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Carg26250 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26250
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR72-like
Genome locationCarg_Chr13:1987827..1988258
RNA-Seq ExpressionCarg26250
SyntenyCarg26250
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583559.1 hypothetical protein SDJN03_19491, partial [Cucurbita argyrosperma subsp. sororia]1.9e-7499.3Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVP+DVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

KAG7019267.1 hypothetical protein SDJN02_18227, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-75100Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

XP_022964961.1 auxin-responsive protein SAUR72-like [Cucurbita moschata]1.6e-7398.6Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSS+NSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

XP_022970276.1 auxin-responsive protein SAUR72-like [Cucurbita maxima]1.2e-7398.6Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPS+ENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

XP_023520338.1 auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo]5.4e-7499.3Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

TrEMBL top hitse value%identityAlignment
A0A0A0LSM9 Uncharacterized protein1.1e-6488.11Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKS++MK+KN IKVVVEKLQKSLSRGRKP + +  EDFDE+VDST+VPEDVKEGHFAVVAVDG+ PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQP EVE ILAEQWKLESKRDSRDA TWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

A0A1S3CK34 auxin-responsive protein SAUR72-like5.5e-6487.41Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKS++MK+KN IKVVVEKLQKSLSRGRKP + +  EDFDE+VDST+VPEDVKEGHFAVVAVDGE P+RFVVPLSCLTHP FLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQP EVE ILAEQWKLESKRDSRDA TWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

A0A5D3DDN6 Auxin-responsive protein SAUR72-like5.5e-6487.41Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKS++MK+KN IKVVVEKLQKSLSRGRKP + +  EDFDE+VDST+VPEDVKEGHFAVVAVDGE P+RFVVPLSCLTHP FLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQP EVE ILAEQWKLESKRDSRDA TWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

A0A6J1HKE4 auxin-responsive protein SAUR72-like7.6e-7498.6Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSS+NSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

A0A6J1I062 auxin-responsive protein SAUR72-like5.8e-7498.6Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
        MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPS+ENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGA

Query:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
        LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY
Subjt:  LTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR362.2e-0937.08Show/hide
Query:  EDVKEGHFAVVAVDGEGP-KRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCK
        + V  GH A+     +G   R +VP+    HP+F  LL +A +EYGF HEG +TIPC   + E +   + ++ S   SR  F WG  C+
Subjt:  EDVKEGHFAVVAVDGEGP-KRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCK

O65695 Auxin-responsive protein SAUR501.0e-1153.23Show/hide
Query:  DSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC
        D   +P DV +GHF V    GE   R++VP+S LTHP F  LL++A EE+GFDH+  LTIPC
Subjt:  DSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC

P0DKL1 Auxin-responsive protein SAUR501.4e-1147.62Show/hide
Query:  DSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQ
        D + +P DV +GHF V    GE   R++VP+SCL HP F  LL+++ EE+GF+H+  + IPCQ
Subjt:  DSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQ

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 103.7e-0938.32Show/hide
Query:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENS--YEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHE
        MA  RS K  +     ++++ K  S  RK  + N   Y   D+      +P+DV +GHF V    G    R++VP+S L H  F  LL  A EE+GFDH+
Subjt:  MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENS--YEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHE

Query:  GALTIPC
          LTIPC
Subjt:  GALTIPC

Q9ZUZ3 Auxin-responsive protein SAUR321.3e-0943.28Show/hide
Query:  EDVKEGHFAV-VAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILA
        +DV +G  A+ V   GE  +RF+VP+    HP+F++LL++A +EYGFD +G +TIPC   E   + A
Subjt:  EDVKEGHFAV-VAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILA

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family1.1e-1343Show/hide
Query:  VVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENIL
        ++ + L++  S G+K SSE  Y D  E  D  S+P DV +GHF V    G    R+V+P+S LT P F  LL+QA EE+GFDH   LTIPC+    ++++
Subjt:  VVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENIL

AT2G21220.1 SAUR-like auxin-responsive protein family4.3e-1349.25Show/hide
Query:  DEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQ
        ++  D   +P DV +GHF V    GE   R++VP+S LTHP F  LL+QA EE+GF+H+  LTIPC+
Subjt:  DEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQ

AT2G28085.1 SAUR-like auxin-responsive protein family1.6e-2351.59Show/hide
Query:  MAKSRSMKRKNG----IKVVVEKLQ--KSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDG--EGPKRFVVPLSCLTHPMFLRLLEQAAEE
        M    S K+K G    +K VVE+L   K  S  +KP  E    D         VP+DVKEGHFAV+AVDG  E  +RFVVPL  L HPMF +LLEQA EE
Subjt:  MAKSRSMKRKNG----IKVVVEKLQ--KSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDG--EGPKRFVVPLSCLTHPMFLRLLEQAAEE

Query:  YGFDHEGALTIPCQPCEVENILAEQW
        YGF H+GAL +PC+P  +  IL EQW
Subjt:  YGFDHEGALTIPCQPCEVENILAEQW

AT3G09870.1 SAUR-like auxin-responsive protein family1.8e-1951.96Show/hide
Query:  KVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTS-VPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVEN
        K+ + KLQ      R      +Y +F+E  ++ S +P DVKEGH AV+AV GE  KRFV+ L  L  P FLRLLEQA EE+GF   G LTIPCQP EV+ 
Subjt:  KVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTS-VPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVEN

Query:  IL
        IL
Subjt:  IL

AT4G34760.1 SAUR-like auxin-responsive protein family7.4e-1353.23Show/hide
Query:  DSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC
        D   +P DV +GHF V    GE   R++VP+S LTHP F  LL++A EE+GFDH+  LTIPC
Subjt:  DSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTCTAGAAGCATGAAGAGAAAGAACGGTATCAAGGTCGTCGTTGAGAAGTTGCAAAAGAGCCTATCTCGAGGTCGAAAACCGAGTAGTGAGAATAGTTATGA
GGATTTCGATGAAGTTGTGGACTCGACGTCGGTACCAGAGGACGTGAAAGAAGGGCATTTTGCAGTGGTGGCGGTGGACGGGGAGGGGCCGAAACGATTCGTTGTTCCGT
TGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCATGTCAGCCATGTGAGGTT
GAGAATATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATGCATTTACTTGGGGAACTTTGTGTAAAGCCATTATTCAAAGTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGTCTAGAAGCATGAAGAGAAAGAACGGTATCAAGGTCGTCGTTGAGAAGTTGCAAAAGAGCCTATCTCGAGGTCGAAAACCGAGTAGTGAGAATAGTTATGA
GGATTTCGATGAAGTTGTGGACTCGACGTCGGTACCAGAGGACGTGAAAGAAGGGCATTTTGCAGTGGTGGCGGTGGACGGGGAGGGGCCGAAACGATTCGTTGTTCCGT
TGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCATGTCAGCCATGTGAGGTT
GAGAATATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATGCATTTACTTGGGGAACTTTGTGTAAAGCCATTATTCAAAGTTATTGA
Protein sequenceShow/hide protein sequence
MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEV
ENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY