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Carg26269 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg26269
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCopper ion binding protein
Genome locationCarg_Chr18:7445008..7447671
RNA-Seq ExpressionCarg26269
SyntenyCarg26269
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573626.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5199.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAA IFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

KAG7012707.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-52100Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

XP_022945209.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita moschata]8.0e-5299.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

XP_022967119.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima]4.0e-5198.28Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASS SGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

XP_023542814.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita pepo subsp. pepo]2.3e-5198.28Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAA RTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

TrEMBL top hitse value%identityAlignment
A0A0A0LT33 Uncharacterized protein4.3e-4387.18Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGA-STEKISSDKYRNYAVVAGTVTIFG
        MAAARTAARIFSRRFS  GKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEK  ESVA+S+PS S++S SGA STEKIS+DK RNYAVVAGTVTI G
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGA-STEKISSDKYRNYAVVAGTVTIFG

Query:  ALGWYLKSKKKPEEVHD
        ALGWYLKSKKKPEEVHD
Subjt:  ALGWYLKSKKKPEEVHD

A0A1S3CEE3 uncharacterized protein At2g27730, mitochondrial9.6e-4382.4Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEK  ESVA+S+PS SAS         S SGAS+EKIS+DK RNYAVV
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV

Query:  AGTVTIFGALGWYLKSKKKPEEVHD
        AGTVTI GALGWYLKSKKKPEEVHD
Subjt:  AGTVTIFGALGWYLKSKKKPEEVHD

A0A5A7T219 Uncharacterized protein9.6e-4382.4Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEK  ESVA+S+PS SAS         S SGAS+EKIS+DK RNYAVV
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV

Query:  AGTVTIFGALGWYLKSKKKPEEVHD
        AGTVTI GALGWYLKSKKKPEEVHD
Subjt:  AGTVTIFGALGWYLKSKKKPEEVHD

A0A6J1G0C8 uncharacterized protein At2g27730, mitochondrial3.9e-5299.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

A0A6J1HVU8 uncharacterized protein At2g27730, mitochondrial1.9e-5198.28Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASS SGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

SwissProt top hitse value%identityAlignment
Q9ZUX4 Uncharacterized protein At2g27730, mitochondrial4.3e-2459.82Show/hide
Query:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG
        A R A RI SRRFS SGK+LSEEE+AAEN++IKK+EQEKL+KLAR+G  P E+   S +E+  +G+ +S S  S  K+S DK RNYAVVAG V I G++G
Subjt:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG

Query:  WYLKS--KKKPE
        WYLK+  KK+PE
Subjt:  WYLKS--KKKPE

Arabidopsis top hitse value%identityAlignment
AT2G27730.1 copper ion binding3.1e-2559.82Show/hide
Query:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG
        A R A RI SRRFS SGK+LSEEE+AAEN++IKK+EQEKL+KLAR+G  P E+   S +E+  +G+ +S S  S  K+S DK RNYAVVAG V I G++G
Subjt:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG

Query:  WYLKS--KKKPE
        WYLK+  KK+PE
Subjt:  WYLKS--KKKPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAAT
TGAACAAGAGAAATTGGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGGAGTCTATTCCAAGTGGGTCAGCCTCCTCAGGGTCAG
GAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAG
CCAGAGGAAGTCCACGACTGA
mRNA sequenceShow/hide mRNA sequence
TTGAGAGGTTTGATCTCCGCTCGTTTCGCCTTCGGGAATTTTACATCAACAAATCCCCATTCCGCTTCCTCCAAATCAATTTCCACCGCTTTCTTCCTACAACTCTCTCT
CTACCTCTCCTTCTTTCGGAAACGCGATCTATCGAAATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGA
AGAAAAGGCTGCTGAGAATATCTACATCAAGAAAATTGAACAAGAGAAATTGGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGG
AGTCTATTCCAAGTGGGTCAGCCTCCTCAGGGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTT
GGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCACGACTGAGATAGCTAACAGCATGTAGTCTTTCCATATCATCAGGATCTGGAGGGAGGGAG
GAGTTTGAGTGGTGTTCTCTTTTCCTCTGCTGAATAATCCAGAAATCGAGATGCATGTTGGCTCTTGGTTTATGAATACATTCTGTTCAGATTTACGTTTCTCTCTGGAT
AATGGGTTTCTTTTCACCCTTATTTCTTTCTCTTGAAAATTAACAAACAGTGAGTTAGAGAC
Protein sequenceShow/hide protein sequence
MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKK
PEEVHD