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Carg26147 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26147
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand
Genome locationCarg_Chr12:3341263..3341541
RNA-Seq ExpressionCarg26147
SyntenyCarg26147
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3482.61Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC
        MGN+KS  YKRVLVP TEEQLA IFKSHDRDGDGKL+KEELKQAFNYLGSRFSSFR  EALRAAD +GDG I+M EM+KLI+YTK RKYTLC
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC

KAG6585663.1 hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia]7.3e-4093.48Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC
        MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTK    ++C
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]7.1e-3581.52Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC
        MGN+KS  YKRVLVPF+EEQLA++FK+HD DGDGKL+KEELKQAF+YLGSRFSSFRV+EALRAADT+GDGFISM EM KLI+Y K RKYTLC
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-40100Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG
        MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-44100Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC
        MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein4.2e-1768.57Show/hide
Query:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG
        +EEQLA IFK HD D D KL+KEEL +AFNYLGSR+++ RVKEA+RA D N DG IS+DEM+KLI Y KG
Subjt:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG

A0A0A0LRB6 Uncharacterized protein1.4e-3380.22Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL
        MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDG L+KEELKQAF YLGSRF +FRV+EALRAADTNGDG ISMDEM KLIKY K RKYT+
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL

A0A2N9FYQ0 Uncharacterized protein1.3e-1851.72Show/hide
Query:  KSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL
        K  ++KR  +PFTEEQL  IFKSHD DGDGKLS++E+K+AF YLGSR+ ++R  +A+  AD + DG+I  +E+ KL++Y     YT+
Subjt:  KSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein2.9e-3481.32Show/hide
Query:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL
        MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDG L+KEELKQAF YLGSRFS+FRV+EALRAADTNGDG ISMDEM KLIKY K RKYT+
Subjt:  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL

A0A7N2KRS3 Uncharacterized protein1.5e-1956.32Show/hide
Query:  KSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL
        K+  +KR  VPF E+QL  IFKSHD DGDGKLS++ELK AF YLGSR+ ++R  +ALR AD N DG+I+ DE+ KL++Y     YT+
Subjt:  KSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTL

SwissProt top hitse value%identityAlignment
O96102 Calmodulin3.8e-0740Show/hide
Query:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        TEE++   FK  D+DG+G +S  EL+     LG + S   V E +R AD +GDG ++ DE  K++
Subjt:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

P05933 Calmodulin2.9e-0740.62Show/hide
Query:  EEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        EE++   FK  D+DG+G ++ EEL      LG R S   V + +R ADT+GDG I+ +E +++I
Subjt:  EEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

P24044 Calmodulin1.0e-0741.54Show/hide
Query:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        TEE+L   F+  DRDGDG +S +EL+     LG + ++  V E +R AD +GDG I+ +E  K++
Subjt:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

P27166 Calmodulin3.8e-0740Show/hide
Query:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        TEE+L   FK  DRDG+G +S  EL+     LG + +   V E +R AD +GDG I+ +E  +++
Subjt:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

P62203 Calmodulin1.0e-0741.54Show/hide
Query:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        TEE+L   F+  DRDGDG +S +EL+     LG + ++  V E +R AD +GDG I+ +E  K++
Subjt:  TEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family7.9e-0842.65Show/hide
Query:  VPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        V    EQL  IFKS DRDG+G +S  EL  A   +G   +   + E ++ ADTNGDG IS  E   ++
Subjt:  VPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

AT1G76650.1 calmodulin-like 386.0e-0839.68Show/hide
Query:  QLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIK
        +L A+F   D + DG++S EEL+++F  LG + S      A+R +DT+GDG +  +E ++LIK
Subjt:  QLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIK

AT1G76650.3 calmodulin-like 386.0e-0839.68Show/hide
Query:  QLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIK
        +L A+F   D + DG++S EEL+++F  LG + S      A+R +DT+GDG +  +E ++LIK
Subjt:  QLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIK

AT3G51920.1 calmodulin 93.0e-0734.92Show/hide
Query:  EQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI
        ++L  +F+  DRDGDG +S+ EL +    +G + ++   +  +R AD +GDGF+S  E +K++
Subjt:  EQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLI

AT5G42380.1 calmodulin like 376.0e-0838.81Show/hide
Query:  QLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG
        +L  +F   D + DGK+S EEL+   + LG   SS  V+E ++ +D +GDGFI  +E  KL++   G
Subjt:  QLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATGCCAAAAGTACAAATTACAAACGAGTTTTGGTTCCCTTCACGGAGGAGCAACTAGCCGCCATTTTCAAAAGCCACGACCGAGATGGTGATGGGAAGCTGTC
AAAGGAGGAGTTGAAGCAAGCCTTCAACTATCTTGGCTCGCGCTTTAGCTCCTTTAGAGTCAAAGAAGCCCTACGTGCTGCGGATACGAACGGTGATGGTTTCATCAGCA
TGGACGAGATGAATAAGCTTATTAAATATACTAAAGGTCGTAAATACACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATGCCAAAAGTACAAATTACAAACGAGTTTTGGTTCCCTTCACGGAGGAGCAACTAGCCGCCATTTTCAAAAGCCACGACCGAGATGGTGATGGGAAGCTGTC
AAAGGAGGAGTTGAAGCAAGCCTTCAACTATCTTGGCTCGCGCTTTAGCTCCTTTAGAGTCAAAGAAGCCCTACGTGCTGCGGATACGAACGGTGATGGTTTCATCAGCA
TGGACGAGATGAATAAGCTTATTAAATATACTAAAGGTCGTAAATACACTCTTTGTTAA
Protein sequenceShow/hide protein sequence
MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEALRAADTNGDGFISMDEMNKLIKYTKGRKYTLC