CuGenDBv2

Gene ID	Carg26043
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FAS1 domain-containing protein
Genome location	Carg_Chr04:16553727..16554623
RNA-Seq Expression	Carg26043
Synteny	Carg26043
Gene Ontology terms	NA
InterPro domains	IPR036378 - FAS1 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601841.1 hypothetical protein SDJN03_07074, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-71

78.84

Show/hide

Query:  FRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCRSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHK
        FRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCRSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHK
Subjt:  FRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCRSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHK

Query:  QPALTIFAPPDEFSDGTEVRTYLRGF---GINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKRSEMGMQVKATQIKL
        +PALTIFAPPD        R   + F       N  G +     M +       +ERIVVHGIGGILEMQKKTKRSEMGMQVKATQIKL
Subjt:  QPALTIFAPPDEFSDGTEVRTYLRGF---GINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKRSEMGMQVKATQIKL

KAG7032549.1 hypothetical protein SDJN02_06598, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-127

100

Show/hide

Query:  MALLWVQALMALFWASPKSTTSFLTPYLFRASDIYPPAPRSPPCFRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRII
        MALLWVQALMALFWASPKSTTSFLTPYLFRASDIYPPAPRSPPCFRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRII
Subjt:  MALLWVQALMALFWASPKSTTSFLTPYLFRASDIYPPAPRSPPCFRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRII

Query:  RPDLDCRSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPDEFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIV
        RPDLDCRSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPDEFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIV
Subjt:  RPDLDCRSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPDEFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIV

Query:  VHGIGGILEMQKKTKRSEMGMQVKATQIKL
        VHGIGGILEMQKKTKRSEMGMQVKATQIKL
Subjt:  VHGIGGILEMQKKTKRSEMGMQVKATQIKL

XP_004150482.3 putative fasciclin-like arabinogalactan protein 20 [Cucumis sativus]

1.1e-47

54.5

Show/hide

Query:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCR---SSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA
        +TN   +ISLNNVTVD PP+YDDGSLIIFGIEK FNPFF+  +  +KRI+ PD +CR    S I+S P+  LAA LRNRG +VM SFL+LQ LGFHK+ A
Subjt:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCR---SSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA

Query:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK
        +TIFAP D+        FSD                        G E++TYLRGF INV RS GVL +N++SVI+PDM YSE IVVHGIGGIL+++ + K
Subjt:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK

XP_008437696.2 PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis melo]

9.3e-52

Show/hide

Query:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC---RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA
        +TN   +ISLNNVTVD PP+YDDGSLIIFGIEKFFNPFFE  +  +KRII P+ +C   R S I+S+P+  LAA LRNRG SVM SFL++Q LGFHK+PA
Subjt:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC---RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA

Query:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK
        +TIFAP D+        FSD                        GTE++TYLRGFGINV RS GVL +N+ SVI+PDM YSE IVVHGIGGILE++K+ K
Subjt:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK

XP_022152344.1 putative fasciclin-like arabinogalactan protein 20 [Momordica charantia]

4.3e-57

63.21

Show/hide

Query:  QISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC-RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPD
        +ISLNNVTV   P+YDDGSL+IFGIEKFF+PFFES  V ++RI+RPDL+C  SSSIQSDP+G LAA LRNRG SVM SFL+LQFLGFH+QPALT+ AP D
Subjt:  QISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC-RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPD

Query:  --------------------------------EFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKR
                                        +F DGT + TYL+GF INVNRSGGVLM+N+MSVIFPDMFYSE IVVHGIGGILEMQ + KR
Subjt:  --------------------------------EFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KSZ5 Uncharacterized protein

5.2e-48

54.5

Show/hide

Query:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCR---SSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA
        +TN   +ISLNNVTVD PP+YDDGSLIIFGIEK FNPFF+  +  +KRI+ PD +CR    S I+S P+  LAA LRNRG +VM SFL+LQ LGFHK+ A
Subjt:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCR---SSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA

Query:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK
        +TIFAP D+        FSD                        G E++TYLRGF INV RS GVL +N++SVI+PDM YSE IVVHGIGGIL+++ + K
Subjt:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK

A0A1S3AV74 putative fasciclin-like arabinogalactan protein 20

4.5e-52

Show/hide

Query:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC---RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA
        +TN   +ISLNNVTVD PP+YDDGSLIIFGIEKFFNPFFE  +  +KRII P+ +C   R S I+S+P+  LAA LRNRG SVM SFL++Q LGFHK+PA
Subjt:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC---RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA

Query:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK
        +TIFAP D+        FSD                        GTE++TYLRGFGINV RS GVL +N+ SVI+PDM YSE IVVHGIGGILE++K+ K
Subjt:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK

A0A2N9FCH6 Uncharacterized protein

2.3e-32

40.89

Show/hide

Query:  QISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCRSSSIQSDPI---------GPLAAVLRNRGLSVMVSFLELQFLGFHKQPA
        +++LNNVTV+  P+YDDGSLIIFGI+KFFNP+F+    +  +    +L+C +S+ QS+ +            +A LR +G SVM SFL++QFLG  ++P 
Subjt:  QISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCRSSSIQSDPI---------GPLAAVLRNRGLSVMVSFLELQFLGFHKQPA

Query:  LTIFAPPDE---------------------------------FSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKT
        LT+FAP DE                                   DGTE+RTY  GF INV+RS G+L++N++ VI+PDM++S  +VVHGI  ILE  ++ 
Subjt:  LTIFAPPDE---------------------------------FSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKT

Query:  KRS
        K++
Subjt:  KRS

A0A5D3E3U8 Putative fasciclin-like arabinogalactan protein 20

4.5e-52

Show/hide

Query:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC---RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA
        +TN   +ISLNNVTVD PP+YDDGSLIIFGIEKFFNPFFE  +  +KRII P+ +C   R S I+S+P+  LAA LRNRG SVM SFL++Q LGFHK+PA
Subjt:  LTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC---RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPA

Query:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK
        +TIFAP D+        FSD                        GTE++TYLRGFGINV RS GVL +N+ SVI+PDM YSE IVVHGIGGILE++K+ K
Subjt:  LTIFAPPDE--------FSD------------------------GTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTK

A0A6J1DFR4 putative fasciclin-like arabinogalactan protein 20

2.1e-57

63.21

Show/hide

Query:  QISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC-RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPD
        +ISLNNVTV   P+YDDGSL+IFGIEKFF+PFFES  V ++RI+RPDL+C  SSSIQSDP+G LAA LRNRG SVM SFL+LQFLGFH+QPALT+ AP D
Subjt:  QISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDC-RSSSIQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPD

Query:  --------------------------------EFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKR
                                        +F DGT + TYL+GF INVNRSGGVLM+N+MSVIFPDMFYSE IVVHGIGGILEMQ + KR
Subjt:  --------------------------------EFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKR

SwissProt top hits

e value

%identity

Alignment

Q9FGW0 Putative fasciclin-like arabinogalactan protein 20

8.3e-11

24.14

Show/hide

Query:  IPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFF-NPFFESWDVYTKRII------RPDLDCRSSSIQSDPIGPLAA-------------------
        + + +  G + S+NNV V   P++DDG ++I+G ++FF +P   S D  +   I         +   SS+ Q+ P   +A+                   
Subjt:  IPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFF-NPFFESWDVYTKRII------RPDLDCRSSSIQSDPIGPLAA-------------------

Query:  -----VLRNRGLSVMVSFLELQFLG--FHKQPALTIFAPPDE--------FSD-------------------------GTEVRTYLRGFGINVNRSGGVL
             +L +RG  ++ +FL LQ           +T+FAP DE        FSD                         G+ ++T L+G+ I ++ SG +L
Subjt:  -----VLRNRGLSVMVSFLELQFLG--FHKQPALTIFAPPDE--------FSD-------------------------GTEVRTYLRGFGINVNRSGGVL

Query:  MVNNMSVIFPDMFYSERIVVHGIGGILEMQKK
        ++N + +I+PD++ ++ I VHG   ++  ++K
Subjt:  MVNNMSVIFPDMFYSERIVVHGIGGILEMQKK

Arabidopsis top hits

e value

%identity

Alignment

AT5G40940.1 putative fasciclin-like arabinogalactan protein 20

5.9e-12

24.14

Show/hide

Query:  IPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFF-NPFFESWDVYTKRII------RPDLDCRSSSIQSDPIGPLAA-------------------
        + + +  G + S+NNV V   P++DDG ++I+G ++FF +P   S D  +   I         +   SS+ Q+ P   +A+                   
Subjt:  IPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFF-NPFFESWDVYTKRII------RPDLDCRSSSIQSDPIGPLAA-------------------

Query:  -----VLRNRGLSVMVSFLELQFLG--FHKQPALTIFAPPDE--------FSD-------------------------GTEVRTYLRGFGINVNRSGGVL
             +L +RG  ++ +FL LQ           +T+FAP DE        FSD                         G+ ++T L+G+ I ++ SG +L
Subjt:  -----VLRNRGLSVMVSFLELQFLG--FHKQPALTIFAPPDE--------FSD-------------------------GTEVRTYLRGFGINVNRSGGVL

Query:  MVNNMSVIFPDMFYSERIVVHGIGGILEMQKK
        ++N + +I+PD++ ++ I VHG   ++  ++K
Subjt:  MVNNMSVIFPDMFYSERIVVHGIGGILEMQKK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTTGCTTTGGGTACAAGCTCTCATGGCTTTGTTTTGGGCTTCCCCAAAAAGTACCACCTCCTTCCTCACGCCTTATCTTTTCAGAGCCTCCGATATCTACCCTCC
GGCGCCAAGATCTCCACCATGCTTTCGACCGATTCCTCACCTCACTAACATTGGTGATCAGATTTCACTCAACAATGTTACCGTTGATAAGCCGCCGCTCTACGACGATG
GATCTCTCATAATCTTTGGAATCGAGAAGTTCTTCAATCCATTCTTCGAGAGTTGGGACGTGTATACCAAGAGAATCATCCGGCCTGATCTTGACTGCCGCAGTTCTTCG
ATTCAAAGCGATCCGATCGGGCCTCTGGCGGCGGTGCTGAGAAACAGAGGCTTATCGGTGATGGTTTCTTTTCTCGAGCTGCAGTTTCTAGGGTTTCATAAACAACCGGC
GTTGACGATTTTCGCTCCGCCCGATGAATTTTCGGATGGAACTGAAGTAAGGACGTACTTGAGAGGGTTTGGCATCAATGTGAATCGGAGTGGTGGTGTTTTGATGGTGA
ACAACATGTCGGTTATCTTTCCTGACATGTTCTACAGCGAGAGGATAGTCGTTCATGGCATTGGGGGAATTCTTGAGATGCAAAAGAAAACGAAAAGATCTGAAATGGGG
ATGCAAGTGAAAGCAACACAAATCAAGCTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALLWVQALMALFWASPKSTTSFLTPYLFRASDIYPPAPRSPPCFRPIPHLTNIGDQISLNNVTVDKPPLYDDGSLIIFGIEKFFNPFFESWDVYTKRIIRPDLDCRSSS
IQSDPIGPLAAVLRNRGLSVMVSFLELQFLGFHKQPALTIFAPPDEFSDGTEVRTYLRGFGINVNRSGGVLMVNNMSVIFPDMFYSERIVVHGIGGILEMQKKTKRSEMG
MQVKATQIKL

Carg26043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome