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Carg26178 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26178
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:11519702..11529489
RNA-Seq ExpressionCarg26178
SyntenyCarg26178
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032441.1 hypothetical protein SDJN02_06486, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-145100Show/hide
Query:  MHLRIHSGIFLGIIPTIQPIMDFDTILNEEFCLIECTSKQFKNKNYGKISRVERGIIVVRDAFVSGIGLRRPILLNSTLCFKMTRVCVRFKISLKQSGKK
        MHLRIHSGIFLGIIPTIQPIMDFDTILNEEFCLIECTSKQFKNKNYGKISRVERGIIVVRDAFVSGIGLRRPILLNSTLCFKMTRVCVRFKISLKQSGKK
Subjt:  MHLRIHSGIFLGIIPTIQPIMDFDTILNEEFCLIECTSKQFKNKNYGKISRVERGIIVVRDAFVSGIGLRRPILLNSTLCFKMTRVCVRFKISLKQSGKK

Query:  TSIRRTLFLVLRENRTKTSRGEIYFLVFIKSSKKMGQKHPIILIPKSSTHPETANLLDLDPSLLLSVCTMIGTPYTGSGSMYCWYSGAATSGAAISASSG
        TSIRRTLFLVLRENRTKTSRGEIYFLVFIKSSKKMGQKHPIILIPKSSTHPETANLLDLDPSLLLSVCTMIGTPYTGSGSMYCWYSGAATSGAAISASSG
Subjt:  TSIRRTLFLVLRENRTKTSRGEIYFLVFIKSSKKMGQKHPIILIPKSSTHPETANLLDLDPSLLLSVCTMIGTPYTGSGSMYCWYSGAATSGAAISASSG

Query:  CSGGGKIRSSSHGGSGGAEGWIAEEQWQVQQWQGGGGGGGKSLGSGIFFRFLDLDQNLSFFLAALSIVKRV
        CSGGGKIRSSSHGGSGGAEGWIAEEQWQVQQWQGGGGGGGKSLGSGIFFRFLDLDQNLSFFLAALSIVKRV
Subjt:  CSGGGKIRSSSHGGSGGAEGWIAEEQWQVQQWQGGGGGGGKSLGSGIFFRFLDLDQNLSFFLAALSIVKRV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTCGTATCCACAGTGGAATCTTTTTAGGCATTATTCCAACAATTCAACCCATTATGGACTTCGACACTATTTTGAATGAGGAGTTCTGTTTGATCGAATGCAC
TTCTAAACAGTTCAAGAATAAAAACTATGGTAAAATTTCGAGAGTGGAAAGAGGCATCATTGTTGTTCGAGATGCTTTCGTTTCTGGCATTGGACTGAGGCGTCCAATAC
TCTTAAACTCTACCCTTTGTTTCAAAATGACTCGAGTTTGTGTAAGATTCAAAATTTCATTAAAGCAATCTGGGAAAAAAACATCTATACGTAGGACTTTGTTTTTGGTA
TTGAGAGAAAATAGGACTAAAACTTCTAGAGGTGAAATTTATTTTCTTGTCTTTATAAAAAGTTCTAAGAAAATGGGACAGAAGCATCCAATTATTCTGATCCCCAAATC
ATCGACACATCCGGAAACCGCGAACCTTCTCGATCTCGATCCATCTCTTCTGCTATCTGTTTGCACGATGATCGGCACTCCGTACACCGGATCCGGATCCATGTATTGCT
GGTACAGCGGAGCGGCCACAAGCGGCGCTGCGATTTCTGCTTCCTCGGGATGTTCCGGTGGCGGAAAGATCCGATCGTCTAGCCATGGGGGAAGTGGCGGAGCTGAGGGC
TGGATTGCGGAGGAGCAGTGGCAAGTGCAGCAGTGGCAGGGCGGCGGCGGCGGCGGAGGGAAATCGTTGGGATCGGGGATTTTCTTCCGCTTCTTGGATCTGGACCAGAA
TTTGAGTTTCTTCTTGGCGGCCTTGAGCATTGTTAAGAGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCTTCGTATCCACAGTGGAATCTTTTTAGGCATTATTCCAACAATTCAACCCATTATGGACTTCGACACTATTTTGAATGAGGAGTTCTGTTTGATCGAATGCAC
TTCTAAACAGTTCAAGAATAAAAACTATGGTAAAATTTCGAGAGTGGAAAGAGGCATCATTGTTGTTCGAGATGCTTTCGTTTCTGGCATTGGACTGAGGCGTCCAATAC
TCTTAAACTCTACCCTTTGTTTCAAAATGACTCGAGTTTGTGTAAGATTCAAAATTTCATTAAAGCAATCTGGGAAAAAAACATCTATACGTAGGACTTTGTTTTTGGTA
TTGAGAGAAAATAGGACTAAAACTTCTAGAGGTGAAATTTATTTTCTTGTCTTTATAAAAAGTTCTAAGAAAATGGGACAGAAGCATCCAATTATTCTGATCCCCAAATC
ATCGACACATCCGGAAACCGCGAACCTTCTCGATCTCGATCCATCTCTTCTGCTATCTGTTTGCACGATGATCGGCACTCCGTACACCGGATCCGGATCCATGTATTGCT
GGTACAGCGGAGCGGCCACAAGCGGCGCTGCGATTTCTGCTTCCTCGGGATGTTCCGGTGGCGGAAAGATCCGATCGTCTAGCCATGGGGGAAGTGGCGGAGCTGAGGGC
TGGATTGCGGAGGAGCAGTGGCAAGTGCAGCAGTGGCAGGGCGGCGGCGGCGGCGGAGGGAAATCGTTGGGATCGGGGATTTTCTTCCGCTTCTTGGATCTGGACCAGAA
TTTGAGTTTCTTCTTGGCGGCCTTGAGCATTGTTAAGAGAGTTTGA
Protein sequenceShow/hide protein sequence
MHLRIHSGIFLGIIPTIQPIMDFDTILNEEFCLIECTSKQFKNKNYGKISRVERGIIVVRDAFVSGIGLRRPILLNSTLCFKMTRVCVRFKISLKQSGKKTSIRRTLFLV
LRENRTKTSRGEIYFLVFIKSSKKMGQKHPIILIPKSSTHPETANLLDLDPSLLLSVCTMIGTPYTGSGSMYCWYSGAATSGAAISASSGCSGGGKIRSSSHGGSGGAEG
WIAEEQWQVQQWQGGGGGGGKSLGSGIFFRFLDLDQNLSFFLAALSIVKRV