CuGenDBv2

Gene ID	Carg26189
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	late embryogenesis abundant protein 6-like isoform X1
Genome location	Carg_Chr16:9343850..9344194
RNA-Seq Expression	Carg26189
Synteny	Carg26189
Gene Ontology terms	GO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domains	IPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577696.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-50

100

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYPGHRI
        PIASPEGYYPGHRI
Subjt:  PIASPEGYYPGHRI

XP_022923386.1 late embryogenesis abundant protein 6-like isoform X1 [Cucurbita moschata]

5.7e-50

99.12

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHV+GHRLHHQPPVEGGSAANVPAY
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYPGHRI
        PIASPEGYYPGHRI
Subjt:  PIASPEGYYPGHRI

XP_022923387.1 late embryogenesis abundant protein 6-like isoform X2 [Cucurbita moschata]

5.3e-48

99.09

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Query:  MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIAS
        MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHV+GHRLHHQPPVEGGSAANVPAYPIAS
Subjt:  MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIAS

Query:  PEGYYPGHRI
        PEGYYPGHRI
Subjt:  PEGYYPGHRI

XP_022965230.1 late embryogenesis abundant protein 6-like isoform X1 [Cucurbita maxima]

6.9e-48

96.49

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSAMEKLSNMGSVAKKKLKICRAKL+EKVQKASAKTAEERKI EERRKAAEAE KRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVE GSAANVPAY
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYPGHRI
        PIASPEGYYPGHRI
Subjt:  PIASPEGYYPGHRI

XP_023553167.1 late embryogenesis abundant protein 6-like [Cucurbita pepo subsp. pepo]

8.2e-49

97.37

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQ+AMEKLSNMGSVAKKKLKICRAKLDE VQKAS KTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYPGHRI
        PIASPEGYYPGHRI
Subjt:  PIASPEGYYPGHRI

TrEMBL top hits

e value

%identity

Alignment

A0A5D3CHS9 Seed maturation protein

2.2e-39

82.64

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVL-GHRLHHQPPVEGGSA-----
        MQSAMEKLSNMGSVAK+KLKICRAKLDEKV+KAS KTAEERKI EERRKAA AEAKRELHEAKARHAAQKLR R+SHVL G  LHH  PVEGG+A     
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVL-GHRLHHQPPVEGGSA-----

Query:  -ANVPAYPIASPEGYYPGHRI
          NVPAYPIASPEGYYPGH+I
Subjt:  -ANVPAYPIASPEGYYPGHRI

A0A6J1E5Y8 late embryogenesis abundant protein 6-like isoform X2

2.6e-48

99.09

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Query:  MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIAS
        MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHV+GHRLHHQPPVEGGSAANVPAYPIAS
Subjt:  MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIAS

Query:  PEGYYPGHRI
        PEGYYPGHRI
Subjt:  PEGYYPGHRI

A0A6J1E6N7 late embryogenesis abundant protein 6-like isoform X1

2.7e-50

99.12

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHV+GHRLHHQPPVEGGSAANVPAY
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYPGHRI
        PIASPEGYYPGHRI
Subjt:  PIASPEGYYPGHRI

A0A6J1HL48 late embryogenesis abundant protein 6-like isoform X2

3.1e-46

96.36

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Query:  MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIAS
        MEKLSNMGSVAKKKLKICRAKL+EKVQKASAKTAEERKI EERRKAAEAE KRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVE GSAANVPAYPIAS
Subjt:  MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIAS

Query:  PEGYYPGHRI
        PEGYYPGHRI
Subjt:  PEGYYPGHRI

A0A6J1HN56 late embryogenesis abundant protein 6-like isoform X1

3.3e-48

96.49

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSAMEKLSNMGSVAKKKLKICRAKL+EKVQKASAKTAEERKI EERRKAAEAE KRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVE GSAANVPAY
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYPGHRI
        PIASPEGYYPGHRI
Subjt:  PIASPEGYYPGHRI

SwissProt top hits

e value

%identity

Alignment

Q39138 Late embryogenesis abundant protein 6

1.2e-13

47.27

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSA +K+S+M S AK+K+ IC+AK DEK ++A A+T EE++IA +RRKA EAEA  ++H AKA HA  KL  +QSH   H   H P V   +    PA 
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYP
         +    G+ P
Subjt:  PIASPEGYYP

Q96273 Late embryogenesis abundant protein 18

7.3e-08

48.15

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGH
        MQSA EK+S+M S AK+KL I  AK     +K  A+T +E+K+A+ER K+ EA+AK +LH++KA HAA   +    H+ GH
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGH

Arabidopsis top hits

e value

%identity

Alignment

AT1G32560.1 Late embryogenesis abundant protein, group 1 protein

8.2e-15

47.27

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY
        MQSA +K+S+M S AK+K+ IC+AK DEK ++A A+T EE++IA +RRKA EAEA  ++H AKA HA  KL  +QSH   H   H P V   +    PA 
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAY

Query:  PIASPEGYYP
         +    G+ P
Subjt:  PIASPEGYYP

AT2G35300.1 Late embryogenesis abundant protein, group 1 protein

5.2e-09

48.15

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Query:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGH
        MQSA EK+S+M S AK+KL I  AK     +K  A+T +E+K+A+ER K+ EA+AK +LH++KA HAA   +    H+ GH
Subjt:  MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGH

Sequences

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CDS sequence

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ATGCAGTCTGCAATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTCGACGAGAAGGTGCAAAAAGCGTCGGCGAAGAC
AGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCAGAGGCGAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTA
GGCAGTCACATGTACTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCT
GGACATAGAATTTAA

mRNA sequence

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Protein sequence

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MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIASPEGYYP
GHRI

Carg26189 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome