; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c
Genome locationCarg_Chr06:4983795..4987304
RNA-Seq ExpressionCarg26075
SyntenyCarg26075
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR002327 - Cytochrome c, class IA/ IB
IPR009056 - Cytochrome c-like domain
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028432.1 hypothetical protein SDJN02_09613, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-59100Show/hide
Query:  MQRMETTEKTLRALSPQNLNNISFHTPWPSFDEGPSGNSKAGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MQRMETTEKTLRALSPQNLNNISFHTPWPSFDEGPSGNSKAGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MQRMETTEKTLRALSPQNLNNISFHTPWPSFDEGPSGNSKAGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

Query:  PQDRADLIAYLKEATA
        PQDRADLIAYLKEATA
Subjt:  PQDRADLIAYLKEATA

XP_022930036.1 cytochrome c [Cucurbita moschata]1.4e-3575.45Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

XP_022932892.1 cytochrome c [Cucurbita moschata]1.6e-3677.27Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

XP_022973349.1 cytochrome c-like [Cucurbita maxima]4.7e-3676.36Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGR+SGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

XP_038893188.1 cytochrome c [Benincasa hispida]8.1e-3666.92Show/hide
Query:  TLRALSPQNLNNISFHTPWPSFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKK
        TLR L+ ++  ++   T   SFDE P GNSKA                       GPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKK
Subjt:  TLRALSPQNLNNISFHTPWPSFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKK

Query:  YIPGTKMVFPGLKKPQDRADLIAYLKEATA
        YIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Subjt:  YIPGTKMVFPGLKKPQDRADLIAYLKEATA

TrEMBL top hitse value%identityAlignment
A0A1S3TS68 cytochrome c1.1e-3574.55Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSK+                       GPNLNGLFGRQSGTTAGYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

A0A6J1EPS9 cytochrome c6.7e-3675.45Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

A0A6J1EY20 cytochrome c7.9e-3777.27Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

A0A6J1IEB6 cytochrome c-like2.3e-3676.36Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGR+SGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

A0A6J1JWC5 cytochrome c6.7e-3675.45Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

SwissProt top hitse value%identityAlignment
P00051 Cytochrome c4.0e-3875.45Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTT GYSYSAANKN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

P00052 Cytochrome c3.1e-3874.55Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSK+                       GPNLNGLFGRQSGTTAGYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

P00053 Cytochrome c2.6e-3769.09Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SF++ P G+SKA                       GPNLNGLFGRQSGTTAGYSYSAANKNMAV W++KTLYDYLLNPKKYIPGTKMVFPGLKKP++RAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

P62772 Cytochrome c6.9e-3875.45Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTTAGYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

P62773 Cytochrome c6.9e-3875.45Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GNSKA                       GPNLNGLFGRQSGTTAGYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKEATA
Subjt:  LIAYLKEATA

Arabidopsis top hitse value%identityAlignment
AT1G22840.1 CYTOCHROME C-19.2e-3872.73Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GN+KA                       GPNLNGLFGRQSGTTAGYSYSAANKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE+TA
Subjt:  LIAYLKEATA

AT1G22840.2 CYTOCHROME C-16.6e-2062.2Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI
        SFDE P GN+KA                       GPNLNGLFGRQSGTTAGYSYSAANKN AV WEEK LYDYLLNPKK +
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI

AT4G10040.1 cytochrome c-21.6e-3772.73Show/hide
Query:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
        SFDE P GN KA                       GPNLNGLFGRQSGTT GYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD
Subjt:  SFDEGPSGNSKA-----------------------GPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRAD

Query:  LIAYLKEATA
        LIAYLKE TA
Subjt:  LIAYLKEATA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGTATGGAGACCACGGAGAAAACATTGCGAGCCCTAAGCCCTCAGAATCTGAACAACATCTCATTCCATACGCCATGGCCAAGCTTTGACGAAGGCCCCTCCGG
CAATTCCAAAGCTGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAG
AAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTAT
CTGAAGGAAGCAACTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCGTATGGAGACCACGGAGAAAACATTGCGAGCCCTAAGCCCTCAGAATCTGAACAACATCTCATTCCATACGCCATGGCCAAGCTTTGACGAAGGCCCCTCCGG
CAATTCCAAAGCTGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAG
AAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTAT
CTGAAGGAAGCAACTGCTTAATTGCATAATATATGGTTGATGCTTCTTCCAATCTACAATTTTTTGCTATCAGTTTTCCCCATCATCGTTAAAATAAGAACATTGAGAGG
AGAGGAACCTTAGATGAAAAGTTGGAGGTGGTCACACACACAGACTTTTTTTTTTTTCTTTTTCATTAAAAAATTCTTACTTCCCTTCCTTCGCTACACTCATTTGCAGA
GTTCACCCCATTTGTAGCTTACATTATTGTTATGTGAACATAACTGCTACAATTTTTTTGGCCAACCCGGTTCTGCCAACTTATTTTCTCATAATAAATGTCACGCTTGT
TAGAGACT
Protein sequenceShow/hide protein sequence
MQRMETTEKTLRALSPQNLNNISFHTPWPSFDEGPSGNSKAGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
LKEATA