; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26062 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26062
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein light chain
Genome locationCarg_Chr04:16707102..16709093
RNA-Seq ExpressionCarg26062
SyntenyCarg26062
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601867.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-68100Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]3.3e-5787.41Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        M+G EMELERR+KFLNGLILKKKAGEQQEQ    LNVRVRASDM+FPLQNRAF+ AR+LLDSMP KLD+KRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKV+ILLFKT+VEPLSR  SLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

XP_022923609.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita moschata]1.8e-6698.52Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVEMELERRTKFLNGLILKKKA E QEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

XP_022990909.1 dynein light chain 2, cytoplasmic-like isoform X1 [Cucurbita maxima]2.5e-6596.3Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVEMELERRTKFLNGLILKKKA EQQ+QPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGT FGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKV+ILLFKTSVEPL+RATSLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

XP_023532540.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita pepo subsp. pepo]6.0e-6798.52Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVEMELERRTKFLNGLILKKKA EQQ+QPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain1.6e-5787.41Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        M+G EMELERR+KFLNGLILKKKAGEQQEQ    LNVRVRASDM+FPLQNRAF+ AR+LLDSMP KLD+KRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKV+ILLFKT+VEPLSR  SLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

A0A1S3CSY6 Dynein light chain1.6e-5787.41Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        M+G EMELERR+KFLNGLILKKKAGEQQEQ    LNVRVRASDM+FPLQNRAF+ AR+LLDSMP KLD+KRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKV+ILLFKT+VEPLSR  SLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

A0A6J1E6W8 Dynein light chain8.5e-6798.52Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVEMELERRTKFLNGLILKKKA E QEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

A0A6J1FHG9 Dynein light chain8.0e-5787.41Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEG EMELERRTKFLNGLILKKKAGE QE     LNVRVRASDM FPLQNRAF+ AR+LLDSMP KLD+KRLALALKKEFDSSYGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKV+ILLFKT+VEPLSR  SLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

A0A6J1JTB7 Dynein light chain1.2e-6596.3Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVEMELERRTKFLNGLILKKKA EQQ+QPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGT FGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD
        THSLGGFLYFSIDKV+ILLFKTSVEPL+RATSLKD
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSRATSLKD

SwissProt top hitse value%identityAlignment
O96860 Dynein light chain 2, cytoplasmic2.3e-1346.43Show/hide
Query:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT
        ++ +DMS  +Q  A   A Q L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT

Q22799 Dynein light chain 1, cytoplasmic1.8e-1346.43Show/hide
Query:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT
        ++ +DMS  +Q  A   A Q L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT

Q24117 Dynein light chain 1, cytoplasmic2.3e-1346.43Show/hide
Query:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT
        ++ +DMS  +Q  A   A Q L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT

Q3MHR3 Dynein light chain 2, cytoplasmic4.0e-1345.24Show/hide
Query:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT
        ++ +DMS  +Q  A   A Q ++    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT

Q96FJ2 Dynein light chain 2, cytoplasmic4.0e-1345.24Show/hide
Query:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT
        ++ +DMS  +Q  A   A Q ++    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKT

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein5.1e-4872.87Show/hide
Query:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV
        MEGVE+ELERR+KFLN LI KKKA EQQ+Q     NVRVRASDM  P QNRAF+ +R++L++ P K D KRLA ALKK+FDS+YGPAWHCIVGTSFGSYV
Subjt:  MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYV

Query:  THSLGGFLYFSIDKVHILLFKTSVEPLSR
        THS GGFLYF IDKV++LLFKT+VEPL +
Subjt:  THSLGGFLYFSIDKVHILLFKTSVEPLSR

AT1G52240.2 RHO guanyl-nucleotide exchange factor 116.3e-1442.05Show/hide
Query:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTSVEP
        V  SDM   +Q +A   A Q LD      D K +A  +KKEFD  YG  W C+VG++FG + THS G F+YF ++ +  L+FK +  P
Subjt:  VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTSVEP

AT4G15930.1 Dynein light chain type 1 family protein1.1e-1334.71Show/hide
Query:  RRTKFLNG------LILKKKAGEQQEQPHPPLNVR--VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        RR K +NG      ++  +++   + +  PP   R  ++++DM   +Q  A   A    +    + D   +A  +KKEFD  +G  WHCIVG +FGSYVT
Subjt:  RRTKFLNG------LILKKKAGEQQEQPHPPLNVR--VRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVHILLFKT
        H    F+YF +D+  +LLFK+
Subjt:  HSLGGFLYFSIDKVHILLFKT

AT4G27360.1 Dynein light chain type 1 family protein1.8e-1346.99Show/hide
Query:  SDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTSV
        +DM   ++  A + A + LD       T ++A  +KKEFD SYG  W CIVGT FGS+VTH  G F++FS+  + ILLFK SV
Subjt:  SDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTSV

AT5G20110.1 Dynein light chain type 1 family protein1.2e-2559.57Show/hide
Query:  LNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTSVEPLS
        L VR+ A+DM   +Q  AF  AR  LDS+  K  +K +A  LKKEFD  YGPAWHCIVG+SFGS+VTHS G F+YFS+DK+++LLFKT V P S
Subjt:  LNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTSVEPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGTGGAAATGGAGCTTGAGCGGCGTACTAAGTTTCTTAATGGCCTTATTTTGAAGAAGAAGGCGGGGGAGCAGCAAGAGCAGCCCCATCCTCCTCTTAATGT
TCGCGTCAGAGCCTCCGATATGTCATTTCCCTTGCAGAATCGGGCTTTTACCTCCGCTCGTCAACTCCTCGATTCCATGCCTGCCAAGCTCGATACCAAACGCCTTGCTC
TCGCCCTTAAAAAGGAATTCGATTCTTCCTATGGTCCTGCCTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTCTGGGTGGCTTCTTGTATTTT
TCAATAGATAAAGTTCACATCCTTCTCTTCAAAACGTCAGTCGAGCCCCTGTCGCGTGCAACCTCGTTAAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGTGGAAATGGAGCTTGAGCGGCGTACTAAGTTTCTTAATGGCCTTATTTTGAAGAAGAAGGCGGGGGAGCAGCAAGAGCAGCCCCATCCTCCTCTTAATGT
TCGCGTCAGAGCCTCCGATATGTCATTTCCCTTGCAGAATCGGGCTTTTACCTCCGCTCGTCAACTCCTCGATTCCATGCCTGCCAAGCTCGATACCAAACGCCTTGCTC
TCGCCCTTAAAAAGGAATTCGATTCTTCCTATGGTCCTGCCTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTCTGGGTGGCTTCTTGTATTTT
TCAATAGATAAAGTTCACATCCTTCTCTTCAAAACGTCAGTCGAGCCCCTGTCGCGTGCAACCTCGTTAAAAGATTGAGTTCCTCAATTCTAAATGAGGATTGAACAGCT
GCTGAAGTCATGAGCAAGAACAACCAGGTTCAGCCTACTACTCTTTTTGGTTGTATCATTGACTTTATCTTCTTTGAAAAAACAGAGTGTGAAGGTGATGTGAGTTATTA
TGAAATTTTGTAATGTGCAGTCCAACATCTAGGATTTCTGATGCTAAAAGATTTTATGTTTATGTTAACTTCTTGGTTTGAGGTAGTAAATAAAAAGCTTTGCTAC
Protein sequenceShow/hide protein sequence
MEGVEMELERRTKFLNGLILKKKAGEQQEQPHPPLNVRVRASDMSFPLQNRAFTSARQLLDSMPAKLDTKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYF
SIDKVHILLFKTSVEPLSRATSLKD