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Carg26219 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26219
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor TRY
Genome locationCarg_Chr15:7180364..7181051
RNA-Seq ExpressionCarg26219
SyntenyCarg26219
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016832.1 Transcription factor TRY [Cucurbita argyrosperma subsp. argyrosperma]1.7e-40100Show/hide
Query:  MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

KAG7035734.1 Transcription factor TRY [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3186.59Show/hide
Query:  MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MIF   L F  C   YLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]4.7e-30100Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_022973073.1 transcription factor TRY-like [Cucurbita maxima]4.7e-30100Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_023534743.1 transcription factor TRY-like isoform X1 [Cucurbita pepo subsp. pepo]6.5e-3284.15Show/hide
Query:  MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        + F +  PF + V  YLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY2.3e-30100Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

A0A5D3C2B2 Transcription factor TRY2.3e-30100Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

A0A6J1E339 transcription factor TRY-like1.9e-2998.44Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

A0A6J1IC17 transcription factor TRY-like2.3e-30100Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

I6NF75 R3 MYB transcription factor2.3e-30100Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.5e-1861.9Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

D3GKW6 MYB-like transcription factor TCL12.8e-1762.3Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKR
        EVSS +W+FI MT QEEDLI RM++L+GDRWDLIA R+ GR+ +EIERYWIM + + F  +
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKR

O22059 Transcription factor CPC1.7e-1966.67Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  RRR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

Q84RD1 MYB-like transcription factor ETC21.1e-1862.69Show/hide
Query:  YYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        Y   EVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F  +RR
Subjt:  YYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

Q8GV05 Transcription factor TRY9.8e-2373.02Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        EVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein8.0e-2062.69Show/hide
Query:  YYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        Y   EVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F  +RR
Subjt:  YYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

AT2G30424.1 Homeodomain-like superfamily protein1.0e-1961.9Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

AT2G30432.1 Homeodomain-like superfamily protein2.0e-1862.3Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKR
        EVSS +W+FI MT QEEDLI RM++L+GDRWDLIA R+ GR+ +EIERYWIM + + F  +
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKR

AT2G46410.1 Homeodomain-like superfamily protein1.2e-2066.67Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  RRR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

AT5G53200.1 Homeodomain-like superfamily protein7.0e-2473.02Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        EVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCT
TATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTG
AAGGGTTTGGAAAAAGAAGAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ACAAACTTACTTCCCAAAGTTTGGTGGGCAAAAGAACATATAGGCATTCACATAAACTTAAATTTCCCTGTGGATGTTTCAACCCTCCCTCTCATTACAGTTTTTCCTAA
ACTTCTGCCATCCTCAGTTCTCTATCTTCTTCCTGTTTCAGTGCTGCCTCTAATCTTTAGAGGAAACATGAACAATCATCGTCAGCAGAAACATGCCAAACTCCCTCCAC
TAGAATCTGAAGGTTTTAACTCGATTGTCTCTACTTTCCATGTCCTATTACTCAATCCTGGAATTCGTCTCTTCATGATCTTCTCACTTTCTAATGATATTTGAAGTCCT
ACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATA
AGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGA
AGAAGAGGATGAGAGAGACAGAGAGATAT
Protein sequenceShow/hide protein sequence
MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG