protein LOC1114506521.4e-3289.41Show/hide
Query:  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein3.6e-0447.62Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN
        ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN

AT1G67910.1 unknown protein1.9e-0556.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA

AT1G67910.2 unknown protein1.9e-0556.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA

AT3G13227.1 serine-rich protein-related1.7e-0652.38Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN
        +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN

AT3G56500.1 serine-rich protein-related1.6e-0445.24Show/hide
Query:  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVAS
        K  C+C+PT H+GSFRCRLHRS++++    +  +   KP+ S
Subjt:  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGGATTGCAGTTTCCCGCCGCGCCGATGCTCACTGTCAGACCTGAAATTCTCGGAGTTAGGTCTGCAGATATGGCCTCCAATGGCAGCCTTAGCGTTGTGGT
TTCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGATGCACCAAGGCTCCTTTAGGTGTC
GGCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTTCTCCTAAGGAAACTCTTGGATCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGGGATTGCAGTTTCCCGCCGCGCCGATGCTCACTGTCAGACCTGAAATTCTCGGAGTTAGGTCTGCAGATATGGCCTCCAATGGCAGCCTTAGCGTTGTGGT
TTCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGATGCACCAAGGCTCCTTTAGGTGTC
GGCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTTCTCCTAAGGAAACTCTTGGATCTTCCTAA
Protein sequenceShow/hide protein sequence
MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS