; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26068 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26068
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAD(P)H-quinone oxidoreductase subunit L, chloroplastic
Genome locationCarg_Chr04:16766232..16767572
RNA-Seq ExpressionCarg26068
SyntenyCarg26068
Gene Ontology termsGO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR019654 - NAD(P)H-quinone oxidoreductase subunit L


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601873.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.0e-83100Show/hide
Query:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
        FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
Subjt:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP

Query:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

KAG7032574.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-84100Show/hide
Query:  MMFQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLC
        MMFQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLC
Subjt:  MMFQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLC

Query:  FPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        FPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  FPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

XP_022953622.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita moschata]1.2e-8299.33Show/hide
Query:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
        FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
Subjt:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP

Query:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

XP_022953639.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X3 [Cucurbita moschata]1.2e-8299.33Show/hide
Query:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
        FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
Subjt:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP

Query:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

XP_022953647.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X4 [Cucurbita moschata]2.8e-8199.32Show/hide
Query:  VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI
        VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI
Subjt:  VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI

Query:  LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

TrEMBL top hitse value%identityAlignment
A0A6J1GNR4 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X15.6e-8399.33Show/hide
Query:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
        FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
Subjt:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP

Query:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

A0A6J1GNU1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X41.4e-8199.32Show/hide
Query:  VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI
        VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI
Subjt:  VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI

Query:  LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

A0A6J1GQ77 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X21.4e-8199.32Show/hide
Query:  VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI
        VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI
Subjt:  VVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGI

Query:  LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  LLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

A0A6J1GQ88 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X35.6e-8399.33Show/hide
Query:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
        FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
Subjt:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP

Query:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

A0A6J1JKK4 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X11.5e-8097.33Show/hide
Query:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
        FQVVA IREDPI FLRQKKTSLSLQFAALLATVAEPA AVTGDNNHEVPLTWIL QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP
Subjt:  FQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFP

Query:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
        GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW
Subjt:  GILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW

SwissProt top hitse value%identityAlignment
Q10W93 NAD(P)H-quinone oxidoreductase subunit L3.4e-0546.94Show/hide
Query:  YFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFR
        YFLV P I+  +L+ RWY  + +E    +  +FL FPG+L+ +PFLNFR
Subjt:  YFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFR

Q7U620 NAD(P)H-quinone oxidoreductase subunit L4.5e-0538.33Show/hide
Query:  ILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFR
        ++    ++G  Y LV P  +  W+  RW R   +E  + +  VFL FPG++++APFLNFR
Subjt:  ILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFR

Q7V897 NAD(P)H-quinone oxidoreductase subunit L3.4e-0538.33Show/hide
Query:  ILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFR
        +LA   ++G  Y +V P ++ +W+  RW+     E    +  VFL FPG++L+APFLN R
Subjt:  ILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFR

Q8DKZ3 NAD(P)H-quinone oxidoreductase subunit L3.4e-0540.62Show/hide
Query:  ILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPR
        +L   G +   Y LV P I+  +L  RWY  +  E    +  V   FPG+LL APF+NFR  PR
Subjt:  ILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPR

Q9CAC5 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic1.5e-4560.14Show/hide
Query:  IREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWA
        +R      L  KKT L+ Q  A+LAT+  PA A+TG NN +  L+ ++  +GI+  +YFLV PPIIMNWLR+RWYRR   EMY+QFM VF+ FPG+LLWA
Subjt:  IREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWA

Query:  PFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYD
        PFLNFRKFPRDP+MK PW  P +P  IKN YLKYP+A PEDYD
Subjt:  PFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYD

Arabidopsis top hitse value%identityAlignment
AT1G70760.1 inorganic carbon transport protein-related1.1e-4660.14Show/hide
Query:  IREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWA
        +R      L  KKT L+ Q  A+LAT+  PA A+TG NN +  L+ ++  +GI+  +YFLV PPIIMNWLR+RWYRR   EMY+QFM VF+ FPG+LLWA
Subjt:  IREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWA

Query:  PFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYD
        PFLNFRKFPRDP+MK PW  P +P  IKN YLKYP+A PEDYD
Subjt:  PFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTTCAGGTGGTGGCTTGCATCAGAGAAGACCCCATTGGCTTTCTTCGCCAAAAGAAAACCAGTTTGTCTCTTCAATTTGCTGCCCTTTTAGCCACTGTTGCGGA
GCCGGCAACTGCTGTAACAGGGGACAACAATCATGAGGTTCCACTGACATGGATTTTGGCACAATTAGGCATTGTTGGATTCTTTTACTTCCTTGTCTTTCCACCAATCA
TCATGAACTGGTTGAGGATAAGATGGTATAGAAGAAATTTGTTGGAAATGTATGTCCAATTCATGTGTGTCTTCCTTTGCTTCCCTGGCATTCTATTGTGGGCGCCATTT
CTGAACTTCAGAAAGTTCCCACGAGATCCATCGATGAAGTATCCATGGTCGACGCCCCAAGAGCCGTCTCAGATCAAAAATGGATACTTGAAGTACCCATTTGCCAAGCC
TGAAGATTACGACTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTTCAGGTGGTGGCTTGCATCAGAGAAGACCCCATTGGCTTTCTTCGCCAAAAGAAAACCAGTTTGTCTCTTCAATTTGCTGCCCTTTTAGCCACTGTTGCGGA
GCCGGCAACTGCTGTAACAGGGGACAACAATCATGAGGTTCCACTGACATGGATTTTGGCACAATTAGGCATTGTTGGATTCTTTTACTTCCTTGTCTTTCCACCAATCA
TCATGAACTGGTTGAGGATAAGATGGTATAGAAGAAATTTGTTGGAAATGTATGTCCAATTCATGTGTGTCTTCCTTTGCTTCCCTGGCATTCTATTGTGGGCGCCATTT
CTGAACTTCAGAAAGTTCCCACGAGATCCATCGATGAAGTATCCATGGTCGACGCCCCAAGAGCCGTCTCAGATCAAAAATGGATACTTGAAGTACCCATTTGCCAAGCC
TGAAGATTACGACTGGTAA
Protein sequenceShow/hide protein sequence
MMFQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPF
LNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW