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Carg26170 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26170
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:11341387..11343173
RNA-Seq ExpressionCarg26170
SyntenyCarg26170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601663.1 hypothetical protein SDJN03_06896, partial [Cucurbita argyrosperma subsp. sororia]2.5e-58100Show/hide
Query:  KVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIALQRRILPTIRRVPFA
        KVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIALQRRILPTIRRVPFA
Subjt:  KVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIALQRRILPTIRRVPFA

Query:  LRREQIPGTNSNVSKLAGST
        LRREQIPGTNSNVSKLAGST
Subjt:  LRREQIPGTNSNVSKLAGST
KAG7032433.1 hypothetical protein SDJN02_06478, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-76100Show/hide
Query:  MRGYYHFIKSDMVEGKVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIA
        MRGYYHFIKSDMVEGKVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIA
Subjt:  MRGYYHFIKSDMVEGKVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIA

Query:  LQRRILPTIRRVPFALRREQIPGTNSNVSKLAGSTYLLASEFQQQPTP
        LQRRILPTIRRVPFALRREQIPGTNSNVSKLAGSTYLLASEFQQQPTP
Subjt:  LQRRILPTIRRVPFALRREQIPGTNSNVSKLAGSTYLLASEFQQQPTP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGATACTATCATTTCATTAAAAGTGACATGGTTGAAGGAAAAGTAAGGAAACCTGATTCCCCAATTTCACTCCCCGTCCCTACTCAGTCGCTTTCTTCTTCTTT
GGTGAGCCTTCCACCGGCGGCGTTTGTCGAGCAGCACAACCCACGAGCTCTAGTTCTACGCGACGGAGGTAACCTGCGGCGACAGCACCTACACTCCGACAAGCAGATCC
TCACAACCTCGACGGCGTCTTGTTGTGCGCGACGACACCCACGCCGCGGCAGCAACCTTAACGTCCAGACTTCTATTGCTCTGCAGCGACGCATCTTGCCGACGATTCGT
AGAGTTCCATTTGCTCTACGGCGCGAGCAGATTCCAGGCACGAATAGTAACGTCTCTAAACTCGCGGGTTCGACGTATTTATTAGCGAGCGAATTTCAGCAGCAACCTAC
TCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGATACTATCATTTCATTAAAAGTGACATGGTTGAAGGAAAAGTAAGGAAACCTGATTCCCCAATTTCACTCCCCGTCCCTACTCAGTCGCTTTCTTCTTCTTT
GGTGAGCCTTCCACCGGCGGCGTTTGTCGAGCAGCACAACCCACGAGCTCTAGTTCTACGCGACGGAGGTAACCTGCGGCGACAGCACCTACACTCCGACAAGCAGATCC
TCACAACCTCGACGGCGTCTTGTTGTGCGCGACGACACCCACGCCGCGGCAGCAACCTTAACGTCCAGACTTCTATTGCTCTGCAGCGACGCATCTTGCCGACGATTCGT
AGAGTTCCATTTGCTCTACGGCGCGAGCAGATTCCAGGCACGAATAGTAACGTCTCTAAACTCGCGGGTTCGACGTATTTATTAGCGAGCGAATTTCAGCAGCAACCTAC
TCCTTAATTGATTTTGATTCAGTTTTCTTGTATCACGTAGAAATCAGATTTGCGATTTTGAACTTGATCACGTTCCAGCAAAGATTTTAGTCCTTATTGGTTCTTACTAG
TTTCGGACTCCTTCGAACACATTTCAGCAAAGACCCAAGCTCTTTTTGATTTAGACTTCATTCGGAGTGTTCGAACTAAGGTATAAGGTCATATTTGGTAAGGGCGCCCC
TCTAGAATACTCTTTCAGTTTGAATAAGGATTTTGAACTAATGCGTGCGTCCAAGTATTTCTTTTTGTTTAGGACCCCTTTGAATTAATATAGGAGCACTTTAGGCAGTA
TGTGCTTTGGATGGTTAATCATGCTCGAATGTTGTGATGACTAACATGCTGGGAAGCCGTTGAAGATTTTATGTTTATAAGCCGTGGAGAATGTCTAATTATGCATATGA
TTTCAGTTGAGGACGTTTTGTTGTTCATGTGAGAAAAAGGTTAGAGTACTATGTGC
Protein sequenceShow/hide protein sequence
MRGYYHFIKSDMVEGKVRKPDSPISLPVPTQSLSSSLVSLPPAAFVEQHNPRALVLRDGGNLRRQHLHSDKQILTTSTASCCARRHPRRGSNLNVQTSIALQRRILPTIR
RVPFALRREQIPGTNSNVSKLAGSTYLLASEFQQQPTP