; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26046 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26046
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:16569444..16569923
RNA-Seq ExpressionCarg26046
SyntenyCarg26046
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601844.1 hypothetical protein SDJN03_07077, partial [Cucurbita argyrosperma subsp. sororia]7.3e-8098.75Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSAD-RRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSN
        MNS+NSLLSIPSTHSAPVLFPPISPSAD RRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSN
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSAD-RRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSN

Query:  YDSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        YDSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
Subjt:  YDSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

KAG7032552.1 hypothetical protein SDJN02_06601, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-81100Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
        MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY

Query:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
Subjt:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

XP_022952614.1 uncharacterized protein LOC111455246 [Cucurbita moschata]8.9e-7896.86Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
        MNS+NSLLSIPSTHSAP+LFPPISPSA  RRRRRPPAFTVTASS+PKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY

Query:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
Subjt:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

XP_022989988.1 uncharacterized protein LOC111487016 [Cucurbita maxima]4.4e-7796.23Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
        MNS+NSLLSIPSTHSAP+LFPPISPS+  RRRR PPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY

Query:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
Subjt:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

XP_023553368.1 uncharacterized protein LOC111810800 [Cucurbita pepo subsp. pepo]6.6e-8198.74Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
        MNS+NSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY

Query:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAV+LHRFIEIAVGLLAGIRLC
Subjt:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

TrEMBL top hitse value%identityAlignment
A0A0A0KPI5 Uncharacterized protein5.0e-4263.58Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRP-PAFTVTAS------SRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWE
        M S+NSL     + S P LF   SP+A    RR+P PA TV AS      S    + ++N+YYA GK+VDESMIVLRKRIHEIK AEQ  +PP DW DWE
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRP-PAFTVTAS------SRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWE

Query:  KRCYSNYDSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAG
        KR YS+YDS+ICEALGYLQSHLMNTRPSVALGML L+ +SVP+SSA++LHRF+ IAV LLAG
Subjt:  KRCYSNYDSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAG

A0A6J1FMN3 uncharacterized protein LOC1114453387.7e-5173.2Show/hide
Query:  SIPSTHSAPVL-FPPISPSADRRRRRRPPAFTVTASSR--PKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNIC
        SI S +SAP L F PIS S+  RRRRRPP FTV ASSR      +++N+YYA GKLVDESMIVLRKRIHEIK  E++H+PP DW DWEKRCYS+YDS+IC
Subjt:  SIPSTHSAPVL-FPPISPSADRRRRRRPPAFTVTASSR--PKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNIC

Query:  EALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL
        EALGYLQSHLMNTRPSVALG+L L+TLSVP+SSAV+LHRFI+IA  LLAG+RL
Subjt:  EALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL

A0A6J1GM73 uncharacterized protein LOC1114552464.3e-7896.86Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
        MNS+NSLLSIPSTHSAP+LFPPISPSA  RRRRRPPAFTVTASS+PKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY

Query:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
Subjt:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

A0A6J1JRY7 uncharacterized protein LOC1114870162.1e-7796.23Show/hide
Query:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
        MNS+NSLLSIPSTHSAP+LFPPISPS+  RRRR PPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY
Subjt:  MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNY

Query:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
        DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC
Subjt:  DSNICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC

A0A6J1JZG1 uncharacterized protein LOC1114892621.0e-5072.9Show/hide
Query:  SIPSTHSAPVL-FPPISPSADRRRRRRPPAFTVTASSRPKEQADS----NSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSN
        SI S +SAP L F PISPS+  RRRRR P FTV ASSR  + + S    N+YYA GKLVDESMIVLRKRIHEIK  EQ+H+PP DW DWEKRCYS+YDS+
Subjt:  SIPSTHSAPVL-FPPISPSADRRRRRRPPAFTVTASSRPKEQADS----NSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSN

Query:  ICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL
        ICEALGYLQSHLMNTRPSV+LG+L L+TLSVP+SSAV+LHRFI+IA  LLAG+RL
Subjt:  ICEALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein1.0e-2647.06Show/hide
Query:  ISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGYLQSHLMNTRPSV
        IS S  R    R      T ++R +       YY  G+ VDE+M+VLRKRIHE+K  E+  +PP  W  WEKR Y NYD+ IC+AL  LQ+ LMN+RPSV
Subjt:  ISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGYLQSHLMNTRPSV

Query:  ALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL
        A G   LL +SVPVSSAV   R +++A+ LL  + +
Subjt:  ALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL

AT2G01300.1 unknown protein5.9e-2746.31Show/hide
Query:  SLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNIC
        +L S P + S P+ F P+  S   +R   P    +T        +  + YY  G+LVDE+MIVLRKRIHE+K  E+ ++PP  W DWEKR Y++YDS IC
Subjt:  SLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNIC

Query:  EALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLA
        +++G LQS LMN+RP+VA+  L  L +SVPVSS V+  R I++   LLA
Subjt:  EALGYLQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAGTAAATTCCCTCCTCTCAATCCCCTCCACCCATTCCGCTCCCGTCCTCTTCCCTCCGATCTCCCCTTCCGCCGACCGCCGCCGCCGCCGACGACCACCGGC
CTTCACCGTAACTGCCTCGTCTCGACCAAAAGAACAAGCCGACAGCAACAGTTACTACGCGGACGGGAAACTAGTGGACGAGAGCATGATCGTGCTCCGGAAGCGGATCC
ACGAGATCAAGACCGCCGAGCAGACCCACGATCCGCCCCGCGATTGGTTCGACTGGGAGAAACGCTGCTATTCCAACTACGATTCCAACATCTGCGAGGCCCTTGGCTAC
CTTCAATCGCACTTAATGAACACCAGACCCAGCGTCGCCTTGGGAATGCTCGCGCTTCTTACTCTCAGCGTTCCGGTTTCCTCCGCCGTCGTTCTCCACCGCTTTATCGA
AATCGCCGTCGGGCTTCTCGCCGGAATCCGTCTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAGTAAATTCCCTCCTCTCAATCCCCTCCACCCATTCCGCTCCCGTCCTCTTCCCTCCGATCTCCCCTTCCGCCGACCGCCGCCGCCGCCGACGACCACCGGC
CTTCACCGTAACTGCCTCGTCTCGACCAAAAGAACAAGCCGACAGCAACAGTTACTACGCGGACGGGAAACTAGTGGACGAGAGCATGATCGTGCTCCGGAAGCGGATCC
ACGAGATCAAGACCGCCGAGCAGACCCACGATCCGCCCCGCGATTGGTTCGACTGGGAGAAACGCTGCTATTCCAACTACGATTCCAACATCTGCGAGGCCCTTGGCTAC
CTTCAATCGCACTTAATGAACACCAGACCCAGCGTCGCCTTGGGAATGCTCGCGCTTCTTACTCTCAGCGTTCCGGTTTCCTCCGCCGTCGTTCTCCACCGCTTTATCGA
AATCGCCGTCGGGCTTCTCGCCGGAATCCGTCTCTGTTAA
Protein sequenceShow/hide protein sequence
MNSVNSLLSIPSTHSAPVLFPPISPSADRRRRRRPPAFTVTASSRPKEQADSNSYYADGKLVDESMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGY
LQSHLMNTRPSVALGMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRLC