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Carg26038 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26038
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmitochondrial import inner membrane translocase subunit TIM22-4
Genome locationCarg_Chr13:205735..211540
RNA-Seq ExpressionCarg26038
SyntenyCarg26038
Gene Ontology termsGO:0006694 - steroid biosynthetic process (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity (molecular function)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583344.1 hypothetical protein SDJN03_19276, partial [Cucurbita argyrosperma subsp. sororia]1.6e-19100Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVI
        MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVI
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVI
KAG7019114.1 hypothetical protein SDJN02_18072, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-23100Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIGFVQEI
        MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIGFVQEI
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIGFVQEI
KAG7037014.1 Mitochondrial import inner membrane translocase subunit TIM22-1 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-1380Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MAS SGD SS DPASS + EKPP E IR+PTVEEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
XP_022948292.1 mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita moschata]5.0e-1380Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MAS SGD SS DPASS + EKPP E IR+PTVEEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
XP_038893922.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Benincasa hispida]7.7e-1480Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MAS SGDRSSLDP +S+DSE PP E IR+PT+EEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
TrEMBL top hitse value%identityAlignment
A0A0A0M0Y0 Uncharacterized protein1.3e-1170.91Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MAS SGD SSLDP +S D++ PP + +R+PTVEEIRGQDIW+N AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
A0A6A1UPQ9 Mitochondrial import inner membrane translocase subunit TIM22-11.3e-1169.09Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MASG+G+ S+ D +SS ++E+PP E IR+PT+EEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
A0A6J1DKY7 mitochondrial import inner membrane translocase subunit TIM22-4-like4.5e-1272.73Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MA+ +G+ SS DP SS+++EKPP E IR+PTVEEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
A0A6J1G8S5 mitochondrial import inner membrane translocase subunit TIM22-42.4e-1380Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MAS SGD SS DPASS + EKPP E IR+PTVEEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
A0A6J1K8G7 mitochondrial import inner membrane translocase subunit TIM22-42.4e-1380Show/hide
Query:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        MAS SGD SS DPASS + EKPP E IR+PTVEEIRGQDIWNN AVRSVVSGV+G
Subjt:  MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
SwissProt top hitse value%identityAlignment
A1XJK0 Mitochondrial import inner membrane translocase subunit TIM22-44.4e-0466.67Show/hide
Query:  IPTVEEIRGQDIWNNGAVRSVVSGVIG
        +PT+EEIR Q++WNN AVR+V SGV+G
Subjt:  IPTVEEIRGQDIWNNGAVRSVVSGVIG
A2RVP7 Mitochondrial import inner membrane translocase subunit TIM22-11.4e-0551.16Show/hide
Query:  PASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        P  + D      + IR+PT+EEIR Q++WNN AVR+V SGV+G
Subjt:  PASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
Arabidopsis top hitse value%identityAlignment
AT1G18320.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein3.1e-0566.67Show/hide
Query:  IPTVEEIRGQDIWNNGAVRSVVSGVIG
        +PT+EEIR Q++WNN AVR+V SGV+G
Subjt:  IPTVEEIRGQDIWNNGAVRSVVSGVIG
AT3G10110.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein9.7e-0751.16Show/hide
Query:  PASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG
        P  + D      + IR+PT+EEIR Q++WNN AVR+V SGV+G
Subjt:  PASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGGTTCCGGAGATAGATCGTCGCTCGATCCAGCCAGCTCCGACGACTCGGAGAAGCCTCCAACTGAGGCTATAAGGATCCCCACAGTCGAAGAGATTCGCGG
CCAAGATATTTGGAACAACGGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATCGGTTTTGTTCAAGAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGGTTCCGGAGATAGATCGTCGCTCGATCCAGCCAGCTCCGACGACTCGGAGAAGCCTCCAACTGAGGCTATAAGGATCCCCACAGTCGAAGAGATTCGCGG
CCAAGATATTTGGAACAACGGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATCGGTTTTGTTCAAGAAATTTAA
Protein sequenceShow/hide protein sequence
MASGSGDRSSLDPASSDDSEKPPTEAIRIPTVEEIRGQDIWNNGAVRSVVSGVIGFVQEI