; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg26246 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26246
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionvacuolar protein sorting-associated protein 24 homolog 1
Genome locationCarg_Chr13:2056690..2060496
RNA-Seq ExpressionCarg26246
SyntenyCarg26246
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0032509 - endosome transport via multivesicular body sorting pathway (biological process)
GO:0045324 - late endosome to vacuole transport (biological process)
GO:0000815 - ESCRT III complex (cellular component)
GO:0005771 - multivesicular body (cellular component)
InterPro domainsIPR005024 - Snf7 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019271.1 Vacuolar protein sorting-associated protein 24-like 1 [Cucurbita argyrosperma subsp. argyrosperma]7.8e-62100Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

XP_022964906.1 vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita moschata]1.5e-6098.56Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

XP_022964907.1 vacuolar protein sorting-associated protein 24 homolog 1 isoform X2 [Cucurbita moschata]1.5e-6098.56Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

XP_022970267.1 vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita maxima]1.3e-5997.12Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEM TTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQP+RVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

XP_022970268.1 vacuolar protein sorting-associated protein 24 homolog 1 isoform X2 [Cucurbita maxima]1.3e-5997.12Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEM TTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQP+RVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

TrEMBL top hitse value%identityAlignment
A0A6J1DJ20 vacuolar protein sorting-associated protein 24 homolog 14.3e-5894.24Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGES+AIARTVGHLSKSAEVMKLVNNLMKAPEMA TM+EF KEMTKAGVIEEIVNDA++SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQPA VQEVR EEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

A0A6J1HIY4 vacuolar protein sorting-associated protein 24 homolog 1 isoform X27.2e-6198.56Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

A0A6J1HK92 vacuolar protein sorting-associated protein 24 homolog 1 isoform X17.2e-6198.56Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

A0A6J1HYM6 vacuolar protein sorting-associated protein 24 homolog 1 isoform X16.1e-6097.12Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEM TTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQP+RVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

A0A6J1I3E7 vacuolar protein sorting-associated protein 24 homolog 1 isoform X26.1e-6097.12Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEM TTMREF KEMTKAGVIEEIVNDAL+SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        MKQP+RVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

SwissProt top hitse value%identityAlignment
Q8CGS4 Charged multivesicular body protein 33.4e-1538.85Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        M +   +A+ R  G L KS EVMK + +L+K PE+  TMRE  KEM KAG+IEE++ D   S  D E++EE  E E+D++L  I      + P  V  + 
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        + +P     +   E    +  DDEE+LE +++RLA +RS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

Q9CQ10 Charged multivesicular body protein 31.2e-1539.57Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        M +   +A+ R  G L KS EVMK + +L+K PE+  TMRE  KEM KAG+IEE++ D   S  D E++EE  E E+D++L  I      + P  V  + 
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        + +P     +   EE   E  +DEE+LE +++RLA +RS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

Q9FFB3 Vacuolar protein sorting-associated protein 24 homolog 11.4e-5383.45Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGES+AIARTVGHLSKSAEVMKLVNNLMKAP+MA TM+EF KEMTKAGVIEE VN+A+++ALDSED+EEEI+EEVDKVLTAIAGETAA+LP AVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        +K PA+     REEEA+AEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

Q9LXH5 Putative vacuolar protein sorting-associated protein 24 homolog 25.3e-4575.54Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIA A TVG+LSKS EVMKLVN+LMKAPE+A TM+ F KEMTK GVIEE V+DA+++ALDSEDIEEEIEEEVDKVLTAIAGETAA+LPEAVRK++
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        M  PA+  E    E+AI EGVD EEELE IR RLA VRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

Q9Y3E7 Charged multivesicular body protein 32.6e-1542.07Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        M +   +A+ R  G L KS EVMK + +L+K PE+  TMRE  KEM KAG+IEE++ D   S  D E++EEE E E+D++L  I   TA  L +A     
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEE---AIAEGVDDEEE---LEEIRARLAKVRS
           P++V +   E E   A+A   D+EEE   LE +++RLA +RS
Subjt:  MKQPARVQEVRREEE---AIAEGVDDEEE---LEEIRARLAKVRS

Arabidopsis top hitse value%identityAlignment
AT3G45000.1 SNF7 family protein3.8e-4675.54Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIA A TVG+LSKS EVMKLVN+LMKAPE+A TM+ F KEMTK GVIEE V+DA+++ALDSEDIEEEIEEEVDKVLTAIAGETAA+LPEAVRK++
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        M  PA+  E    E+AI EGVD EEELE IR RLA VRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

AT3G45000.2 SNF7 family protein3.8e-4675.54Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGESIA A TVG+LSKS EVMKLVN+LMKAPE+A TM+ F KEMTK GVIEE V+DA+++ALDSEDIEEEIEEEVDKVLTAIAGETAA+LPEAVRK++
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        M  PA+  E    E+AI EGVD EEELE IR RLA VRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS

AT5G22950.1 SNF7 family protein9.9e-5583.45Show/hide
Query:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER
        MHLGES+AIARTVGHLSKSAEVMKLVNNLMKAP+MA TM+EF KEMTKAGVIEE VN+A+++ALDSED+EEEI+EEVDKVLTAIAGETAA+LP AVRKER
Subjt:  MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKER

Query:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS
        +K PA+     REEEA+AEGVDDEEELEEIRARLAKVRS
Subjt:  MKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCTTGGTGAAAGTATTGCCATTGCGAGAACAGTTGGGCATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAC
TACAATGCGAGAGTTTGGCAAGGAGATGACTAAGGCTGGGGTGATTGAGGAAATTGTAAATGATGCGTTGAATTCAGCACTGGATTCTGAGGATATTGAAGAGGAGATAG
AAGAGGAAGTTGACAAAGTTTTGACTGCCATCGCTGGTGAGACCGCTGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAGAATGAAGCAACCGGCTCGTGTGCAGGAAGTC
CGGAGAGAGGAAGAAGCAATAGCTGAGGGTGTTGACGATGAGGAAGAACTAGAAGAAATAAGGGCTCGGCTAGCAAAAGTTAGATCATAA
mRNA sequenceShow/hide mRNA sequence
GATCCTAAGATTCTCGAGGCTGCTCTATTCACTTCGATTCTACTGATCTTGAGGAAGTTCGGAATTCTTTGGTTTTCGAAGTTTCTGGTAGTGAAAAGGAGAGAAATGGA
GAAAATGATGAACGTCTTGAAGCCCAAACCAAATCCGCAGCAGCAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACTTTGAACGTCAAATTCGAGATA
TAGAGAGAGAAGAGAAAAATGTGCAGAAAGCCATTAAGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCCAAAGAAATTGTTAGGTCTAGAAAAACT
GTGAACCGTCTTCACGAAAATAAGGCATAGGTTAATTCGATATCCATGCACCTTGGTGAAAGTATTGCCATTGCGAGAACAGTTGGGCATCTTTCCAAGAGTGCTGAAGT
TATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAACTACAATGCGAGAGTTTGGCAAGGAGATGACTAAGGCTGGGGTGATTGAGGAAATTGTAAATGATG
CGTTGAATTCAGCACTGGATTCTGAGGATATTGAAGAGGAGATAGAAGAGGAAGTTGACAAAGTTTTGACTGCCATCGCTGGTGAGACCGCTGCACAGCTTCCAGAAGCT
GTCAGGAAGGAAAGAATGAAGCAACCGGCTCGTGTGCAGGAAGTCCGGAGAGAGGAAGAAGCAATAGCTGAGGGTGTTGACGATGAGGAAGAACTAGAAGAAATAAGGGC
TCGGCTAGCAAAAGTTAGATCATAAATTCGAAATTTCACATAAGAATGTCAAAATGGTCGTAACTCGGTTTGAGCCTCAACATTACATTACTTTTTTCCTGGTATTTTGT
GAGAGAGAAAATGAGTGACATACTGACCTTTGGCTGCATGTTTGTTCAATCAAGATTCATAAAACCAAGACTATATTTGTCAAATAGATAGGGACGGGGTGGAGCGGGGA
CTAACTGTTTGATGTATATTGTTTCTTCTTAAAAGAATGCAAATGAAGCATTGTTCTATCATCTTATATCTGTGTAAATGCAGTGTGTTTCTTTC
Protein sequenceShow/hide protein sequence
MHLGESIAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMREFGKEMTKAGVIEEIVNDALNSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKERMKQPARVQEV
RREEEAIAEGVDDEEELEEIRARLAKVRS