| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN69607.1 hypothetical protein VITISV_009561 [Vitis vinifera] | 6.5e-180 | 53.35 | Show/hide |
Query: AKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFKT
AK+H+LPYSRNEHRSSHVLDLIHCDLWGPSP+KSNS FLYYVIFID+ KV QSDG EFT+TCFK
Subjt: AKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFKT
Query: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFS--------TTAYIINRLPTPLLGAFSPQH-------PLYFLGVIVLL
HL SGI+HQLS PYTPAQNGRAERK+RHV E GLALLFHSH+SPRFW DA + +T++ I P LG +SP H P I
Subjt: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFS--------TTAYIINRLPTPLLGAFSPQH-------PLYFLGVIVLL
Query: IKGSANHILII--------------------LIH----PP--TTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLG
+ H + L H PP T S HIPRS+SSPC S+LPP S+ SIE VD SSSLG
Subjt: IKGSANHILII--------------------LIH----PP--TTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLG
Query: THPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQ--------------------------------LSQKYSNLQLRILLGL----------LPWMK
+HPMITRAK GIFK RHP NLG+ G SGLL A LAS L + N +R+ L L +
Subjt: THPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQ--------------------------------LSQKYSNLQLRILLGL----------LPWMK
Query: KFERYNKMILGLWFLALPTPTSWA----------LNGC-----------------FVLNICLMDPSSV----------------------------SSLV
F K L+L W LNG F ++CL+ + +SL
Subjt: KFERYNKMILGLWFLALPTPTSWA----------LNGC-----------------FVLNICLMDPSSV----------------------------SSLV
Query: LLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGS
+ +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHSEFATKDLGSLSYFLGLEASPTPDGLFI QLKYARDILT QLLDSKPVHTPMVVSQHLT G
Subjt: LLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGS
Query: PFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGN
PFS+PTLYRSLVG LQYL ITR DIA+AVNSVSQFL+APT+DHFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGN
Subjt: PFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGN
Query: NLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPI
NLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDL VPI
Subjt: NLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPI
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| CAN73071.1 hypothetical protein VITISV_032383 [Vitis vinifera] | 1.7e-183 | 54.34 | Show/hide |
Query: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
+AK+H+LPYSRNEHRSSHVLDLIHCDLWGPSP+KSNSGFLYYVIFID+ KV QSDGG EFT+TCFK
Subjt: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
Query: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQH-PLYFLGVIVLLIKGSANHILIILI
HLR SGI+HQLSCPYT AQNGRAERK+RHV E GLALLFH HLSPRFWV+ F QH LY V S + LI+L
Subjt: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQH-PLYFLGVIVLLIKGSANHILIILI
Query: HPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS---
L G +LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLL ALL+S
Subjt: HPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS---
Query: --------------QLSQKYSNLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPT
+ ++ LQ L+P W+ + ER ++ + L+L
Subjt: --------------QLSQKYSNLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPT
Query: SWA----------LNGC-----------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVT
W LNG F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVT
Subjt: SWA----------LNGC-----------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVT
Query: GNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTIT
GNN SL+DSFT KLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTIT
Subjt: GNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTIT
Query: RPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE
RPDIA+AVNSVSQFL+APT+DHFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE
Subjt: RPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE
Query: YRALATTTAELLWVTHLLHDLKVPI
YRALA T AELLW+THLLHDLKVPI
Subjt: YRALATTTAELLWVTHLLHDLKVPI
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| KAG7032431.1 putative mitochondrial protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | 0.0e+00 | 100 | Show/hide |
Query: MDGRSSQTFSGFRVDFGARSTALWSGNDKLLVEDTSGLKQVTMVDSLGLRASIGLYTVAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYV
MDGRSSQTFSGFRVDFGARSTALWSGNDKLLVEDTSGLKQVTMVDSLGLRASIGLYTVAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYV
Subjt: MDGRSSQTFSGFRVDFGARSTALWSGNDKLLVEDTSGLKQVTMVDSLGLRASIGLYTVAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYV
Query: IFIDEKVSQSDGGTEFTSTCFKTHLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
IFIDEKVSQSDGGTEFTSTCFKTHLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
Subjt: IFIDEKVSQSDGGTEFTSTCFKTHLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
Query: FLGVIVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVDSSSLGTHPMITRAKTGIFKPRHPA
FLGVIVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVDSSSLGTHPMITRAKTGIFKPRHPA
Subjt: FLGVIVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVDSSSLGTHPMITRAKTGIFKPRHPA
Query: NLGMFGSSGLLFALLASQLSQKYSNLQLRILLGLLPWMKKFERYNKMILGLWFLALPTPTSWALNGCFVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVD
NLGMFGSSGLLFALLASQLSQKYSNLQLRILLGLLPWMKKFERYNKMILGLWFLALPTPTSWALNGCFVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVD
Subjt: NLGMFGSSGLLFALLASQLSQKYSNLQLRILLGLLPWMKKFERYNKMILGLWFLALPTPTSWALNGCFVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVD
Query: DIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQ
DIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQ
Subjt: DIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQ
Query: YLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRS
YLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRS
Subjt: YLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRS
Query: SCESEYRALATTTAELLWVTHLLHDLKVPIS
SCESEYRALATTTAELLWVTHLLHDLKVPIS
Subjt: SCESEYRALATTTAELLWVTHLLHDLKVPIS
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| RVW43615.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.8e-175 | 54.55 | Show/hide |
Query: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY-----------------------
HLR SGI+HQLSCPYTPAQNGRAERK+RHV E GLALLFHSHLSPRFWVDAFST YIINRLPTPLLG SP LY
Subjt: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY-----------------------
Query: -------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDIC
FLG I ++ +HI PP+ SS HIPRS+SSPC+IC
Subjt: -------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDIC
Query: SDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS-----------------QLSQKYS
SDLVDE V+VDTSLAGS+LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLL ALLAS + ++
Subjt: SDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS-----------------QLSQKYS
Query: NLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPTSWA----------LNGC----
LQ L+P W+ + ER ++ + L+L W LNG
Subjt: NLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPTSWA----------LNGC----
Query: -------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATK
F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHSEFATK
Subjt: -------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATK
Query: DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVD
DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL+APT+D
Subjt: DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVD
Query: HFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
HFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTV RSSCESEYRALA T AELLW+THLLHDL
Subjt: HFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
Query: KVPI
KVPI
Subjt: KVPI
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| RVW45095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 9.6e-208 | 54.53 | Show/hide |
Query: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
+AK+H+LPYSRNEHRSSHVLDLIHCDLWGPSP+KSNSGFLYYVIFID+ KV QSDGG EFT+TCFK
Subjt: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
Query: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY----------------------
HLR SGI+HQLSCPYTPAQNGRAERK+RHV E GLALLFHSHLSPRFWVDAFSTT YIINRLPTPLLG SP LY
Subjt: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY----------------------
Query: --------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDI
FLG I ++ +HI PP+ SS HIPRS+SSPC+I
Subjt: --------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDI
Query: CSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQLSQKYSNL------------QL
CSDLVDE V+VDTSLAGS+LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLL ALLAS + + + ++
Subjt: CSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQLSQKYSNL------------QL
Query: RILLGLLPWMKKFERYNKMILG-LW-----------------------------------------------FLALPTPTSWA----------LNGC---
+ L W+ N I+G W L+L W LNG
Subjt: RILLGLLPWMKKFERYNKMILG-LW-----------------------------------------------FLALPTPTSWA----------LNGC---
Query: --------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFAT
F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHS+FAT
Subjt: --------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFAT
Query: KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTV
KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRA LLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL+A T+
Subjt: KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTV
Query: DHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHD
DHFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHD
Subjt: DHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHD
Query: LKVPI
LKVPI
Subjt: LKVPI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438E275 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-175 | 54.4 | Show/hide |
Query: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY-----------------------
HLR SGI+HQLSCPYTPAQNGRAERK+RHV E GLALLFHSHLSPRFWVDAFST YIIN LPTPLLG SP LY
Subjt: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY-----------------------
Query: -------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDIC
FLG I ++ +HI PP+ SS HIPRS+SSPC+IC
Subjt: -------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDIC
Query: SDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS-----------------QLSQKYS
SDLVDE V+VDTSLAG +LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLLFALLAS + ++
Subjt: SDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS-----------------QLSQKYS
Query: NLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPTSWA----------LNGC----
LQ L+P W+ + ER ++ + L+L W LNG
Subjt: NLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPTSWA----------LNGC----
Query: -------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATK
F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHSEFATK
Subjt: -------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATK
Query: DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVD
DLGSL+YFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL+APT+D
Subjt: DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVD
Query: HFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
HFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDL
Subjt: HFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
Query: KVPI
KVPI
Subjt: KVPI
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| A0A438E763 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-175 | 54.55 | Show/hide |
Query: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY-----------------------
HLR SGI+HQLSCPYTPAQNGRAERK+RHV E GLALLFHSHLSPRFWVDAFST YIINRLPTPLLG SP LY
Subjt: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY-----------------------
Query: -------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDIC
FLG I ++ +HI PP+ SS HIPRS+SSPC+IC
Subjt: -------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDIC
Query: SDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS-----------------QLSQKYS
SDLVDE V+VDTSLAGS+LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLL ALLAS + ++
Subjt: SDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS-----------------QLSQKYS
Query: NLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPTSWA----------LNGC----
LQ L+P W+ + ER ++ + L+L W LNG
Subjt: NLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPTSWA----------LNGC----
Query: -------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATK
F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHSEFATK
Subjt: -------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATK
Query: DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVD
DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL+APT+D
Subjt: DLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVD
Query: HFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
HFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTV RSSCESEYRALA T AELLW+THLLHDL
Subjt: HFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
Query: KVPI
KVPI
Subjt: KVPI
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| A0A438EBA0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-208 | 54.53 | Show/hide |
Query: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
+AK+H+LPYSRNEHRSSHVLDLIHCDLWGPSP+KSNSGFLYYVIFID+ KV QSDGG EFT+TCFK
Subjt: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
Query: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY----------------------
HLR SGI+HQLSCPYTPAQNGRAERK+RHV E GLALLFHSHLSPRFWVDAFSTT YIINRLPTPLLG SP LY
Subjt: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY----------------------
Query: --------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDI
FLG I ++ +HI PP+ SS HIPRS+SSPC+I
Subjt: --------------FLGV---------------------------------------------IVLLIKGSANHILIILIHPPTTSSLHIPRSSSSPCDI
Query: CSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQLSQKYSNL------------QL
CSDLVDE V+VDTSLAGS+LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLL ALLAS + + + ++
Subjt: CSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQLSQKYSNL------------QL
Query: RILLGLLPWMKKFERYNKMILG-LW-----------------------------------------------FLALPTPTSWA----------LNGC---
+ L W+ N I+G W L+L W LNG
Subjt: RILLGLLPWMKKFERYNKMILG-LW-----------------------------------------------FLALPTPTSWA----------LNGC---
Query: --------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFAT
F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHS+FAT
Subjt: --------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFAT
Query: KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTV
KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRA LLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL+A T+
Subjt: KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTV
Query: DHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHD
DHFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHD
Subjt: DHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHD
Query: LKVPI
LKVPI
Subjt: LKVPI
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| A5B2A6 Integrase catalytic domain-containing protein | 3.1e-180 | 53.35 | Show/hide |
Query: AKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFKT
AK+H+LPYSRNEHRSSHVLDLIHCDLWGPSP+KSNS FLYYVIFID+ KV QSDG EFT+TCFK
Subjt: AKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFKT
Query: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFS--------TTAYIINRLPTPLLGAFSPQH-------PLYFLGVIVLL
HL SGI+HQLS PYTPAQNGRAERK+RHV E GLALLFHSH+SPRFW DA + +T++ I P LG +SP H P I
Subjt: HLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFS--------TTAYIINRLPTPLLGAFSPQH-------PLYFLGVIVLL
Query: IKGSANHILII--------------------LIH----PP--TTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLG
+ H + L H PP T S HIPRS+SSPC S+LPP S+ SIE VD SSSLG
Subjt: IKGSANHILII--------------------LIH----PP--TTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLG
Query: THPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQ--------------------------------LSQKYSNLQLRILLGL----------LPWMK
+HPMITRAK GIFK RHP NLG+ G SGLL A LAS L + N +R+ L L +
Subjt: THPMITRAKTGIFKPRHPANLGMFGSSGLLFALLASQ--------------------------------LSQKYSNLQLRILLGL----------LPWMK
Query: KFERYNKMILGLWFLALPTPTSWA----------LNGC-----------------FVLNICLMDPSSV----------------------------SSLV
F K L+L W LNG F ++CL+ + +SL
Subjt: KFERYNKMILGLWFLALPTPTSWA----------LNGC-----------------FVLNICLMDPSSV----------------------------SSLV
Query: LLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGS
+ +QS+LIYLLLYVDDIIVTGNN SL+DSFT KLHSEFATKDLGSLSYFLGLEASPTPDGLFI QLKYARDILT QLLDSKPVHTPMVVSQHLT G
Subjt: LLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGS
Query: PFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGN
PFS+PTLYRSLVG LQYL ITR DIA+AVNSVSQFL+APT+DHFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGN
Subjt: PFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGN
Query: NLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPI
NLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDL VPI
Subjt: NLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPI
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| A5C5R8 Integrase catalytic domain-containing protein | 8.0e-184 | 54.34 | Show/hide |
Query: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
+AK+H+LPYSRNEHRSSHVLDLIHCDLWGPSP+KSNSGFLYYVIFID+ KV QSDGG EFT+TCFK
Subjt: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFK
Query: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQH-PLYFLGVIVLLIKGSANHILIILI
HLR SGI+HQLSCPYT AQNGRAERK+RHV E GLALLFH HLSPRFWV+ F QH LY V S + LI+L
Subjt: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQH-PLYFLGVIVLLIKGSANHILIILI
Query: HPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS---
L G +LPP S+ SIE D SSSLG+HPMITRAK GIFK RHPANLG+ GSSGLL ALL+S
Subjt: HPPTTSSLHIPRSSSSPCDICSDLVDEFVEVDTSLAGSTLPPSTSNSTSIEPTVD-SSSLGTHPMITRAKTGIFKPRHPANLGMFGSSGLLFALLAS---
Query: --------------QLSQKYSNLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPT
+ ++ LQ L+P W+ + ER ++ + L+L
Subjt: --------------QLSQKYSNLQLRILLGLLP-----------WMKK--------FERYNKMILGLWF------------------------LALPTPT
Query: SWA----------LNGC-----------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVT
W LNG F ++CL+ + + +SL + +QS+LIYLLLYVDDIIVT
Subjt: SWA----------LNGC-----------------FVLNICLMDPS----------------------------SVSSLVLLPKQSNLIYLLLYVDDIIVT
Query: GNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTIT
GNN SL+DSFT KLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT GSPFS+PTLYRSLVGALQYLTIT
Subjt: GNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTIT
Query: RPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE
RPDIA+AVNSVSQFL+APT+DHFLAVKRI RYVKGTLHFGLTF PST+PS LVAY D DWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE
Subjt: RPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE
Query: YRALATTTAELLWVTHLLHDLKVPI
YRALA T AELLW+THLLHDLKVPI
Subjt: YRALATTTAELLWVTHLLHDLKVPI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.5e-33 | 31 | Show/hide |
Query: RYNKMILGL------WFLALPTPTSWALNGCFVLNICLMDPSSVSSLVLLPKQSNL---IYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSY
+ NK I GL WF AL C +N SSV + + + N+ IY+LLYVDD+++ + + +++F L +F DL + +
Subjt: RYNKMILGL------WFLALPTPTSWALNGCFVLNICLMDPSSVSSLVLLPKQSNL---IYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSY
Query: FLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAYAVNSVSQFLNAPTVDHFLAVK
F+G+ D +++SQ Y + IL++ + + V TP+ + S T RSL+G L Y+ + TRPD+ AVN +S++ + + + +K
Subjt: FLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAYAVNSVSQFLNAPTVDHFLAVK
Query: RIFRYVKGTLHFGLTFHPS-TVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGN-NLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPI
R+ RY+KGT+ L F + + ++ Y+D+DWAG R+ST+GY + + NL+ W+ K+Q +V+ SS E+EY AL E LW+ LL + + +
Subjt: RIFRYVKGTLHFGLTFHPS-TVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGN-NLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.5e-33 | 37.1 | Show/hide |
Query: QSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPF
++N I LLLYVDD+++ G + LI L F KDLG LG++ T L++SQ KY +L R + ++KPV TP+ L+ P
Subjt: QSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPF
Query: S-------DPTLYRSLVGALQY-LTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGY
+ Y S VG+L Y + TRPDIA+AV VS+FL P +H+ AVK I RY++GT L F S +L Y D D AG D R+S++GY
Subjt: S-------DPTLYRSLVGALQY-LTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGY
Query: SIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
+SW +K Q V+ S+ E+EY A T E++W+ L +L
Subjt: SIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-14 | 29.07 | Show/hide |
Query: KSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFKTH
K H++ + + R ++LDL++ D+ GP ++S G Y+V FID+ K +SD G E+TS F+ +
Subjt: KSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDE-----------------------------------KVSQSDGGTEFTSTCFKTH
Query: LRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQ
+ GI H+ + P TP NG AER R + E ++L + L FW +A T Y+INR P+ L P+
Subjt: LRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQ
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.8e-63 | 52.65 | Show/hide |
Query: IYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
+YLLLYVDDI++TG++++L++ +L S F+ KDLG + YFLG++ P GLF+SQ KYA IL A +LD KP+ TP+ + + + + + DP+ +
Subjt: IYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
Query: RSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAK
RS+VGALQYLT+TRPDI+YAVN V Q ++ PT+ F +KR+ RYVKGT+ GL H ++ + + A+ D+DWAGC TRRST+G+ +LG N++SWSAK
Subjt: RSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAK
Query: KQPTVSRSSCESEYRALATTTAELLW
+QPTVSRSS E+EYRALA T AEL W
Subjt: KQPTVSRSSCESEYRALATTTAELLW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-59 | 44.91 | Show/hide |
Query: FVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSK
++L I ++ S +SL +L + +++Y+L+YVDDI++TGN+ +L+ + L F+ KD L YFLG+EA P GL +SQ +Y D+L R ++ +K
Subjt: FVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSK
Query: PVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWA
PV TPM S L+ G+ +DPT YR +VG+LQYL TRPDI+YAVN +SQF++ PT +H A+KRI RY+ GT + G+ S L AY D DWA
Subjt: PVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWA
Query: GCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPIS
G D ST+GY +YLG++ +SWS+KKQ V RSS E+EYR++A T++E+ W+ LL +L + ++
Subjt: GCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPIS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.4e-20 | 34.27 | Show/hide |
Query: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFID-----------EKVSQ------------------------SDGGTEFTSTCFK
+ KS+++P+S++ S+ L+ I+ D+W SP+ S+ + YYVIF+D ++ SQ SD G EF +
Subjt: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFID-----------EKVSQ------------------------SDGGTEFTSTCFK
Query: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
+ GI H S P+TP NG +ERK+RH+ E GL LL H+ + +W AF+ Y+INRLPTPLL SP L+
Subjt: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.3e-60 | 43.64 | Show/hide |
Query: RYNKMILGLWFLALPTPTSWALN-GCFVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASP
R K I GL P +W + ++L + ++ S +SL +L + ++IY+L+YVDDI++TGN++ L+ L F+ K+ L YFLG+EA
Subjt: RYNKMILGLWFLALPTPTSWALN-GCFVLNICLMDPSSVSSLVLLPKQSNLIYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASP
Query: TPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKG
P GL +SQ +Y D+L R +L +KPV TPM S LT G+ DPT YR +VG+LQYL TRPD++YAVN +SQ+++ PT DH+ A+KR+ RY+ G
Subjt: TPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKG
Query: TLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPIS
T G+ S L AY D DWAG D ST+GY +YLG++ +SWS+KKQ V RSS E+EYR++A T++EL W+ LL +L + +S
Subjt: TLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPIS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.5e-22 | 36.52 | Show/hide |
Query: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFID-----------EKVSQ------------------------SDGGTEFTSTCFK
+ KSH++P+S + SS L+ I+ D+W SP+ S + YYVIF+D ++ SQ SD G EF +
Subjt: VAKSHQLPYSRNEHRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFID-----------EKVSQ------------------------SDGGTEFTSTCFK
Query: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
+L GI H S P+TP NG +ERK+RH+ E+GL LL H+ + +W AFS Y+INRLPTPLL SP L+
Subjt: THLRNSGIYHQLSCPYTPAQNGRAERKYRHVNEIGLALLFHSHLSPRFWVDAFSTTAYIINRLPTPLLGAFSPQHPLY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.5e-53 | 45.8 | Show/hide |
Query: LLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYR
+L+YVDDII+ NN + +D +L S F +DLG L YFLGLE + + G+ I Q KYA D+L LL KP PM S +A G F D YR
Subjt: LLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYR
Query: SLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKK
L+G L YL ITR DI++AVN +SQF AP + H AV +I Y+KGT+ GL F+ S L + D + C DTRRST+GY ++LG +L+SW +KK
Subjt: SLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAKK
Query: QPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPIS
Q VS+SS E+EYRAL+ T E++W+ +L++P+S
Subjt: QPTVSRSSCESEYRALATTTAELLWVTHLLHDLKVPIS
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 8.3e-16 | 51.28 | Show/hide |
Query: YLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGY
YLTITRPD+ +AVN +SQF +A AV ++ YVKGT+ GL F+ +T L A+ D+DWA CPDTRRS +G+
Subjt: YLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.3e-64 | 52.65 | Show/hide |
Query: IYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
+YLLLYVDDI++TG++++L++ +L S F+ KDLG + YFLG++ P GLF+SQ KYA IL A +LD KP+ TP+ + + + + + DP+ +
Subjt: IYLLLYVDDIIVTGNNSSLIDSFTLKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
Query: RSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAK
RS+VGALQYLT+TRPDI+YAVN V Q ++ PT+ F +KR+ RYVKGT+ GL H ++ + + A+ D+DWAGC TRRST+G+ +LG N++SWSAK
Subjt: RSLVGALQYLTITRPDIAYAVNSVSQFLNAPTVDHFLAVKRIFRYVKGTLHFGLTFHPSTVPSMLVAYLDTDWAGCPDTRRSTSGYSIYLGNNLVSWSAK
Query: KQPTVSRSSCESEYRALATTTAELLW
+QPTVSRSS E+EYRALA T AEL W
Subjt: KQPTVSRSSCESEYRALATTTAELLW
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